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KYF_009013-T1, KYF_009013-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_009013-T1
Unique NameKYF_009013-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:859487..860513-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_009013-T1 ID=KYF_009013-T1|Name=KYF_009013-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1027bp|location=Sequence derived from alignment at ch7:859487..860513- (Aspergillus niger KYF3)
ATGGCTGACGCTCCCCGTGGACGTGGAGGATTCGGCTCTCGCGGTGACCG
TGGTGGTGACCGTGGCCGTGGCCGTGGTCGCCGTGGTCGTCGCGGTGGTG
CCAAGGAGCAGGAGAAGGAATGGCAGCCCGTCACCAAGCTCGGCCGTCTC
GTCAAGGCTGGCAAGATCACCAGCATGGAGCAGATCTACCTGCACTCCCT
GCCCGTGAAGGAGTACCAGATTGTGGACTTCTTCCTCCCCAAGCTGAAGG
ATGAGGTCATGAAGGTACGAACCGATCGCCCGATTACCGAATTGTCGACA
AGGAAGATCTACGATTGTGCGCGGGAAATAGGATTGAATGCGCGGGTGGA
ATTGATACGTGGATCGGAATTGCAGACATGATGGGATCAAAAAGGATATA
TCGAAAAAAAAAAATGGGAGGTGCTGACGGCTGGAAAATTTAGATCAAAC
CCGTCCAGAAGCAGACCCGTGCCGGTCAGCGTACCCGCTTCAAGGCCGTC
GTCGTCATCGGTGACTCCGAGGGTCACATCGGTCTCGGTATCAAGACCTC
CAAGGAAGTCGCTACCGCTATCCGTGCTGCCATCACCATCGCCAAGCTCA
GCGTTCTCCCCGTCCGTAGAGGTTACTGGGGTACCAACCTTGGTGAGCCT
CACTCTCTGCCCGTTAAGCAGAGCGCCAAGTGTGGTTCCGTCTCCGTCAG
AGTATGTCGCGACTCTTTCGATCCTCGATTTCGCTTTTCCGTCCGGCCAA
TATGCTAACCCGGTTATAGCTTATCCCCGCTCCCCGTGGTACCGGTCTCG
TTGCCTCCCCCGCTGTCAAGCGTCTGCTCCAGCTTGCCGGTGTCCAGGAC
GCCTACACCTGCTCTTCCGGTTCCACCAAGACCCTCGAGAACACTCTCAA
GGCTACTTTCCTTGCCGTCGTCAACACCTACGGCTTCCTCACCCCCAACC
TCTGGAAGGAGACTAAGCTCATCCGCAGCCCTCTGGAGGAGTTCGGTGAT
GTCCTGCGTCAGGGCAAGAAGTACTAG
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Coding sequence (CDS) from alignment at ch7:859487..860513-

>KYF_009013-T1 ID=KYF_009013-T1|Name=KYF_009013-T1|organism=Aspergillus niger KYF3|type=CDS|length=2340bp|location=Sequence derived from alignment at ch7:859487..860513- (Aspergillus niger KYF3)
CTTATCCCCGCTCCCCGTGGTACCGGTCTCGTTGCCTCCCCCGCTGTCAA
GCGTCTGCTCCAGCTTGCCGGTGTCCAGGACGCCTACACCTGCTCTTCCG
GTTCCACCAAGACCCTCGAGAACACTCTCAAGGCTACTTTCCTTGCCGTC
GTCAACACCTACGGCTTCCTCACCCCCAACCTCTGGAAGGAGACTAAGCT
CATCCGCAGCCCTCTGGAGGAGTTCGGTGATGTCCTGCGTCAGGGCAAGA
AGTACTAGATCAAACCCGTCCAGAAGCAGACCCGTGCCGGTCAGCGTACC
CGCTTCAAGGCCGTCGTCGTCATCGGTGACTCCGAGGGTCACATCGGTCT
CGGTATCAAGACCTCCAAGGAAGTCGCTACCGCTATCCGTGCTGCCATCA
CCATCGCCAAGCTCAGCGTTCTCCCCGTCCGTAGAGGTTACTGGGGTACC
AACCTTGGTGAGCCTCACTCTCTGCCCGTTAAGCAGAGCGCCAAGTGTGG
TTCCGTCTCCGTCAGAATGGCTGACGCTCCCCGTGGACGTGGAGGATTCG
GCTCTCGCGGTGACCGTGGTGGTGACCGTGGCCGTGGCCGTGGTCGCCGT
GGTCGTCGCGGTGGTGCCAAGGAGCAGGAGAAGGAATGGCAGCCCGTCAC
CAAGCTCGGCCGTCTCGTCAAGGCTGGCAAGATCACCAGCATGGAGCAGA
TCTACCTGCACTCCCTGCCCGTGAAGGAGTACCAGATTGTGGACTTCTTC
CTCCCCAAGCTGAAGGATGAGGTCATGAAGCTTATCCCCGCTCCCCGTGG
TACCGGTCTCGTTGCCTCCCCCGCTGTCAAGCGTCTGCTCCAGCTTGCCG
GTGTCCAGGACGCCTACACCTGCTCTTCCGGTTCCACCAAGACCCTCGAG
AACACTCTCAAGGCTACTTTCCTTGCCGTCGTCAACACCTACGGCTTCCT
CACCCCCAACCTCTGGAAGGAGACTAAGCTCATCCGCAGCCCTCTGGAGG
AGTTCGGTGATGTCCTGCGTCAGGGCAAGAAGTACTAGATCAAACCCGTC
CAGAAGCAGACCCGTGCCGGTCAGCGTACCCGCTTCAAGGCCGTCGTCGT
CATCGGTGACTCCGAGGGTCACATCGGTCTCGGTATCAAGACCTCCAAGG
AAGTCGCTACCGCTATCCGTGCTGCCATCACCATCGCCAAGCTCAGCGTT
CTCCCCGTCCGTAGAGGTTACTGGGGTACCAACCTTGGTGAGCCTCACTC
TCTGCCCGTTAAGCAGAGCGCCAAGTGTGGTTCCGTCTCCGTCAGAATGG
CTGACGCTCCCCGTGGACGTGGAGGATTCGGCTCTCGCGGTGACCGTGGT
GGTGACCGTGGCCGTGGCCGTGGTCGCCGTGGTCGTCGCGGTGGTGCCAA
GGAGCAGGAGAAGGAATGGCAGCCCGTCACCAAGCTCGGCCGTCTCGTCA
AGGCTGGCAAGATCACCAGCATGGAGCAGATCTACCTGCACTCCCTGCCC
GTGAAGGAGTACCAGATTGTGGACTTCTTCCTCCCCAAGCTGAAGGATGA
GGTCATGAAGCTTATCCCCGCTCCCCGTGGTACCGGTCTCGTTGCCTCCC
CCGCTGTCAAGCGTCTGCTCCAGCTTGCCGGTGTCCAGGACGCCTACACC
TGCTCTTCCGGTTCCACCAAGACCCTCGAGAACACTCTCAAGGCTACTTT
CCTTGCCGTCGTCAACACCTACGGCTTCCTCACCCCCAACCTCTGGAAGG
AGACTAAGCTCATCCGCAGCCCTCTGGAGGAGTTCGGTGATGTCCTGCGT
CAGGGCAAGAAGTACTAGATCAAACCCGTCCAGAAGCAGACCCGTGCCGG
TCAGCGTACCCGCTTCAAGGCCGTCGTCGTCATCGGTGACTCCGAGGGTC
ACATCGGTCTCGGTATCAAGACCTCCAAGGAAGTCGCTACCGCTATCCGT
GCTGCCATCACCATCGCCAAGCTCAGCGTTCTCCCCGTCCGTAGAGGTTA
CTGGGGTACCAACCTTGGTGAGCCTCACTCTCTGCCCGTTAAGCAGAGCG
CCAAGTGTGGTTCCGTCTCCGTCAGAATGGCTGACGCTCCCCGTGGACGT
GGAGGATTCGGCTCTCGCGGTGACCGTGGTGGTGACCGTGGCCGTGGCCG
TGGTCGCCGTGGTCGTCGCGGTGGTGCCAAGGAGCAGGAGAAGGAATGGC
AGCCCGTCACCAAGCTCGGCCGTCTCGTCAAGGCTGGCAAGATCACCAGC
ATGGAGCAGATCTACCTGCACTCCCTGCCCGTGAAGGAGTACCAGATTGT
GGACTTCTTCCTCCCCAAGCTGAAGGATGAGGTCATGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS2KYF_009013Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_009013-T1KYF_009013-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009013-T1.cdsKYF_009013-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009013-T1.exon3KYF_009013-T1.exon3Aspergillus niger KYF3exon
KYF_009013-T1.exon2KYF_009013-T1.exon2Aspergillus niger KYF3exon
KYF_009013-T1.exon1KYF_009013-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09264903
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR018192
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR013810
DBxrefInterPro:IPR005324
DBxrefInterPro:IPR005711
DBxrefPFAM:PF03719
DBxrefPFAM:PF00333
Product40S ribosomal protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:859487..860513 -
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