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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2535986..2538074+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_010871-T1 ID=KYF_010871-T1|Name=KYF_010871-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2089bp|location=Sequence derived from alignment at ch8:2535986..2538074+ (Aspergillus niger KYF3)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
CGTACAGATCTCAGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAATTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAACTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCATGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTGGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATTTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACTCTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGTCTCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCC
GATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTC
ACAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGGTAAGCTGTACTCGA
CATTCCTTTTCTGACATATCCCTGACTAACCATGACACAGCGCGTGGAAT
TGCTCAATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGAC
ATCGACAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAA
GTTGGACGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAG
ACGACCAGTCGGCGGCGAATCTGTCGAAGCTGTTGCAAAGAGCTCACCAA
TGGAAGCAGCAACAGCAACAACAGGGGGATGGAGCATAG back to topCoding sequence (CDS) from alignment at ch8:2535986..2538074+ >KYF_010871-T1 ID=KYF_010871-T1|Name=KYF_010871-T1|organism=Aspergillus niger KYF3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch8:2535986..2538074+ (Aspergillus niger KYF3)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
CGTACAGATCTCAGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAATTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAACTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCATGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTGGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATTTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACTCTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGTCTCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCC
GATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTC
ACAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTC
AATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGACATCGA
CAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGG
ACGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAGACGAC
CAGTCGGCGGCGAATCTGTCGAAGCTGTTGCAAAGAGCTCACCAATGGAA
GCAGCAACAGCAACAACAGGGGGATGGAGCATAGATGGAGTCGTCACGCG
GCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCCCGTACAGATCTCAGCG
GAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGGAGCCCGCATTGCAGGC
GCCGACGCAGCGCTTTGCCGACCTGGAAGAATTGCACGAATACCAGGGCC
GCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCGGAACCGAATTAACATG
AACAACTGGATGCGCTATGCGGCATGGGAGCTGGAGCAAAAGGAGTTCCG
CCGGGCGCGTTCAATCTTTGAACGGGCGCTGGACGTCAGCCCGACCTCGG
TGGTTCTGTGGATTCGGTACATCGAGTCGGAGATGCGGAATCGCAACATC
AATCATGCCAGGAACTTGCTCGACCGTGCGGTGACGATCTTGCCTCGGGT
GGATAAACTGTGGTACAAGTATGTCTACATGGAGGAGACACTGGGCAACA
TTGCGGGTACACGACAGGTCTTTGAGCGGTGGATGTCTTGGGAGCCGGAA
GAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAAAGCGGTACAATGAGTT
CGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACCATTGTTCACCCTGAAC
CACGCAATTGGATCAAGTGGGCTCGGTTTGAAGAGGAGTATGGAACGAGC
GATCTCGTGCGGGAGGTGTATGGAATGGCGATTGAGACTCTGGGAGAGGA
TTTCATGGACGAGAAGCTCTTCATCGGCTATGCCAAGTTCGAGGCGAAGT
TGAAGGAGTACGAACGTGCCCGGGCGATTTACAAGTATGCCTTAGACCGA
CTTCCTCGCTCAAAGTCCATGGCCCTTCACAAGTCCTATACAACATTCGA
GAAACAATATGGTGACCGGGAAGGCGTTGAGGATGTTATTCTCTCAAAAC
GCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAACTCGCGGAACTACGAC
ATATGGTTCGACTTTGCCCGGCTGGAGGAAACCTCGGGTGACCCCGACCG
AGTACGCGACATCTACGAACGCGCAATCGCTCAGATACCACCATCGCAGG
AGAAGCGGCACTGGAGACGGTATATCTACCTGTGGGTATTCTACGCCATT
TGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTGCGCGCCAAATTTACAA
CGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTCACCTTTGCCAAGATCT
GGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGATGAATCTCCAAGCCGCT
CGTAAGACGCTTGGCCAGGCCATCGGCATGTGCCCGAAGGATAAACTCTT
CCGGGGATACATTGATCTAGAGCGCCAGCTGTTCGAGTTCGTGCGGTGCC
GGACACTGTTCGAAAAGCAGATCGAGTGGAATCCTTCCAACAGCCAGTCA
TGGATCAAGTATGCCGAATTGGAGCGCGGGCTGGACGACACCGACCGTGC
ACGAGCCATCTACGAGCTTGGAATTGACCAGCCGACTCTCGATATGCCCG
AGTTGGTGTGGAAGTCGTACATTGACTTTGAGGAGTACGAAGGCGAATAC
GACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGGAGAAGACAGATCACGT
CAAGGTGTGGATTAACTACGCCCGCTTCGAGATCAACGTCTCCGACGAGG
AAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCCGATCAGCGAGGATGCC
AAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCACAAGGTGTTCAAGGA
GAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTCAATGCTTGGCGGTCAT
TCGAGCACACGCACGGTTCACCAGAAGACATCGACAAGATCGAGAAACAG
ATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGGACGACGATCGGTACGA
GGAGTACATGGATTACGTATTCCCAGCAGACGACCAGTCGGCGGCGAATC
TGTCGAAGCTGTTGCAAAGAGCTCACCAATGGAAGCAGCAACAGCAACAA
CAGGGGGATGGAGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR019734 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR003107 |
| DBxref | PFAM:PF02184 |
| Product | NineTeen Complex (NTC) component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2535986..2538074 + |
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