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KYF_008481-T1, KYF_008481-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_008481-T1
Unique NameKYF_008481-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3848735..3849770-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_008481-T1 ID=KYF_008481-T1|Name=KYF_008481-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1036bp|location=Sequence derived from alignment at ch6:3848735..3849770- (Aspergillus niger KYF3)
ATGCCTGCCGAGCAGTCTGCGGCCAGCCCTTCTGGCGCCAAGGAAATCTC
CAAGCCGTCCGCAGAGAATGACCAAGCCGGCGATGATCGCAACGAACCTA
CATCGCCTTCAAAAGAGAAGACGAAGGGAAAATCAGGTGAAGAGGCTAGC
GTGGATGAGGCCAGTACGGACCAAAAAGACGATGATGCTGCTTCGAGAGC
CCGCCAACGACAAGAAAGGTTCAAGGCTCTCCAGGCTCGCGCAGTAAGTT
CATGATAGCGAAGATTCATTGTGCGCTGTGTTCATACTGACATAGTTTTA
GAAAACCGCTACCGAGCGGAATCTGAAAGAAACGGCTGCCGAAACACAGC
GTCTCGCAACCGATCCGTCGCTGCTTTCCTCGCTCTCTCGCAAACATGCT
TTCGCATCGCATAACCTTCTCAAGGCTGACACAGAAGCCGCTGGCGAGGA
CTTCGAACGTAAGCGTGCATGGGACTGGACTGTCGATGAGTCCGAAAAAT
GGGACAAGCGCATGGAAAAGAAGCAGCGTCATCGGGACAATGTCGCATTC
CAGGACTACACCCAAGACGCGCGAAAAGTGTATAAGAGACAGCTGCGGGA
AGTACAGCCTGACCTTGAAACCTACGAGAGGGAGAAGATGGCAGCGATCG
AAAAGGCTGCTGCCAATGGCGATCTCGAGATCGTTGAGACCAACGACGGT
GAAATGATCGCCGTCGATAAGAACGGCTCTTTCTACTCTACAGCTGACAG
TGTTGGCTTTACGGAGAACAAGCCCGACAGAGCTGCTGTTGACAAGCTCG
TGGATAATCTTCGGAAAGCCGAGGAAGTCCGACTCAAGAAGCGGAGGGAC
CGCCGCGGAGACGATGACGGCGACGTCACTTACATCAACGAAAAGAACAA
GCAGTTCAACCAGAAATTATCAAGATTCTATAATAAGGTGAGTTTTCACT
CTGCCATTTGTCAAAGGGGCTAGCTAATTGTTTTCCAGTACACTACGGAG
ATTCGCGACAGCTTCGAGCGTGGTACGATGATCTGA
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Coding sequence (CDS) from alignment at ch6:3848735..3849770-

>KYF_008481-T1 ID=KYF_008481-T1|Name=KYF_008481-T1|organism=Aspergillus niger KYF3|type=CDS|length=2781bp|location=Sequence derived from alignment at ch6:3848735..3849770- (Aspergillus niger KYF3)
TACACTACGGAGATTCGCGACAGCTTCGAGCGTGGTACGATGATCTGAAA
AACCGCTACCGAGCGGAATCTGAAAGAAACGGCTGCCGAAACACAGCGTC
TCGCAACCGATCCGTCGCTGCTTTCCTCGCTCTCTCGCAAACATGCTTTC
GCATCGCATAACCTTCTCAAGGCTGACACAGAAGCCGCTGGCGAGGACTT
CGAACGTAAGCGTGCATGGGACTGGACTGTCGATGAGTCCGAAAAATGGG
ACAAGCGCATGGAAAAGAAGCAGCGTCATCGGGACAATGTCGCATTCCAG
GACTACACCCAAGACGCGCGAAAAGTGTATAAGAGACAGCTGCGGGAAGT
ACAGCCTGACCTTGAAACCTACGAGAGGGAGAAGATGGCAGCGATCGAAA
AGGCTGCTGCCAATGGCGATCTCGAGATCGTTGAGACCAACGACGGTGAA
ATGATCGCCGTCGATAAGAACGGCTCTTTCTACTCTACAGCTGACAGTGT
TGGCTTTACGGAGAACAAGCCCGACAGAGCTGCTGTTGACAAGCTCGTGG
ATAATCTTCGGAAAGCCGAGGAAGTCCGACTCAAGAAGCGGAGGGACCGC
CGCGGAGACGATGACGGCGACGTCACTTACATCAACGAAAAGAACAAGCA
GTTCAACCAGAAATTATCAAGATTCTATAATAAGATGCCTGCCGAGCAGT
CTGCGGCCAGCCCTTCTGGCGCCAAGGAAATCTCCAAGCCGTCCGCAGAG
AATGACCAAGCCGGCGATGATCGCAACGAACCTACATCGCCTTCAAAAGA
GAAGACGAAGGGAAAATCAGGTGAAGAGGCTAGCGTGGATGAGGCCAGTA
CGGACCAAAAAGACGATGATGCTGCTTCGAGAGCCCGCCAACGACAAGAA
AGGTTCAAGGCTCTCCAGGCTCGCGCATACACTACGGAGATTCGCGACAG
CTTCGAGCGTGGTACGATGATCTGAAAAACCGCTACCGAGCGGAATCTGA
AAGAAACGGCTGCCGAAACACAGCGTCTCGCAACCGATCCGTCGCTGCTT
TCCTCGCTCTCTCGCAAACATGCTTTCGCATCGCATAACCTTCTCAAGGC
TGACACAGAAGCCGCTGGCGAGGACTTCGAACGTAAGCGTGCATGGGACT
GGACTGTCGATGAGTCCGAAAAATGGGACAAGCGCATGGAAAAGAAGCAG
CGTCATCGGGACAATGTCGCATTCCAGGACTACACCCAAGACGCGCGAAA
AGTGTATAAGAGACAGCTGCGGGAAGTACAGCCTGACCTTGAAACCTACG
AGAGGGAGAAGATGGCAGCGATCGAAAAGGCTGCTGCCAATGGCGATCTC
GAGATCGTTGAGACCAACGACGGTGAAATGATCGCCGTCGATAAGAACGG
CTCTTTCTACTCTACAGCTGACAGTGTTGGCTTTACGGAGAACAAGCCCG
ACAGAGCTGCTGTTGACAAGCTCGTGGATAATCTTCGGAAAGCCGAGGAA
GTCCGACTCAAGAAGCGGAGGGACCGCCGCGGAGACGATGACGGCGACGT
CACTTACATCAACGAAAAGAACAAGCAGTTCAACCAGAAATTATCAAGAT
TCTATAATAAGATGCCTGCCGAGCAGTCTGCGGCCAGCCCTTCTGGCGCC
AAGGAAATCTCCAAGCCGTCCGCAGAGAATGACCAAGCCGGCGATGATCG
CAACGAACCTACATCGCCTTCAAAAGAGAAGACGAAGGGAAAATCAGGTG
AAGAGGCTAGCGTGGATGAGGCCAGTACGGACCAAAAAGACGATGATGCT
GCTTCGAGAGCCCGCCAACGACAAGAAAGGTTCAAGGCTCTCCAGGCTCG
CGCATACACTACGGAGATTCGCGACAGCTTCGAGCGTGGTACGATGATCT
GAAAAACCGCTACCGAGCGGAATCTGAAAGAAACGGCTGCCGAAACACAG
CGTCTCGCAACCGATCCGTCGCTGCTTTCCTCGCTCTCTCGCAAACATGC
TTTCGCATCGCATAACCTTCTCAAGGCTGACACAGAAGCCGCTGGCGAGG
ACTTCGAACGTAAGCGTGCATGGGACTGGACTGTCGATGAGTCCGAAAAA
TGGGACAAGCGCATGGAAAAGAAGCAGCGTCATCGGGACAATGTCGCATT
CCAGGACTACACCCAAGACGCGCGAAAAGTGTATAAGAGACAGCTGCGGG
AAGTACAGCCTGACCTTGAAACCTACGAGAGGGAGAAGATGGCAGCGATC
GAAAAGGCTGCTGCCAATGGCGATCTCGAGATCGTTGAGACCAACGACGG
TGAAATGATCGCCGTCGATAAGAACGGCTCTTTCTACTCTACAGCTGACA
GTGTTGGCTTTACGGAGAACAAGCCCGACAGAGCTGCTGTTGACAAGCTC
GTGGATAATCTTCGGAAAGCCGAGGAAGTCCGACTCAAGAAGCGGAGGGA
CCGCCGCGGAGACGATGACGGCGACGTCACTTACATCAACGAAAAGAACA
AGCAGTTCAACCAGAAATTATCAAGATTCTATAATAAGATGCCTGCCGAG
CAGTCTGCGGCCAGCCCTTCTGGCGCCAAGGAAATCTCCAAGCCGTCCGC
AGAGAATGACCAAGCCGGCGATGATCGCAACGAACCTACATCGCCTTCAA
AAGAGAAGACGAAGGGAAAATCAGGTGAAGAGGCTAGCGTGGATGAGGCC
AGTACGGACCAAAAAGACGATGATGCTGCTTCGAGAGCCCGCCAACGACA
AGAAAGGTTCAAGGCTCTCCAGGCTCGCGCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYF2KYF_008481Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_008481-T1KYF_008481-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008481-T1.cdsKYF_008481-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008481-T1.exon3KYF_008481-T1.exon3Aspergillus niger KYF3exon
KYF_008481-T1.exon2KYF_008481-T1.exon2Aspergillus niger KYF3exon
KYF_008481-T1.exon1KYF_008481-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR013260
DBxrefPFAM:PF08231
Productpre-mRNA-splicing factor syf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3848735..3849770 -
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