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KYF_009330-T1, KYF_009330-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_009330-T1
Unique NameKYF_009330-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1951792..1952572+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_009330-T1 ID=KYF_009330-T1|Name=KYF_009330-T1|organism=Aspergillus niger KYF3|type=mRNA|length=781bp|location=Sequence derived from alignment at ch7:1951792..1952572+ (Aspergillus niger KYF3)
ATGGCTGTCAGGAACTCCAGTGCGTCGTCCTGTTCTGTCGATTTTTCTCG
AAGTCGCCAATCCAATCCATACTAATTTGACTTCGTGATGATTTCAGGTC
TCGCCTCTTCTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCC
AGCGAGCGCCGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGC
CAAGTACAATGTACGTTCGATCAGACCGATGTGATTCTTGTTTTTGCAGC
CCCTGGGATGTGTGTGTTTTTGGAGATGGATTTGGCATGGTTTCTTTCTT
TCCGGTCGGGGACAGGCTGGATCAGGCCAGCGAGATTGGGATTTGGGAGG
AAGATGCAAGAACCAGATCCAATCGACAAACATCCAATCCGAGATATCAG
GCACAACGAAACAATACTGGGAGAAATGGTTCTAACGCAGTCGTTTGATA
GGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTGAGCCAAGGCTGAT
TCTAACCCGACATCTAACCCACTCGCTAAACTGAGAACAAGGTCATGGTC
GTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCG
CCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACG
GCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAACGTCGTCATCAAGAAG
CTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGG
TCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA
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Coding sequence (CDS) from alignment at ch7:1951792..1952572+

>KYF_009330-T1 ID=KYF_009330-T1|Name=KYF_009330-T1|organism=Aspergillus niger KYF3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch7:1951792..1952572+ (Aspergillus niger KYF3)
ATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCGCGCGC
CGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTCTGCTC
CTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGCCCATC
CGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGA
GGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGC
GCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCAC
CCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGC
CATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCG
CTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCG
CGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTC
TGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGC
CCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGC
CGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGT
CGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCC
TCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGT
GAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAA
GTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCA
AGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATC
CTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTC
CATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACA
AGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATC
CACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCAT
CCCCCTCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGG
ACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAG
GCCAAGTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCG
CCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCG
TTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTC
CGCTCCATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAG
CAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGG
CCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTC
CCCATCCCCCTCCACCCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGA
CAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCG
TCAAGGCCAAGTCCGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL26AKYF_009330Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009330-T1.exon1KYF_009330-T1.exon1Aspergillus niger KYF3exon
KYF_009330-T1.exon2KYF_009330-T1.exon2Aspergillus niger KYF3exon
KYF_009330-T1.exon3KYF_009330-T1.exon3Aspergillus niger KYF3exon
KYF_009330-T1.exon4KYF_009330-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009330-T1.cdsKYF_009330-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_009330-T1KYF_009330-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265DAV
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041988
DBxrefInterPro:IPR005825
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR005756
DBxrefInterPro:IPR005824
DBxrefPFAM:PF16906
DBxrefPFAM:PF00467
Product60S ribosomal protein L26A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1951792..1952572 +
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