You are here

Home

KYF_008669-T1, KYF_008669-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_008669-T1
Unique NameKYF_008669-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4548311..4549918-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_008669-T1 ID=KYF_008669-T1|Name=KYF_008669-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1608bp|location=Sequence derived from alignment at ch6:4548311..4549918- (Aspergillus niger KYF3)
ATGTCTCAAGAAGTCAAGGACAAAGGTCCTCAGGAGGTTGTGCACACAAT
CGAGCTGGGCTCCCTCGGGGGCAATTCCAGCAGTGCCAGCCTCCAGCCAC
TCTCTCAAACGCCATCAGAGGCGCCGCCTCCGCCTCCGCCCCATACGGTG
TTGACGGAAAAGAAGAAGATCATGACCATTGCTATAGCGGCCATCGTGGG
ATTCTTAGCTCCGGTGTCAGCAAACATCTACTATCCCGCCATCGACCAAC
TATCCGACGATTTGCATGTCTCCGTCAGCAAAATCAACTTGACCATCACC
ACGTACATGGTAAGATCCTATCCCGGATCCGGGAAGCTGTGTAGCATAAG
CTAACATAGAGTATATCAGATCTTCCAAGGAGTTGCGCCGTTGGTGACGG
GTAGTATTTCCGATGTGTATGGCCGGCGACCCACGATGCTGGTCTGTCTG
ATCACGTACCTCGCCGTCAATATCGGCCTGGCGCTGCAAGACAACTACAT
TGCGCTCATTGTCCTCAGAACCTTCCAAAGTTGCGGAAGCAGTGCCATTT
CAGTCGTTGGCATGGCTGTCACGGCCGACGTGGTGACTAGAAGCGAGCGT
GGCAAATACATGATCTACTCGTCCCTGGGGATAACAATGGGACCTGCACT
GGGACCTATTATTGGAGGTGTCCTGGCCCAGTTTCTCGACTGGCGAAGTA
TCTTCTGGTTCCTGGCCATCTTTGCCGCAGCGATGATAGTCCTGATCCTT
GTCTGCTTCCCTGAAACCTGCCGCATGGTGGTAGGAAATGGATCCATTCC
CGCGCCGCGATGGAATAGGCCACTCATTCCGATCGTGGAGCCCTCAGCCT
ATGAGGGGGCTGAGGCGGCTAAGAAAGAGCTGGAAGACGGGCCTAAGCCC
CGTCGACCGACACCGATAGACAGCATCAAGATCGCCTTGGAAAAGGAAAC
TGGCGCCATCATCGCTTTCTGCGCCATTCTCTACTGTGGGTACTTTGCTG
TTCTCAGTAGTTTGTCTTCGGAGTTGGGAGATAAGTACGGCTACAACTCG
CTCCAGATTGGCCTGTGCTATATCCCGTACGGCATCGGCAGTCTCACCTC
ACGGTGGACCGTTGGACGATTTGTGGACTGGAATTTCCGTCGCGTAGGGC
GGCAGCATGGCTTGGAGGTGTCTAGCAATCGCCAGATGGACCTCGTTGAG
TTTCCTCTCGAAAAGGCCCGTCTCCAGATCACATTGCCGATGGTCTATAT
GTCCTGCATCTGCATCATTGGCTACGGCTGGGTCATGAATTACCGGACTC
ATGTGGCTGGACCGCTTGTTATGCTGTTTTTCACGGCGCATACCATCTCG
GGAGCCACCAGCATCCTGGTCACCCTGCTGATCGACTGCCACGTCAAGCG
GGCAGCGACAGTCACAGCTTCCAACACGATGTTCCGTTGCTTTCTGGGCG
CGGGGGCGGTTGCAGCTGCAGTGCCTATCATTGACGCAATCGGTATGGGC
TGGATGGGGACCCTGATTGCTGTCCTGTGGGCAGTTTCCAGCGTACTTCT
CTGGGGTGTTCTAGTCTGGGGCCACGACTACCGCAAGAAGCTGGCGGGGA
GGATCTGA
back to top

Coding sequence (CDS) from alignment at ch6:4548311..4549918-

>KYF_008669-T1 ID=KYF_008669-T1|Name=KYF_008669-T1|organism=Aspergillus niger KYF3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch6:4548311..4549918- (Aspergillus niger KYF3)
ATCTTCCAAGGAGTTGCGCCGTTGGTGACGGGTAGTATTTCCGATGTGTA
TGGCCGGCGACCCACGATGCTGGTCTGTCTGATCACGTACCTCGCCGTCA
ATATCGGCCTGGCGCTGCAAGACAACTACATTGCGCTCATTGTCCTCAGA
ACCTTCCAAAGTTGCGGAAGCAGTGCCATTTCAGTCGTTGGCATGGCTGT
CACGGCCGACGTGGTGACTAGAAGCGAGCGTGGCAAATACATGATCTACT
CGTCCCTGGGGATAACAATGGGACCTGCACTGGGACCTATTATTGGAGGT
GTCCTGGCCCAGTTTCTCGACTGGCGAAGTATCTTCTGGTTCCTGGCCAT
CTTTGCCGCAGCGATGATAGTCCTGATCCTTGTCTGCTTCCCTGAAACCT
GCCGCATGGTGGTAGGAAATGGATCCATTCCCGCGCCGCGATGGAATAGG
CCACTCATTCCGATCGTGGAGCCCTCAGCCTATGAGGGGGCTGAGGCGGC
TAAGAAAGAGCTGGAAGACGGGCCTAAGCCCCGTCGACCGACACCGATAG
ACAGCATCAAGATCGCCTTGGAAAAGGAAACTGGCGCCATCATCGCTTTC
TGCGCCATTCTCTACTGTGGGTACTTTGCTGTTCTCAGTAGTTTGTCTTC
GGAGTTGGGAGATAAGTACGGCTACAACTCGCTCCAGATTGGCCTGTGCT
ATATCCCGTACGGCATCGGCAGTCTCACCTCACGGTGGACCGTTGGACGA
TTTGTGGACTGGAATTTCCGTCGCGTAGGGCGGCAGCATGGCTTGGAGGT
GTCTAGCAATCGCCAGATGGACCTCGTTGAGTTTCCTCTCGAAAAGGCCC
GTCTCCAGATCACATTGCCGATGGTCTATATGTCCTGCATCTGCATCATT
GGCTACGGCTGGGTCATGAATTACCGGACTCATGTGGCTGGACCGCTTGT
TATGCTGTTTTTCACGGCGCATACCATCTCGGGAGCCACCAGCATCCTGG
TCACCCTGCTGATCGACTGCCACGTCAAGCGGGCAGCGACAGTCACAGCT
TCCAACACGATGTTCCGTTGCTTTCTGGGCGCGGGGGCGGTTGCAGCTGC
AGTGCCTATCATTGACGCAATCGGTATGGGCTGGATGGGGACCCTGATTG
CTGTCCTGTGGGCAGTTTCCAGCGTACTTCTCTGGGGTGTTCTAGTCTGG
GGCCACGACTACCGCAAGAAGCTGGCGGGGAGGATCTGAATGTCTCAAGA
AGTCAAGGACAAAGGTCCTCAGGAGGTTGTGCACACAATCGAGCTGGGCT
CCCTCGGGGGCAATTCCAGCAGTGCCAGCCTCCAGCCACTCTCTCAAACG
CCATCAGAGGCGCCGCCTCCGCCTCCGCCCCATACGGTGTTGACGGAAAA
GAAGAAGATCATGACCATTGCTATAGCGGCCATCGTGGGATTCTTAGCTC
CGGTGTCAGCAAACATCTACTATCCCGCCATCGACCAACTATCCGACGAT
TTGCATGTCTCCGTCAGCAAAATCAACTTGACCATCACCACGTACATGAT
CTTCCAAGGAGTTGCGCCGTTGGTGACGGGTAGTATTTCCGATGTGTATG
GCCGGCGACCCACGATGCTGGTCTGTCTGATCACGTACCTCGCCGTCAAT
ATCGGCCTGGCGCTGCAAGACAACTACATTGCGCTCATTGTCCTCAGAAC
CTTCCAAAGTTGCGGAAGCAGTGCCATTTCAGTCGTTGGCATGGCTGTCA
CGGCCGACGTGGTGACTAGAAGCGAGCGTGGCAAATACATGATCTACTCG
TCCCTGGGGATAACAATGGGACCTGCACTGGGACCTATTATTGGAGGTGT
CCTGGCCCAGTTTCTCGACTGGCGAAGTATCTTCTGGTTCCTGGCCATCT
TTGCCGCAGCGATGATAGTCCTGATCCTTGTCTGCTTCCCTGAAACCTGC
CGCATGGTGGTAGGAAATGGATCCATTCCCGCGCCGCGATGGAATAGGCC
ACTCATTCCGATCGTGGAGCCCTCAGCCTATGAGGGGGCTGAGGCGGCTA
AGAAAGAGCTGGAAGACGGGCCTAAGCCCCGTCGACCGACACCGATAGAC
AGCATCAAGATCGCCTTGGAAAAGGAAACTGGCGCCATCATCGCTTTCTG
CGCCATTCTCTACTGTGGGTACTTTGCTGTTCTCAGTAGTTTGTCTTCGG
AGTTGGGAGATAAGTACGGCTACAACTCGCTCCAGATTGGCCTGTGCTAT
ATCCCGTACGGCATCGGCAGTCTCACCTCACGGTGGACCGTTGGACGATT
TGTGGACTGGAATTTCCGTCGCGTAGGGCGGCAGCATGGCTTGGAGGTGT
CTAGCAATCGCCAGATGGACCTCGTTGAGTTTCCTCTCGAAAAGGCCCGT
CTCCAGATCACATTGCCGATGGTCTATATGTCCTGCATCTGCATCATTGG
CTACGGCTGGGTCATGAATTACCGGACTCATGTGGCTGGACCGCTTGTTA
TGCTGTTTTTCACGGCGCATACCATCTCGGGAGCCACCAGCATCCTGGTC
ACCCTGCTGATCGACTGCCACGTCAAGCGGGCAGCGACAGTCACAGCTTC
CAACACGATGTTCCGTTGCTTTCTGGGCGCGGGGGCGGTTGCAGCTGCAG
TGCCTATCATTGACGCAATCGGTATGGGCTGGATGGGGACCCTGATTGCT
GTCCTGTGGGCAGTTTCCAGCGTACTTCTCTGGGGTGTTCTAGTCTGGGG
CCACGACTACCGCAAGAAGCTGGCGGGGAGGATCTGAATGTCTCAAGAAG
TCAAGGACAAAGGTCCTCAGGAGGTTGTGCACACAATCGAGCTGGGCTCC
CTCGGGGGCAATTCCAGCAGTGCCAGCCTCCAGCCACTCTCTCAAACGCC
ATCAGAGGCGCCGCCTCCGCCTCCGCCCCATACGGTGTTGACGGAAAAGA
AGAAGATCATGACCATTGCTATAGCGGCCATCGTGGGATTCTTAGCTCCG
GTGTCAGCAAACATCTACTATCCCGCCATCGACCAACTATCCGACGATTT
GCATGTCTCCGTCAGCAAAATCAACTTGACCATCACCACGTACATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_008669KYF_008669Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_008669-T1KYF_008669-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008669-T1.cdsKYF_008669-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008669-T1.exon2KYF_008669-T1.exon2Aspergillus niger KYF3exon
KYF_008669-T1.exon1KYF_008669-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4548311..4549918 -
Powered by Drupal