You are here

Home

KYF_010838-T1, KYF_010838-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_010838-T1
Unique NameKYF_010838-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2458423..2459575+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_010838-T1 ID=KYF_010838-T1|Name=KYF_010838-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1153bp|location=Sequence derived from alignment at ch8:2458423..2459575+ (Aspergillus niger KYF3)
ATGGTAAGATCGCTCCTTTGTGCAGCGAAATTTCTTTTGTCTCTATGACT
AAAACCTAAACTTTCCTCTCTTTAGGCTCCCACAGAGTCCAAGAAGCGCC
TCGCGCTCGCCATCATTGACTTCCTCGGTGCCAGCTTGAAGGATGGCACC
CTTACCGCCGACGATGCCGAATCCATCGAGATCGCCCAGTCCTGTATCGC
CGACACCTTCAAGGTTGACCCCTCCAACGAGGCTGCTGTGAAGGATGCCG
TGGGTGGACAGTCTCTGGCCAGCATCTACAGTGTCTACGAGAAGCTTCGC
AACAAGCCCACCGGCGACTCTGCCAAGGCTGGCGAAAGCCAGAAGCCTGC
GGCTGGCGCTCCCACCCCCGAGTCCGATAAGCTGAAGTCCGAGGGTAACG
GTGCCATGGCCCGCAAGGACTACAGCACCGCTATTGACCTCTACACCCAA
GCCCTGGCTATTGCTCCCTCGAACCCCATCTACCTCTCCAACCGGGCTGC
TGCCTATTCCGCGGCCGGACAGCACGAGAAGGCGGCCGAGGATGCCGAGC
TCGCCACTGCTGTTGACCCCAAGTACTCCAAGGCCTGGAGCCGTCTGGGA
CTGGCTCGTTTCGACTTGGCTGATTACCACGGTGCCAAGGAGGCCTATGA
GAAGGGTATCGAGGCTGAGGGCAACGGCGGCAGCGAGGCCATGAAGCGGG
GTCTGGAGACTACTAAGCGCAAGATCGAGGAGGCCAAGCGTAGCACCGAG
CCTCCCGCTGATGCTGTTGACGATGCTGCTGGTGCTTCCCGTGGTGGTGG
CGGTATGCCTGATCTGTCTTCCCTTGCTAGCATGCTGGGAGGTGGAGGTG
GCGGCGGCGGTATGCCCGACCTCAGCTCTATCATGAGCAACCCCATGTTC
GCCAGCATGGCCCAGAACCTGATGAGCAACCCCGATATGCTCAACAACCT
CATGAGCAACCCCCAGCTGAGACAGATGGCTGAAAACTATGGCCGTGGCG
GTGGTATGCCCGACATGTCCTCTTTGATGAGCGATCCCAACATTGCCGAT
ATGTAAGTAATATGACATACCTGGTCCATTGCGTTGCAGCTGACATGTAT
TTTCTAGGGCTCGTAACATGATGGGCGGCGGTGCCGGACGTGGAAACCAG
TAA
back to top

Coding sequence (CDS) from alignment at ch8:2458423..2459575+

>KYF_010838-T1 ID=KYF_010838-T1|Name=KYF_010838-T1|organism=Aspergillus niger KYF3|type=CDS|length=3078bp|location=Sequence derived from alignment at ch8:2458423..2459575+ (Aspergillus niger KYF3)
ATGGCTCCCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGACTT
CCTCGGTGCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGAAT
CCATCGAGATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACCCC
TCCAACGAGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCCAG
CATCTACAGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTCTG
CCAAGGCTGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCGAG
TCCGATAAGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTA
CAGCACCGCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGA
ACCCCATCTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAG
CACGAGAAGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAA
GTACTCCAAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGCTG
ATTACCACGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGGGC
AACGGCGGCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAA
GATCGAGGAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGACG
ATGCTGCTGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTTCC
CTTGCTAGCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGACCT
CAGCTCTATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCTGA
TGAGCAACCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGAGA
CAGATGGCTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCCTC
TTTGATGAGCGATCCCAACATTGCCGATATGGCTCGTAACATGATGGGCG
GCGGTGCCGGACGTGGAAACCAGTAAATGGCTCCCACAGAGTCCAAGAAG
CGCCTCGCGCTCGCCATCATTGACTTCCTCGGTGCCAGCTTGAAGGATGG
CACCCTTACCGCCGACGATGCCGAATCCATCGAGATCGCCCAGTCCTGTA
TCGCCGACACCTTCAAGGTTGACCCCTCCAACGAGGCTGCTGTGAAGGAT
GCCGTGGGTGGACAGTCTCTGGCCAGCATCTACAGTGTCTACGAGAAGCT
TCGCAACAAGCCCACCGGCGACTCTGCCAAGGCTGGCGAAAGCCAGAAGC
CTGCGGCTGGCGCTCCCACCCCCGAGTCCGATAAGCTGAAGTCCGAGGGT
AACGGTGCCATGGCCCGCAAGGACTACAGCACCGCTATTGACCTCTACAC
CCAAGCCCTGGCTATTGCTCCCTCGAACCCCATCTACCTCTCCAACCGGG
CTGCTGCCTATTCCGCGGCCGGACAGCACGAGAAGGCGGCCGAGGATGCC
GAGCTCGCCACTGCTGTTGACCCCAAGTACTCCAAGGCCTGGAGCCGTCT
GGGACTGGCTCGTTTCGACTTGGCTGATTACCACGGTGCCAAGGAGGCCT
ATGAGAAGGGTATCGAGGCTGAGGGCAACGGCGGCAGCGAGGCCATGAAG
CGGGGTCTGGAGACTACTAAGCGCAAGATCGAGGAGGCCAAGCGTAGCAC
CGAGCCTCCCGCTGATGCTGTTGACGATGCTGCTGGTGCTTCCCGTGGTG
GTGGCGGTATGCCTGATCTGTCTTCCCTTGCTAGCATGCTGGGAGGTGGA
GGTGGCGGCGGCGGTATGCCCGACCTCAGCTCTATCATGAGCAACCCCAT
GTTCGCCAGCATGGCCCAGAACCTGATGAGCAACCCCGATATGCTCAACA
ACCTCATGAGCAACCCCCAGCTGAGACAGATGGCTGAAAACTATGGCCGT
GGCGGTGGTATGCCCGACATGTCCTCTTTGATGAGCGATCCCAACATTGC
CGATATGGCTCGTAACATGATGGGCGGCGGTGCCGGACGTGGAAACCAGT
AAATGGCTCCCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGAC
TTCCTCGGTGCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGA
ATCCATCGAGATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACC
CCTCCAACGAGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCC
AGCATCTACAGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTC
TGCCAAGGCTGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCG
AGTCCGATAAGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGAC
TACAGCACCGCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTC
GAACCCCATCTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGAC
AGCACGAGAAGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCC
AAGTACTCCAAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGC
TGATTACCACGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGG
GCAACGGCGGCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGC
AAGATCGAGGAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGA
CGATGCTGCTGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTT
CCCTTGCTAGCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGAC
CTCAGCTCTATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCT
GATGAGCAACCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGA
GACAGATGGCTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCC
TCTTTGATGAGCGATCCCAACATTGCCGATATGGCTCGTAACATGATGGG
CGGCGGTGCCGGACGTGGAAACCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_010838KYF_010838Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010838-T1.exon1KYF_010838-T1.exon1Aspergillus niger KYF3exon
KYF_010838-T1.exon2KYF_010838-T1.exon2Aspergillus niger KYF3exon
KYF_010838-T1.exon3KYF_010838-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010838-T1.cdsKYF_010838-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_010838-T1KYF_010838-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR032374
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR006636
DBxrefPFAM:PF13181
DBxrefPFAM:PF16546
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2458423..2459575 +
Powered by Drupal