You are here

Home

KYF_009381-T1, KYF_009381-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_009381-T1
Unique NameKYF_009381-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2122147..2123201+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_009381-T1 ID=KYF_009381-T1|Name=KYF_009381-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1055bp|location=Sequence derived from alignment at ch7:2122147..2123201+ (Aspergillus niger KYF3)
ATGTCTGGTGAGTAAATGTGACTGCTATGTGTTTGTTGGCAATAATAACG
AAAACCATTGTCCATAGGTGTACAGGAACCTACTGGTGCGGTAGGGACAG
ACAAGGACAGAGGGGAGAGTGAATTCGTAGACAATCATCGGGTCAAGAAA
GAACAAAGTCCTAGCCAGAGAAATACCTTCGACAGAGAACGCAACTCCGC
GCAGTGAGATCTCGATTTCGTTTATCGATACTCTCGAAGGTATATGCGAG
GTTATCGAAGCATTGATGAACTCTCCAGTCACTCCCCCCACTATATACAT
CGATCTTGAAGGTATAAACCTCGGTCGAGAGGGCCCGACCTCTATTGCCC
AAATATTTTTATACTCACAACATCATGTCTACTTAGTAGATGTTCATACT
CTCGGGGCCACAGCATTTGGTCACGCAACAACTACGGGCAAGACTCTTCG
GTCGATCTTGAGTCAGATGGGATTCCGAAAGTCTTCTTTGATGTCCGCAA
TGACTCCGCTGCCATGTTCCATCAGTATCAGGTGGAACTGGCAGGCATTT
ATGACCTGGAAGTCATGGAGGTGGGCACCAGGGCGCGTCCCGGAAAATAC
TTGGCCGGGCTGGCCAAGTGTATTTCGCGGGACGTGCCTATGACTCCCTT
TGAGAAGGCCAGTTGGAGAGCTACGAAAGAGCGAGGAAAGACCCTCTTCT
CACTGCAGCATGGAGGTTCGTATGAAGTCATCAATGCTCGGCCCCTTTCG
AAAGAGGTAGTGGAATATTGCGTACAAGACGTTCAATTCTTGCCTCGACT
GTGGCAGACCTATAGTCGGGCTCTTACTCCGACCTTAAGACAGAAGGCCC
AGGCTGAGGTGAGAGATCGGATCATTCTCAGCCAGTCTCCGCAGTTTAAC
GGCAAAGGAATCAATGTGGTCTTAGCTCCACAGATCTCAGAGACAGAGAC
AGAGTGTCCAAGTTCATGGCTGTTATTGTTTGTTCCAGCACATATAACTG
CGAGGACTGAACCTGATCATACATATAGTCACAAACGACAAAGGCCATGA
TGTGA
back to top

Coding sequence (CDS) from alignment at ch7:2122147..2123201+

>KYF_009381-T1 ID=KYF_009381-T1|Name=KYF_009381-T1|organism=Aspergillus niger KYF3|type=CDS|length=2460bp|location=Sequence derived from alignment at ch7:2122147..2123201+ (Aspergillus niger KYF3)
ATGTCTGGTGTACAGGAACCTACTGGTGCGGTAGGGACAGACAAGGACAG
AGGGGAGAGTGAATTCGTAGACAATCATCGGGTCAAGAAAGAACAAAGTC
CTAGCCAGAGAAATACCTTCGACAGAGAACGCAACTCCGCGCACATTTGG
TCACGCAACAACTACGGGCAAGACTCTTCGGTCGATCTTGAGTCAGATGG
GATTCCGAAAGTCTTCTTTGATGTCCGCAATGACTCCGCTGCCATGTTCC
ATCAGTATCAGGTGGAACTGGCAGGCATTTATGACCTGGAAGTCATGGAG
GTGGGCACCAGGGCGCGTCCCGGAAAATACTTGGCCGGGCTGGCCAAGTG
TATTTCGCGGGACGTGCCTATGACTCCCTTTGAGAAGGCCAGTTGGAGAG
CTACGAAAGAGCGAGGAAAGACCCTCTTCTCACTGCAGCATGGAGGTTCG
TATGAAGTCATCAATGCTCGGCCCCTTTCGAAAGAGGTAGTGGAATATTG
CGTACAAGACGTTCAATTCTTGCCTCGACTGTGGCAGACCTATAGTCGGG
CTCTTACTCCGACCTTAAGACAGAAGGCCCAGGCTGAGTCACAAACGACA
AAGGCCATGATGTGAATGTCTGGTGTACAGGAACCTACTGGTGCGGTAGG
GACAGACAAGGACAGAGGGGAGAGTGAATTCGTAGACAATCATCGGGTCA
AGAAAGAACAAAGTCCTAGCCAGAGAAATACCTTCGACAGAGAACGCAAC
TCCGCGCACATTTGGTCACGCAACAACTACGGGCAAGACTCTTCGGTCGA
TCTTGAGTCAGATGGGATTCCGAAAGTCTTCTTTGATGTCCGCAATGACT
CCGCTGCCATGTTCCATCAGTATCAGGTGGAACTGGCAGGCATTTATGAC
CTGGAAGTCATGGAGGTGGGCACCAGGGCGCGTCCCGGAAAATACTTGGC
CGGGCTGGCCAAGTGTATTTCGCGGGACGTGCCTATGACTCCCTTTGAGA
AGGCCAGTTGGAGAGCTACGAAAGAGCGAGGAAAGACCCTCTTCTCACTG
CAGCATGGAGGTTCGTATGAAGTCATCAATGCTCGGCCCCTTTCGAAAGA
GGTAGTGGAATATTGCGTACAAGACGTTCAATTCTTGCCTCGACTGTGGC
AGACCTATAGTCGGGCTCTTACTCCGACCTTAAGACAGAAGGCCCAGGCT
GAGTCACAAACGACAAAGGCCATGATGTGAATGTCTGGTGTACAGGAACC
TACTGGTGCGGTAGGGACAGACAAGGACAGAGGGGAGAGTGAATTCGTAG
ACAATCATCGGGTCAAGAAAGAACAAAGTCCTAGCCAGAGAAATACCTTC
GACAGAGAACGCAACTCCGCGCACATTTGGTCACGCAACAACTACGGGCA
AGACTCTTCGGTCGATCTTGAGTCAGATGGGATTCCGAAAGTCTTCTTTG
ATGTCCGCAATGACTCCGCTGCCATGTTCCATCAGTATCAGGTGGAACTG
GCAGGCATTTATGACCTGGAAGTCATGGAGGTGGGCACCAGGGCGCGTCC
CGGAAAATACTTGGCCGGGCTGGCCAAGTGTATTTCGCGGGACGTGCCTA
TGACTCCCTTTGAGAAGGCCAGTTGGAGAGCTACGAAAGAGCGAGGAAAG
ACCCTCTTCTCACTGCAGCATGGAGGTTCGTATGAAGTCATCAATGCTCG
GCCCCTTTCGAAAGAGGTAGTGGAATATTGCGTACAAGACGTTCAATTCT
TGCCTCGACTGTGGCAGACCTATAGTCGGGCTCTTACTCCGACCTTAAGA
CAGAAGGCCCAGGCTGAGTCACAAACGACAAAGGCCATGATGTGAATGTC
TGGTGTACAGGAACCTACTGGTGCGGTAGGGACAGACAAGGACAGAGGGG
AGAGTGAATTCGTAGACAATCATCGGGTCAAGAAAGAACAAAGTCCTAGC
CAGAGAAATACCTTCGACAGAGAACGCAACTCCGCGCACATTTGGTCACG
CAACAACTACGGGCAAGACTCTTCGGTCGATCTTGAGTCAGATGGGATTC
CGAAAGTCTTCTTTGATGTCCGCAATGACTCCGCTGCCATGTTCCATCAG
TATCAGGTGGAACTGGCAGGCATTTATGACCTGGAAGTCATGGAGGTGGG
CACCAGGGCGCGTCCCGGAAAATACTTGGCCGGGCTGGCCAAGTGTATTT
CGCGGGACGTGCCTATGACTCCCTTTGAGAAGGCCAGTTGGAGAGCTACG
AAAGAGCGAGGAAAGACCCTCTTCTCACTGCAGCATGGAGGTTCGTATGA
AGTCATCAATGCTCGGCCCCTTTCGAAAGAGGTAGTGGAATATTGCGTAC
AAGACGTTCAATTCTTGCCTCGACTGTGGCAGACCTATAGTCGGGCTCTT
ACTCCGACCTTAAGACAGAAGGCCCAGGCTGAGTCACAAACGACAAAGGC
CATGATGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_009381KYF_009381Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009381-T1.exon1KYF_009381-T1.exon1Aspergillus niger KYF3exon
KYF_009381-T1.exon2KYF_009381-T1.exon2Aspergillus niger KYF3exon
KYF_009381-T1.exon3KYF_009381-T1.exon3Aspergillus niger KYF3exon
KYF_009381-T1.exon4KYF_009381-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009381-T1.cdsKYF_009381-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_009381-T1KYF_009381-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR002562
DBxrefPFAM:PF01612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2122147..2123201 +
Powered by Drupal