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KYF_010781-T1, KYF_010781-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_010781-T1
Unique NameKYF_010781-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2294175..2294991+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_010781-T1 ID=KYF_010781-T1|Name=KYF_010781-T1|organism=Aspergillus niger KYF3|type=mRNA|length=817bp|location=Sequence derived from alignment at ch8:2294175..2294991+ (Aspergillus niger KYF3)
ATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCCCGACAG
AGCCCCCGTACGCATCCCCTCATCCCTTATCGCATCCTCGCAGGTTGACC
TGTCTGCTGACTTGTACTCGCTAGGACCTCCCAGCCAAGGTGCGCACTAT
TGCTCCATCCCTCTTGATCCTCCTCTCTGTCTTTCAATCCCCCGTTCTCG
ATTGACCCGCGCACAGTTCCGGAAACTCCTGACGCCAGGCAAGATCGGCC
AGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCACTTTCGAATTCCTC
CGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGCGACTTCGATGTCGA
TTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCACGGGAGTCTCCGCA
TCGGATTTACTCATGGCCACACCATCATCCCGCCGGGGGACGCCGATGCC
CTTCTGATCGCTGCCCGCCAGATGGATGTTGACATACTGCTATGGGGTGG
AACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAGGTTCTTTATCAACC
CGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACTGGCCGGAAGGGGAA
GAGCCGACACCTAGTTTCTGTTTGATGGATGTAAGTCGCGCAACTCCACG
GGGTTCGCTGCAAGACTCGGTACGTGCTCTATGCTAACACAGGATTATAG
ATCCAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGC
CGACGGGGTTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACA
ATATCCCTTCTTCATGA
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Coding sequence (CDS) from alignment at ch8:2294175..2294991+

>KYF_010781-T1 ID=KYF_010781-T1|Name=KYF_010781-T1|organism=Aspergillus niger KYF3|type=CDS|length=1764bp|location=Sequence derived from alignment at ch8:2294175..2294991+ (Aspergillus niger KYF3)
ATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCCCGACAG
AGCCCCCTTCCGGAAACTCCTGACGCCAGGCAAGATCGGCCAGATCCTCT
GTCTCGGCAATCTCACCGATCGGAGCACTTTCGAATTCCTCCGACAGGTC
GCTCCAGACTTGCAATTGGTCAAAGGCGACTTCGATGTCGATTCCCCCAA
CCTACCCCTCTCTAAAGTGGTGACTCACGGGAGTCTCCGCATCGGATTTA
CTCATGGCCACACCATCATCCCGCCGGGGGACGCCGATGCCCTTCTGATC
GCTGCCCGCCAGATGGATGTTGACATACTGCTATGGGGTGGAACCCACCG
CTTTGAAGCTTTTGAACTGGAGGGAAGGTTCTTTATCAACCCGGGAAGTG
CCACCGGTGCCATGAGCACGGGGTACTGGCCGGAAGGGGAAGAGCCGACA
CCTAGTTTCTGTTTGATGGATATCCAAGGCGATGTCCTCGTGTTGTATGT
TTACCAACTGAAGACGGACGCCGACGGGGTTGAGACGGTCGCGGTCGAGA
AAGTATCTTACCGCAAGAACAATATCCCTTCTTCATGAATGACTTCCCGC
CTGGTTCTGGTCATTGGTGACCTCTTCATCCCCGACAGAGCCCCCTTCCG
GAAACTCCTGACGCCAGGCAAGATCGGCCAGATCCTCTGTCTCGGCAATC
TCACCGATCGGAGCACTTTCGAATTCCTCCGACAGGTCGCTCCAGACTTG
CAATTGGTCAAAGGCGACTTCGATGTCGATTCCCCCAACCTACCCCTCTC
TAAAGTGGTGACTCACGGGAGTCTCCGCATCGGATTTACTCATGGCCACA
CCATCATCCCGCCGGGGGACGCCGATGCCCTTCTGATCGCTGCCCGCCAG
ATGGATGTTGACATACTGCTATGGGGTGGAACCCACCGCTTTGAAGCTTT
TGAACTGGAGGGAAGGTTCTTTATCAACCCGGGAAGTGCCACCGGTGCCA
TGAGCACGGGGTACTGGCCGGAAGGGGAAGAGCCGACACCTAGTTTCTGT
TTGATGGATATCCAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAA
GACGGACGCCGACGGGGTTGAGACGGTCGCGGTCGAGAAAGTATCTTACC
GCAAGAACAATATCCCTTCTTCATGAATGACTTCCCGCCTGGTTCTGGTC
ATTGGTGACCTCTTCATCCCCGACAGAGCCCCCTTCCGGAAACTCCTGAC
GCCAGGCAAGATCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGA
GCACTTTCGAATTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAA
GGCGACTTCGATGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGAC
TCACGGGAGTCTCCGCATCGGATTTACTCATGGCCACACCATCATCCCGC
CGGGGGACGCCGATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGAC
ATACTGCTATGGGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGG
AAGGTTCTTTATCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGT
ACTGGCCGGAAGGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATATC
CAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGCCGA
CGGGGTTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACAATA
TCCCTTCTTCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Biological Process
TermDefinition
GO:0042147retrograde transport, endosome to Golgi
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_010781KYF_010781Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010781-T1.exon1KYF_010781-T1.exon1Aspergillus niger KYF3exon
KYF_010781-T1.exon2KYF_010781-T1.exon2Aspergillus niger KYF3exon
KYF_010781-T1.exon3KYF_010781-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010781-T1.cdsKYF_010781-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_010781-T1KYF_010781-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092640ZF
DBxrefInterPro:IPR028661
DBxrefInterPro:IPR024654
DBxrefInterPro:IPR029052
DBxrefInterPro:IPR000979
DBxrefPFAM:PF12850
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2294175..2294991 +
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