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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2844239..2845016- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_010960-T1 ID=KYF_010960-T1|Name=KYF_010960-T1|organism=Aspergillus niger KYF3|type=mRNA|length=778bp|location=Sequence derived from alignment at ch8:2844239..2845016- (Aspergillus niger KYF3)
ATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAGTAAGGATGATT
TGTGTGTGGCCCAGATTTCCTCAGCTGCTGACAGTTCCGCAGCTCAGGTC
ACTCTGGGCGGTTCGGACATGAGTTTCTAGGTAGGTTCCCCGCGATGGTC
TACAGCTCGAGCTTCCCTATTAACAGAGCTTAAGAGTTCGACTTCCGTAC
CCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACT
ACCGCAATGATTCCCTGATCCGGAAAGAAAGTGAGTGCTAGGAAAGGGCC
GTCCGGTTCTACATCGATTCGCTAATGGGCGATCACTACAGTGTGCGTGA
GCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATC
ATGAAGTGAGTCAATCAGTGGGGTTCAATGGCGGTTGGTGGGGGTAAAAA
GATGCTGATGCGACGCAGGGAGGATGATTCCAAATGGCCTCAGAAGAACA
AGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCC
TTTGAGGTATGTCCATCGCCTCATTGACATAGATACTAACAGACGGGAAC
CTGACATCTGTTGTAGACTGCGAAAATCGGCTCATTGGTGGATGTGACTG
AATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGAC
CTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGTAAACAC
AGCTCCTTTGTCTCTTGCTACTCTATGA back to topCoding sequence (CDS) from alignment at ch8:2844239..2845016- >KYF_010960-T1 ID=KYF_010960-T1|Name=KYF_010960-T1|organism=Aspergillus niger KYF3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch8:2844239..2845016- (Aspergillus niger KYF3)
ACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGA
AGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCT
TCTCGCTTATTTCGCTCCATTTCAAGGTAAACACAGCTCCTTTGTCTCTT
GCTACTCTATGAGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATG
GACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAG
TGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAA
AGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCG
CTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCTGATC
CGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGAT
GTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAACTGCGAAAATCGG
CTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCT
TCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCG
CTCCATTTCAAGGTAAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGG
AGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTT
GAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCG
TCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAA
AGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATAT
GCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCA
GGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCG
AACCATTCTACCTCCGCTACTAACTGCGAAAATCGGCTCATTGGTGGATG
TGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTC
CAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGT
AAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGGAGGATGATTCCAAA
TGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGG
GAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGA
AGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGT
ACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAA
CTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCG
GTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCATTCTACCTC
CGCTACTAACTGCGAAAATCGGCTCATTGGTGGATGTGACTGAATCTGCG
GACCCGGAAGGCCTACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGC
CCTCATCTTCTCGCTTATTTCGCTCCATTTCAAGGTAAACACAGCTCCTT
TGTCTCTTGCTACTCTATGAGGAGGATGATTCCAAATGGCCTCAGAAGAA
CAAGGATGGACGTCAGGAACTTGAGATTCGGCTCGGGAACGAGCATATCT
CCTTTGAGTGTGCGTGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCA
TCAAGGAAAGTGAGATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGG
CCGTAGCGCTGCCGTGCGATATGCGAACAACTCCAACTACCGCAATGATT
CCCTGATCCGGAAAGAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGT
TTCTAGATGTCGACCCAAGGCGAACCATTCTACCTCCGCTACTAACTGCG
AAAATCGGCTCATTGGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCT
ACGAGTCTTCTACTATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGC
TTATTTCGCTCCATTTCAAGGTAAACACAGCTCCTTTGTCTCTTGCTACT
CTATGAGGAGGATGATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTC
AGGAACTTGAGATTCGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCG
TGAGCGCGTCGATGATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAG
ATCATGAAAGTTCGACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCG
TGCGATATGCGAACAACTCCAACTACCGCAATGATTCCCTGATCCGGAAA
GAAACTCAGGTCACTCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGAC
CCAAGGCGAACCATTCTACCTCCGCTACTAACTGCGAAAATCGGCTCATT
GGTGGATGTGACTGAATCTGCGGACCCGGAAGGCCTACGAGTCTTCTACT
ATCTCGTCCAGGACCTGAAGGCCCTCATCTTCTCGCTTATTTCGCTCCAT
TTCAAGGTAAACACAGCTCCTTTGTCTCTTGCTACTCTATGAGGAGGATG
ATTCCAAATGGCCTCAGAAGAACAAGGATGGACGTCAGGAACTTGAGATT
CGGCTCGGGAACGAGCATATCTCCTTTGAGTGTGCGTGAGCGCGTCGATG
ATTCAGGAAGTGAAGCGCATCATCAAGGAAAGTGAGATCATGAAAGTTCG
ACTTCCGTACCCTTGGCGATGGCCGTAGCGCTGCCGTGCGATATGCGAAC
AACTCCAACTACCGCAATGATTCCCTGATCCGGAAAGAAACTCAGGTCAC
TCTGGGCGGTTCGGACATGAGTTTCTAGATGTCGACCCAAGGCGAACCAT
TCTACCTCCGCTACTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0035145 | exon-exon junction complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008380 | RNA splicing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036605 |
| DBxref | InterPro:IPR004023 |
| DBxref | PFAM:PF02792 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2844239..2845016 - |
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