You are here

Home

KYF_009558-T1, KYF_009558-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_009558-T1
Unique NameKYF_009558-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2616663..2617490+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_009558-T1 ID=KYF_009558-T1|Name=KYF_009558-T1|organism=Aspergillus niger KYF3|type=mRNA|length=828bp|location=Sequence derived from alignment at ch7:2616663..2617490+ (Aspergillus niger KYF3)
ATGTCCTTGACGCTGGAAAGCCAGATCCAGCAGAGTCTCGAGGCCGACAT
CGCCAATGGCAAACTCTCGGCCGTCAGGGAACTTTACCAGTTAACAGACC
CAGATGGACAGCCCAGTCTACTAGAACAGATCGCTGCACTCGCTGCAAAG
CACATTCAGCTTGACATTATAGACTGGGTATTCACTGAAGGTTTCCAGGT
ACCTCTTGAAACACTAAATGACGAGTTCTACTTCCAAGTATGCGCCGCTG
GATCACTTGGGTTGTGGAAAAGAGTTGTCAAGAATGGCTTCAACCTAAAT
GGCCATCGCAGTGAGTACATAGGTGATGCTCTGAGCCTGGCAGCATACGA
GGGTAATATTGACATTGTACGCTTCCTTTTGGAGAATGGACAGGATCCAA
ATGATTCCTGGGCAGGGTATGATGATATGGAACCGAGCGTGGCTGCGTTA
GCGGGTGAGAGGCCATCTCTGATGATTCTCCATCTTGTACTACAACATGG
ATGGAACAAGAAGGGTAGTGTCGCGCATATTGCGGCAGCTGAAATGGGCA
ATATGGAAGCACTGAAGTTACTGGTAGAGCATGGCGCAGATTTGGAGGAG
GCCCGCGGGTGGTGGTTCAATTGTGGTGTGGAAGGGGATGTATGGGGGAC
TGCACTGTATCGAGCAGCCTTTAAGGGCCAGAGAGATTCTGTGGCGTATC
TGCTAGACAAGGGAGCCAGCACCAGGTTCAAGGATGAAAAGGGGCGGTCT
ATCATGTGGGCGGCGAGACAAGGGGATAATAAAGAGGTGATCAGCCTGCT
GCTGGATGTTGGGCTGGAGGGAGAATGA
back to top

Coding sequence (CDS) from alignment at ch7:2616663..2617490+

>KYF_009558-T1 ID=KYF_009558-T1|Name=KYF_009558-T1|organism=Aspergillus niger KYF3|type=CDS|length=828bp|location=Sequence derived from alignment at ch7:2616663..2617490+ (Aspergillus niger KYF3)
ATGTCCTTGACGCTGGAAAGCCAGATCCAGCAGAGTCTCGAGGCCGACAT
CGCCAATGGCAAACTCTCGGCCGTCAGGGAACTTTACCAGTTAACAGACC
CAGATGGACAGCCCAGTCTACTAGAACAGATCGCTGCACTCGCTGCAAAG
CACATTCAGCTTGACATTATAGACTGGGTATTCACTGAAGGTTTCCAGGT
ACCTCTTGAAACACTAAATGACGAGTTCTACTTCCAAGTATGCGCCGCTG
GATCACTTGGGTTGTGGAAAAGAGTTGTCAAGAATGGCTTCAACCTAAAT
GGCCATCGCAGTGAGTACATAGGTGATGCTCTGAGCCTGGCAGCATACGA
GGGTAATATTGACATTGTACGCTTCCTTTTGGAGAATGGACAGGATCCAA
ATGATTCCTGGGCAGGGTATGATGATATGGAACCGAGCGTGGCTGCGTTA
GCGGGTGAGAGGCCATCTCTGATGATTCTCCATCTTGTACTACAACATGG
ATGGAACAAGAAGGGTAGTGTCGCGCATATTGCGGCAGCTGAAATGGGCA
ATATGGAAGCACTGAAGTTACTGGTAGAGCATGGCGCAGATTTGGAGGAG
GCCCGCGGGTGGTGGTTCAATTGTGGTGTGGAAGGGGATGTATGGGGGAC
TGCACTGTATCGAGCAGCCTTTAAGGGCCAGAGAGATTCTGTGGCGTATC
TGCTAGACAAGGGAGCCAGCACCAGGTTCAAGGATGAAAAGGGGCGGTCT
ATCATGTGGGCGGCGAGACAAGGGGATAATAAAGAGGTGATCAGCCTGCT
GCTGGATGTTGGGCTGGAGGGAGAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_009558KYF_009558Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009558-T1.exon1KYF_009558-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009558-T1.cdsKYF_009558-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_009558-T1KYF_009558-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_7.12
NoteEggNog:ENOG41
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2616663..2617490 +
Powered by Drupal