You are here

Home

KYF_008533-T1, KYF_008533-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_008533-T1
Unique NameKYF_008533-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4150246..4152568-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_008533-T1 ID=KYF_008533-T1|Name=KYF_008533-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2323bp|location=Sequence derived from alignment at ch6:4150246..4152568- (Aspergillus niger KYF3)
ATGGCAGGCTCAATGTCTGGTCTCAGCTCTCCTTTGATGCCATGCGACCG
CTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGC
TCGTGGGGTTCGTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCT
GTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGA
GGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGAT
ACCGGGAGCTGGAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCC
ACAGGATGTGTAATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCA
GCAGCAGGTGCTTTTGAAGGAGTTTGCACAGAACCATCCCGTGGTGTATG
TCAGACGCGACAGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCT
GACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATG
CTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACT
ATGCTGGTCGCCCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGA
GTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCT
CTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGC
CGCTAACCTGGCTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGC
GCTGACGCGGTTACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAA
TGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGC
ATACTCGGATTCCAATATTCATCGAGATTTCGCAGTCAGATGCTAGACGC
GGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATG
TCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACA
CTAAGATCATTGCCACCTATCAGTCAACCTCCTTGGCTAGGGACCAGAGT
ATCCTTCCTGAAATACGTTCTCTTCTGGAGAATTCAGAAGAGCAAGGGTT
CGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGA
ATCTTACTTTGCAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACC
GTATACCATAGTGGGCCACTCGGACGAGCATCTATATGTCTAAATCCCAT
TCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCA
CACTCGCATCGGCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAA
CAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGC
AATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACA
TATTATGCAGTGATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCA
GAGCATGGAGGAATAGCTGTAACACTACCATACAAAACGGACGTCCTCCC
ATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACA
CGGTGGTCATCGAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTC
CTTAAAGGCTACAACACAGATTATCTCGGGATCCGCGACTGCATCAACAA
ACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAA
TAGGCGCAGGCGGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTC
GGCGTCCGCCAGATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAA
GCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGA
AGATCGAGATTCTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGT
CAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTT
GAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGA
CTGGGGGTGTTTTCATTGATGTATGTGTTCTCAAATACCCTGATTTTTTA
ATGAGAGGTGCTAACTGGACAGGTGGCGTATGGAATGCCGCAGACCAAGC
TGAGAATTGGTATGAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGAT
GGTCTGGTGGTGTTGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTAC
AAGGAGGCCGGCGCCGGTGCATGTGATGAGGGGGGTATTGAGGGAGTATA
CTAATGCAACACTTAGCAGGTAG
back to top

Coding sequence (CDS) from alignment at ch6:4150246..4152568-

>KYF_008533-T1 ID=KYF_008533-T1|Name=KYF_008533-T1|organism=Aspergillus niger KYF3|type=CDS|length=4542bp|location=Sequence derived from alignment at ch6:4150246..4152568- (Aspergillus niger KYF3)
GTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACG
AGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGC
AGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGCCGGTGCAT
GTGATGAGGGGGGTATTGAGGGAGTATACTAATGCAACACTTAGCAGGTA
GATGGCAGGCTCAATGTCTGGTCTCAGCTCTCCTTTGATGCCATGCGACC
GCTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTG
CTCGTGGGGTTCGTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATC
TGTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGG
AGGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGA
TACCGGGAGCTGGAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTC
CACAGGATGTGTAATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCC
AGCAGCAGGTGCTTTTGAAGGAGTTTGCACAGAACCATCCCGTGGTGTAT
GTCAGACGCGACAGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCC
TGACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCAT
GCTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGAC
TATGCTGGTCGCCCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACG
AGTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGC
TCTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTG
CCGCTAACCTGGCTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGG
CGCTGACGCGGTTACTATTGTGATTGACGGGGGAGTCGGTGATAATTACA
ATGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAG
CATACTCGGATTCCAATATTCATCGAGATTTCGCAGTCAGATGCTAGACG
CGGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCAT
GTCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCAC
ACTAAGATCATTGCCACCTATCAGTCAACCTCCTTGGCTAGGGACCAGAG
TATCCTTCCTGAAATACGTTCTCTTCTGGAGAATTCAGAAGAGCAAGGGT
TCGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACG
AATCTTACTTTGCAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAAC
CGTATACCATAGTGGGCCACTCGGACGAGCATCTATATGTCTAAATCCCA
TTCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTC
ACACTCGCATCGGCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAA
ACAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAG
CAATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAAC
ATATTATGCAGTGATCACTTCTCCGACATCCACAAACTCCTAAACAGCGC
AGAGCATGGAGGAATAGCTGTAACACTACCATACAAAACGGACGTCCTCC
CATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAAC
ACGGTGGTCATCGAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGT
CCTTAAAGGCTACAACACAGATTATCTCGGGATCCGCGACTGCATCAACA
AACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTA
ATAGGCGCAGGCGGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCT
CGGCGTCCGCCAGATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGA
AGCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTG
AAGATCGAGATTCTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCG
TCAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGT
TGAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACG
ACTGGGGGTGTTTTCATTGATGTGGCGTATGGAATGCCGCAGACCAAGCT
GAGAATTGGTATGAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGATG
GTCTGGTGGTGTTGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTACA
AGGAGGCCGGCGCCGGTGCATGTGATGAGGGGGGTATTGAGGGAGTATAC
TAATGCAACACTTAGCAGGTAGATGGCAGGCTCAATGTCTGGTCTCAGCT
CTCCTTTGATGCCATGCGACCGCTCTGTCTCCATCCCTTGTCGGCGATAC
GATGCGGATGCCACCCTGTTGCTCGTGGGGTTCGTCGGTGCCGGAAAGAA
GACCCTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGATTTATTGATT
TCGATGCTGTATTTCGTCAGGAGGTGCACTTATCTCCCCAGGAGTACATT
GCACAAAATGGTCCCGCGCGATACCGGGAGCTGGAGCTGAAATTGACTCG
CACTCTGCTAGATAAATGCTCCACAGGATGTGTAATTACCATCTCGGGCG
TGGGATGGTCGGCAAATCGCCAGCAGCAGGTGCTTTTGAAGGAGTTTGCA
CAGAACCATCCCGTGGTGTATGTCAGACGCGACAGGGTGGATCTTCAACA
GTTCATCATGACCACTAGCCCTGACAAGTTCAACCGGATCTTTGAAGCGG
GCAATGAGTTCTTCCAGTCATGCTCCAGCTTTGACTTTTTCAATCACACA
CAGGAAGACAAGTTGACAGACTATGCTGGTCGCCCACTCCCGGCGTATAT
CAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTGCATCAGGTCT
TCGGTCGTGCTTATCATGTGCTCTATTCTTCGGACCCGTTTTCACCGTCT
CATACATATGCGCTACAGGTGCCGCTAACCTGGCTGGACTGCAATCCGGA
CCTGGAACTATTGGAGAGTGGCGCTGACGCGGTTACTATTGTGATTGACG
GGGGAGTCGGTGATAATTACAATGCCCGATTCCTGGAAAGAATTGCCAAG
CACATGGCGACGATCCGGAAGCATACTCGGATTCCAATATTCATCGAGAT
TTCGCAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATGCTGCTTCGAC
TCGCACCCGATGCTGTGGCATGTCCTGTTGACGGCTGCGAATTTAGCAGA
TTAAAGTTGGCTAAAGGCCACACTAAGATCATTGCCACCTATCAGTCAAC
CTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGTTCTCTTCTGG
AGAATTCAGAAGAGCAAGGGTTCGATGCCTTTCGCGTTACTATAGAGCCC
AGCTTCCCAGGGGATCTCACGAATCTTACTTTGCAGCAACGGCTGGGTGA
GGTAACAGACATTCCCATAACCGTATACCATAGTGGGCCACTCGGACGAG
CATCTATATGTCTAAATCCCATTCTCTCGCCAGTGGTCCTCCCATCTCTT
CCGGATAGTGCCACAGGGGTCACACTCGCATCGGCCCAGCAAGCACTTAC
ATCCTGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTCGGCCAAAAAG
TCCAAAACAGTCTCTCACCAGCAATGCACAATGCAGCCTACTCTGCCTGC
GGTCTACCACACGCCTACAACATATTATGCAGTGATCACTTCTCCGACAT
CCACAAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCTGTAACACTAC
CATACAAAACGGACGTCCTCCCATTACTAGACGAAGTCAGCCCAGATGCC
CAGGACATCCACGCCGTAAACACGGTGGTCATCGAGCACCGAAATAGCAG
TACCAACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACAGATTATCTCG
GGATCCGCGACTGCATCAACAAACACCTCTCTCCCGCCAATGCCATCCGA
CACGGCACCACAGCCTTGGTAATAGGCGCAGGCGGAATGGCCCGCGCAGC
CATCTATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGCATCTATAACC
GGACTGTTTCGAATGCGCAGAAGCTAGCTGACTATTATACCCGGTGGGCT
GAGAGGAATAATACCCATCTGAAGATCGAGATTCTGCGATCGAGTGACGA
CGCCTGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTTGCGTGTTTGC
CGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTATTACGATGGAGGTGCCG
GAGCAGTGGTTGAGGAGTACGACTGGGGGTGTTTTCATTGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004764shikimate 3-dehydrogenase (NADP+) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_008533KYF_008533Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_008533-T1KYF_008533-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008533-T1.cdsKYF_008533-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008533-T1.exon2KYF_008533-T1.exon2Aspergillus niger KYF3exon
KYF_008533-T1.exon1KYF_008533-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006151
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR013708
DBxrefInterPro:IPR041121
DBxrefInterPro:IPR031322
DBxrefPFAM:PF01202
DBxrefPFAM:PF08501
DBxrefPFAM:PF18317
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4150246..4152568 -
Powered by Drupal