You are here

Home

KYF_009258-T1, KYF_009258-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_009258-T1
Unique NameKYF_009258-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1729718..1730968-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_009258-T1 ID=KYF_009258-T1|Name=KYF_009258-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1251bp|location=Sequence derived from alignment at ch7:1729718..1730968- (Aspergillus niger KYF3)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCTACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACTGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGCAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
back to top

Coding sequence (CDS) from alignment at ch7:1729718..1730968-

>KYF_009258-T1 ID=KYF_009258-T1|Name=KYF_009258-T1|organism=Aspergillus niger KYF3|type=CDS|length=1251bp|location=Sequence derived from alignment at ch7:1729718..1730968- (Aspergillus niger KYF3)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCTACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACTGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGCAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016992lipoate synthase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_009258KYF_009258Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009258-T1.cdsKYF_009258-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009258-T1.exon1KYF_009258-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_009258-T1KYF_009258-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_7.7
NoteBUSCO:EOG0926131E
DBxrefInterPro:IPR031691
DBxrefInterPro:IPR003698
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR006638
DBxrefPFAM:PF04055
DBxrefPFAM:PF16881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1729718..1730968 -
Powered by Drupal