You are here

Home

KYF_010581-T1, KYF_010581-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_010581-T1
Unique NameKYF_010581-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1660583..1661439-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_010581-T1 ID=KYF_010581-T1|Name=KYF_010581-T1|organism=Aspergillus niger KYF3|type=mRNA|length=857bp|location=Sequence derived from alignment at ch8:1660583..1661439- (Aspergillus niger KYF3)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGGTAGGTGACAGCAGAAAAACAGCAA
CTAGGCAACAACAAATGATGTCTAACGGGTTATTGATCTGTATAGCGGCT
AAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGAC
GACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGG
CGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCG
ATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAAT
GTATGTTGTTTCGTTACGGTATCATTTGAGTGATGGGAACACGGCAACTG
ACTATGGTCTAGGGATACACTTCGCGAACAGCACCAACTCAGCACCGAAA
TCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCC
GATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCG
GATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTAC
CTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTAT
GAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAA
back to top

Coding sequence (CDS) from alignment at ch8:1660583..1661439-

>KYF_010581-T1 ID=KYF_010581-T1|Name=KYF_010581-T1|organism=Aspergillus niger KYF3|type=CDS|length=2676bp|location=Sequence derived from alignment at ch8:1660583..1661439- (Aspergillus niger KYF3)
TCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAG
AAGCTACGTGCGGAAATGGCCATGGGATAAGGATACACTTCGCGAACAGC
ACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTC
GACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCA
GGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAG
ACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAACGGCTAAGAAC
GCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGC
GCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATA
TCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCG
AAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATATGTGG
TCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAA
TGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGA
AGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAAC
GTAACGTCAAACAAGGCCGTCAAATCCAAACCTCAGACCGAAGAGGAAGA
CGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAG
GATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCAT
TACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGG
AACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACA
GGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAA
TGGAGAAACGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGA
ACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTAC
TCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGC
GGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGATACGG
TGGATCAGACAATATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGC
GGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGAT
ATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGA
TGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGTCAAATCCAAAC
CTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCG
GAAATGGCCATGGGATAAGGATACACTTCGCGAACAGCACCAACTCAGCA
CCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGAC
GAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGA
CGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACC
GTTTACCTCCTGCGGCAAATGGAGAAACGGCTAAGAACGCCCTTCGACGG
AAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCA
GCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGA
CTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGC
TCCATGACGCTTGATACGGTGGATCAGACAATATGTGGTCTTGGTTCGGC
GGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCAT
GCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGA
ATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACGTCAAAC
AAGGCCGTCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGA
ACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAGGATACACTTCGC
GAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAA
TCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCT
TGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCG
GTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAACGGC
TAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGA
CGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCG
GCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGC
GATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAA
TATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGC
CCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAG
CGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCG
GAAGAACGTAACGTCAAACAAGGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7KYF_010581Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_010581-T1KYF_010581-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010581-T1.cdsKYF_010581-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010581-T1.exon4KYF_010581-T1.exon4Aspergillus niger KYF3exon
KYF_010581-T1.exon3KYF_010581-T1.exon3Aspergillus niger KYF3exon
KYF_010581-T1.exon2KYF_010581-T1.exon2Aspergillus niger KYF3exon
KYF_010581-T1.exon1KYF_010581-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09264W71
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1660583..1661439 -
Powered by Drupal