You are here

Home

KYF_009989-T1, KYF_009989-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_009989-T1
Unique NameKYF_009989-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3888883..3889267+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_009989-T1 ID=KYF_009989-T1|Name=KYF_009989-T1|organism=Aspergillus niger KYF3|type=mRNA|length=385bp|location=Sequence derived from alignment at ch7:3888883..3889267+ (Aspergillus niger KYF3)
ATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACTCTAGTATC
CGGCGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGG
GGACAATACGTCGCATGTTAGAGCCGTCTAGTGAGTCTTGTCTCCTCACA
TGTGTGTTTCAGTGGTGGCACTTGCTAACAACTCCATTACTATATAGGTC
GCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGCGGT
ATAGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAATAA
GAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTTTGG
AATTGTTGATGGCGGCGGATTATTTGGATGCGTGA
back to top

Coding sequence (CDS) from alignment at ch7:3888883..3889267+

>KYF_009989-T1 ID=KYF_009989-T1|Name=KYF_009989-T1|organism=Aspergillus niger KYF3|type=CDS|length=636bp|location=Sequence derived from alignment at ch7:3888883..3889267+ (Aspergillus niger KYF3)
ATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACTCTAGTATC
CGGCGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGG
GGACAATACGTCGCATGTTAGAGCCGTCTAGTCGCTTCTCGGAATCCGTT
ACCGGTCGATGCGTCCTCGAGAATATTAGCGGTATAGTGCTTGAAAAAGT
ATGCGAGTATTTCTGCTACAATGAGAAGAATAAGAACCAGACATATGTTC
CGGATATGGATATCCCGCCGGAGTTGTGTTTGGAATTGTTGATGGCGGCG
GATTATTTGGATGCGTGAATGTCCGCTTCAAATCCCCCCTCACAGTCCGA
ATACGTGACTCTAGTATCCGGCGATGGATTCGAATTCGTCATCCCGCGCA
GCACAGCCTGCGTGTCGGGGACAATACGTCGCATGTTAGAGCCGTCTAGT
CGCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGCGG
TATAGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAATA
AGAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTTTG
GAATTGTTGATGGCGGCGGATTATTTGGATGCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_009989KYF_009989Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009989-T1.exon1KYF_009989-T1.exon1Aspergillus niger KYF3exon
KYF_009989-T1.exon2KYF_009989-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_009989-T1.cdsKYF_009989-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_009989-T1KYF_009989-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265QTV
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR016073
DBxrefInterPro:IPR001232
DBxrefPFAM:PF03931
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3888883..3889267 +
Powered by Drupal