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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:752793..753669- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_010325-T1 ID=KYF_010325-T1|Name=KYF_010325-T1|organism=Aspergillus niger KYF3|type=mRNA|length=877bp|location=Sequence derived from alignment at ch8:752793..753669- (Aspergillus niger KYF3)
ATGGACCCCTATTTGGACTTCTGGAATCTCATGGCTTACGATTACGCAGG
AGATACAATTTCGGGGTACACTGGACATCAGGCAAACCTATTCAAGAGCA
GCTCTAACCAGCAGTCCACGCCATTCAATACCGAAGAGGCTGTCGAGAAT
TATCTTAACCGCGGAGTTATAGCAAGAAAAATTGTTCTGGGTATGCCTCT
TTATGGTCGGGCATTCACAAATACAATGGGCCCTGGTAAACCCTATTCCG
GCATAGGCGAAGGCAGCTGGGAAGACGGCGTCTGGGACTACAAGGCTCTG
CCGCGGCCAGGAGCCGAAGAACACACAGACGACAGCATAATTGCAAGCTA
CAGTTACGACTCAGAGCGGACCTTTATCAGCTACGATAGCCCTCTGGTTG
CAGAGCGTAAAGCGGAATACATTAGGCTGAAAGGGCTAGGAGGTGGCATG
TGGTGGGAGAGTAGTGCGGATAAGCCAGGAAATGATAGTCTGATAACGAC
GGTATGCTCCATTCTGTCTACTGTACGTGGCTAACAGATACCCAAGGTCG
TTGAAGCACTCGGGGGCGTTGGCGCGTTGGAGCAAAGACAGAATCAGCTG
GACTACCCTCTTTCCAAGTACGATAATATACGGGGTAGAATGCATGAATA
GCGACGATTAGAAGTACGAGAGAAAAGGAAACAAGCAAGACAAGCGACTT
TCATGACAGACACAGCTTCACTTAGATCTGTATATTAGAGGGTCGTATTA
GACAGTGATCAGAAGTGAGCAAAGGTTAAGACATATTGAATGACTGGCGC
ACACTCTGACTAAAGGACGACTAAGAACGACTAGCTTCTAGCCTCGTGAG
CTTGACGGTAGCATTACCGTGGCTTAG back to topCoding sequence (CDS) from alignment at ch8:752793..753669- >KYF_010325-T1 ID=KYF_010325-T1|Name=KYF_010325-T1|organism=Aspergillus niger KYF3|type=CDS|length=1074bp|location=Sequence derived from alignment at ch8:752793..753669- (Aspergillus niger KYF3)
CCTCGTGAGCTTGACGGTAGCATTACCGTGGCTTAGATGGACCCCTATTT
GGACTTCTGGAATCTCATGGCTTACGATTACGCAGGAGATACAATTTCGG
GGTACACTGGACATCAGGCAAACCTATTCAAGAGCAGCTCTAACCAGCAG
TCCACGCCATTCAATACCGAAGAGGCTGTCGAGAATTATCTTAACCGCGG
AGTTATAGCAAGAAAAATTGTTCTGGGTATGCCTCTTTATGGTCGGGCAT
TCACAAATACAATGGGCCCTGGTAAACCCTATTCCGGCATAGGCGAAGGC
AGCTGGGAAGACGGCGTCTGGGACTACAAGGCTCTGCCGCGGCCAGGAGC
CGAAGAACACACAGACGACAGCATAATTGCAAGCTACAGTTACGACTCAG
AGCGGACCTTTATCAGCTACGATAGCCCTCTGGTTGCAGAGCGTAAAGCG
GAATACATTAGGCTGAAAGGGCTAGGAGGTGGCATGTGGTGGGAGAGTAG
TGCGGATAAGCCAGGAAATGATAGTCTGATAACGACGCCTCGTGAGCTTG
ACGGTAGCATTACCGTGGCTTAGATGGACCCCTATTTGGACTTCTGGAAT
CTCATGGCTTACGATTACGCAGGAGATACAATTTCGGGGTACACTGGACA
TCAGGCAAACCTATTCAAGAGCAGCTCTAACCAGCAGTCCACGCCATTCA
ATACCGAAGAGGCTGTCGAGAATTATCTTAACCGCGGAGTTATAGCAAGA
AAAATTGTTCTGGGTATGCCTCTTTATGGTCGGGCATTCACAAATACAAT
GGGCCCTGGTAAACCCTATTCCGGCATAGGCGAAGGCAGCTGGGAAGACG
GCGTCTGGGACTACAAGGCTCTGCCGCGGCCAGGAGCCGAAGAACACACA
GACGACAGCATAATTGCAAGCTACAGTTACGACTCAGAGCGGACCTTTAT
CAGCTACGATAGCCCTCTGGTTGCAGAGCGTAAAGCGGAATACATTAGGC
TGAAAGGGCTAGGAGGTGGCATGTGGTGGGAGAGTAGTGCGGATAAGCCA
GGAAATGATAGTCTGATAACGACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH18 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR029070 |
| DBxref | InterPro:IPR001223 |
| DBxref | InterPro:IPR011583 |
| Product | Endochitinase B1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:752793..753669 - |
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