You are here

Home

KYF_011222-T1, KYF_011222-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011222-T1
Unique NameKYF_011222-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3650682..3652151+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011222-T1 ID=KYF_011222-T1|Name=KYF_011222-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1470bp|location=Sequence derived from alignment at ch8:3650682..3652151+ (Aspergillus niger KYF3)
ATGAGCGACATCACTCACCCCACCATCAAGGGTATGTAGTATTTCCCTTA
TCCGCACCATCCACCACCCTTCCATCACCTCGCTGTTTACCCCACCTCCT
GTTCTCTTCTCAATCCCCAAACCTACTCTCCAGATCTGTTCAATGGATCA
ATGCCCGCTTATGACGCCTCAATGAGCGCAATCTCGCCCCAAGACGATGT
CATTCCACTTGCTACCCCTCTTACGAAATTTACCCCTCGCTAACATTGGT
CCTTCCCATTTTCTGCAGATGGCTGGTTCTCCGAGCAGTCTGACATGTGG
CCCGGCCAGGCCATGAACCTTAAGGTTAACCAGATCCTCCACCACGAGAA
GTCCAAGTACCAGGATGTTCTTGTTTTCGAGAGCAGCGACTACGGCACCG
TCCTCGTCCTCGACAATGTCATCCAGTGCACTGAGCGCGATGAGTTCTCG
TATGTTGAAATTCTTACCACGAGCTATTTATACCCGGAAGCACCATTGGC
GCTAACGTTATATGACCATAGCTACCAGGAGATGATCACCCACCTCGCCA
TGAACTCCCACCCCAACCCCAAGAAGGTCCTGGTCATCGGTGGTGGTGAT
GGTGGTGTCCTCCGTGAGGTCGTCAAGCACGAGACCGTCGAGGAGGCCAC
CCTGTGCGACATTGATGAGGTAAAATAACAAAAAGAAATCCCCGTGTGCT
CGTGCTGTGTATGTGAATATCTGGCTCATGGTTTCTTAGGCTGTCATCCG
TGTCTCCAAGAAGTACCTTCCTGGCATGAGCATTGGCTTCCAGCACCCCA
ACGTCAAGGTCCACGTTGGCGATGGTTTCCAGTTCCTCAAGGAGCGCCAG
AACGAGTTCGATGTTATCATCACTGACAGCTCTGACCCCGAGGGTCCCGC
TGAGAGCCTCTTCCAGAAGCCCTACTTTGAGCTTCTGCGCGATGCGCTCC
GTGAGGGAGGTGTCATCACCACACAAGGTTGTTCGTCGCCTTTCATTAAT
CCCTTCTTGCCCTTTACATCTCACTTCTCTCTCCCCTCCTTGACTCCTCT
ATATCCCCCCAAATCTCTACGTACTATTTGTGTTATTTGTATTTTCTCGT
CGCGAACTATGAAGCTAACCTTGTTACGCCCCAAACCACCCGACCCCTAA
CCCGGGATCGGTTTGGGTTCGTGTTTTCTACCCATACAGCCGAGAACCAA
TGGCTGCACCTGTCTCTGATCACCGACCTCAAGAAGGCCTGCAAGGAGGT
TTTCCCCGTTGCCGAATACGCCTACACCACCATCCCCACCTACCCCTCCG
GCCAGATCGGCTTCATGGTCTGCTGCAAGGATGCCACTCGTAACGTCAAG
GAGCCCGTTCGCAGCTGGACCCGTGAGGAGGAGGAGAAGCTCTGCCGCTA
CTACAACCAGGACATCCACCGTGCCAGCTTCGTTCTCCCCAACTTCGCCC
GCAAGGCTCTGGATGCTTAG
back to top

Coding sequence (CDS) from alignment at ch8:3650682..3652151+

>KYF_011222-T1 ID=KYF_011222-T1|Name=KYF_011222-T1|organism=Aspergillus niger KYF3|type=CDS|length=4410bp|location=Sequence derived from alignment at ch8:3650682..3652151+ (Aspergillus niger KYF3)
ATGAGCGACATCACTCACCCCACCATCAAGGATGGCTGGTTCTCCGAGCA
GTCTGACATGTGGCCCGGCCAGGCCATGAACCTTAAGGTTAACCAGATCC
TCCACCACGAGAAGTCCAAGTACCAGGATGTTCTTGTTTTCGAGAGCAGC
GACTACGGCACCGTCCTCGTCCTCGACAATGTCATCCAGTGCACTGAGCG
CGATGAGTTCTCCTACCAGGAGATGATCACCCACCTCGCCATGAACTCCC
ACCCCAACCCCAAGAAGGTCCTGGTCATCGGTGGTGGTGATGGTGGTGTC
CTCCGTGAGGTCGTCAAGCACGAGACCGTCGAGGAGGCCACCCTGTGCGA
CATTGATGAGGCTGTCATCCGTGTCTCCAAGAAGTACCTTCCTGGCATGA
GCATTGGCTTCCAGCACCCCAACGTCAAGGTCCACGTTGGCGATGGTTTC
CAGTTCCTCAAGGAGCGCCAGAACGAGTTCGATGTTATCATCACTGACAG
CTCTGACCCCGAGGGTCCCGCTGAGAGCCTCTTCCAGAAGCCCTACTTTG
AGCTTCTGCGCGATGCGCTCCGTGAGGGAGGTGTCATCACCACACAAGGT
TCCGAGAACCAATGGCTGCACCTGTCTCTGATCACCGACCTCAAGAAGGC
CTGCAAGGAGGTTTTCCCCGTTGCCGAATACGCCTACACCACCATCCCCA
CCTACCCCTCCGGCCAGATCGGCTTCATGGTCTGCTGCAAGGATGCCACT
CGTAACGTCAAGGAGCCCGTTCGCAGCTGGACCCGTGAGGAGGAGGAGAA
GCTCTGCCGCTACTACAACCAGGACATCCACCGTGCCAGCTTCGTTCTCC
CCAACTTCGCCCGCAAGGCTCTGGATGCTTAGATGAGCGACATCACTCAC
CCCACCATCAAGGATGGCTGGTTCTCCGAGCAGTCTGACATGTGGCCCGG
CCAGGCCATGAACCTTAAGGTTAACCAGATCCTCCACCACGAGAAGTCCA
AGTACCAGGATGTTCTTGTTTTCGAGAGCAGCGACTACGGCACCGTCCTC
GTCCTCGACAATGTCATCCAGTGCACTGAGCGCGATGAGTTCTCCTACCA
GGAGATGATCACCCACCTCGCCATGAACTCCCACCCCAACCCCAAGAAGG
TCCTGGTCATCGGTGGTGGTGATGGTGGTGTCCTCCGTGAGGTCGTCAAG
CACGAGACCGTCGAGGAGGCCACCCTGTGCGACATTGATGAGGCTGTCAT
CCGTGTCTCCAAGAAGTACCTTCCTGGCATGAGCATTGGCTTCCAGCACC
CCAACGTCAAGGTCCACGTTGGCGATGGTTTCCAGTTCCTCAAGGAGCGC
CAGAACGAGTTCGATGTTATCATCACTGACAGCTCTGACCCCGAGGGTCC
CGCTGAGAGCCTCTTCCAGAAGCCCTACTTTGAGCTTCTGCGCGATGCGC
TCCGTGAGGGAGGTGTCATCACCACACAAGGTTCCGAGAACCAATGGCTG
CACCTGTCTCTGATCACCGACCTCAAGAAGGCCTGCAAGGAGGTTTTCCC
CGTTGCCGAATACGCCTACACCACCATCCCCACCTACCCCTCCGGCCAGA
TCGGCTTCATGGTCTGCTGCAAGGATGCCACTCGTAACGTCAAGGAGCCC
GTTCGCAGCTGGACCCGTGAGGAGGAGGAGAAGCTCTGCCGCTACTACAA
CCAGGACATCCACCGTGCCAGCTTCGTTCTCCCCAACTTCGCCCGCAAGG
CTCTGGATGCTTAGATGAGCGACATCACTCACCCCACCATCAAGGATGGC
TGGTTCTCCGAGCAGTCTGACATGTGGCCCGGCCAGGCCATGAACCTTAA
GGTTAACCAGATCCTCCACCACGAGAAGTCCAAGTACCAGGATGTTCTTG
TTTTCGAGAGCAGCGACTACGGCACCGTCCTCGTCCTCGACAATGTCATC
CAGTGCACTGAGCGCGATGAGTTCTCCTACCAGGAGATGATCACCCACCT
CGCCATGAACTCCCACCCCAACCCCAAGAAGGTCCTGGTCATCGGTGGTG
GTGATGGTGGTGTCCTCCGTGAGGTCGTCAAGCACGAGACCGTCGAGGAG
GCCACCCTGTGCGACATTGATGAGGCTGTCATCCGTGTCTCCAAGAAGTA
CCTTCCTGGCATGAGCATTGGCTTCCAGCACCCCAACGTCAAGGTCCACG
TTGGCGATGGTTTCCAGTTCCTCAAGGAGCGCCAGAACGAGTTCGATGTT
ATCATCACTGACAGCTCTGACCCCGAGGGTCCCGCTGAGAGCCTCTTCCA
GAAGCCCTACTTTGAGCTTCTGCGCGATGCGCTCCGTGAGGGAGGTGTCA
TCACCACACAAGGTTCCGAGAACCAATGGCTGCACCTGTCTCTGATCACC
GACCTCAAGAAGGCCTGCAAGGAGGTTTTCCCCGTTGCCGAATACGCCTA
CACCACCATCCCCACCTACCCCTCCGGCCAGATCGGCTTCATGGTCTGCT
GCAAGGATGCCACTCGTAACGTCAAGGAGCCCGTTCGCAGCTGGACCCGT
GAGGAGGAGGAGAAGCTCTGCCGCTACTACAACCAGGACATCCACCGTGC
CAGCTTCGTTCTCCCCAACTTCGCCCGCAAGGCTCTGGATGCTTAGATGA
GCGACATCACTCACCCCACCATCAAGGATGGCTGGTTCTCCGAGCAGTCT
GACATGTGGCCCGGCCAGGCCATGAACCTTAAGGTTAACCAGATCCTCCA
CCACGAGAAGTCCAAGTACCAGGATGTTCTTGTTTTCGAGAGCAGCGACT
ACGGCACCGTCCTCGTCCTCGACAATGTCATCCAGTGCACTGAGCGCGAT
GAGTTCTCCTACCAGGAGATGATCACCCACCTCGCCATGAACTCCCACCC
CAACCCCAAGAAGGTCCTGGTCATCGGTGGTGGTGATGGTGGTGTCCTCC
GTGAGGTCGTCAAGCACGAGACCGTCGAGGAGGCCACCCTGTGCGACATT
GATGAGGCTGTCATCCGTGTCTCCAAGAAGTACCTTCCTGGCATGAGCAT
TGGCTTCCAGCACCCCAACGTCAAGGTCCACGTTGGCGATGGTTTCCAGT
TCCTCAAGGAGCGCCAGAACGAGTTCGATGTTATCATCACTGACAGCTCT
GACCCCGAGGGTCCCGCTGAGAGCCTCTTCCAGAAGCCCTACTTTGAGCT
TCTGCGCGATGCGCTCCGTGAGGGAGGTGTCATCACCACACAAGGTTCCG
AGAACCAATGGCTGCACCTGTCTCTGATCACCGACCTCAAGAAGGCCTGC
AAGGAGGTTTTCCCCGTTGCCGAATACGCCTACACCACCATCCCCACCTA
CCCCTCCGGCCAGATCGGCTTCATGGTCTGCTGCAAGGATGCCACTCGTA
ACGTCAAGGAGCCCGTTCGCAGCTGGACCCGTGAGGAGGAGGAGAAGCTC
TGCCGCTACTACAACCAGGACATCCACCGTGCCAGCTTCGTTCTCCCCAA
CTTCGCCCGCAAGGCTCTGGATGCTTAGATGAGCGACATCACTCACCCCA
CCATCAAGGATGGCTGGTTCTCCGAGCAGTCTGACATGTGGCCCGGCCAG
GCCATGAACCTTAAGGTTAACCAGATCCTCCACCACGAGAAGTCCAAGTA
CCAGGATGTTCTTGTTTTCGAGAGCAGCGACTACGGCACCGTCCTCGTCC
TCGACAATGTCATCCAGTGCACTGAGCGCGATGAGTTCTCCTACCAGGAG
ATGATCACCCACCTCGCCATGAACTCCCACCCCAACCCCAAGAAGGTCCT
GGTCATCGGTGGTGGTGATGGTGGTGTCCTCCGTGAGGTCGTCAAGCACG
AGACCGTCGAGGAGGCCACCCTGTGCGACATTGATGAGGCTGTCATCCGT
GTCTCCAAGAAGTACCTTCCTGGCATGAGCATTGGCTTCCAGCACCCCAA
CGTCAAGGTCCACGTTGGCGATGGTTTCCAGTTCCTCAAGGAGCGCCAGA
ACGAGTTCGATGTTATCATCACTGACAGCTCTGACCCCGAGGGTCCCGCT
GAGAGCCTCTTCCAGAAGCCCTACTTTGAGCTTCTGCGCGATGCGCTCCG
TGAGGGAGGTGTCATCACCACACAAGGTTCCGAGAACCAATGGCTGCACC
TGTCTCTGATCACCGACCTCAAGAAGGCCTGCAAGGAGGTTTTCCCCGTT
GCCGAATACGCCTACACCACCATCCCCACCTACCCCTCCGGCCAGATCGG
CTTCATGGTCTGCTGCAAGGATGCCACTCGTAACGTCAAGGAGCCCGTTC
GCAGCTGGACCCGTGAGGAGGAGGAGAAGCTCTGCCGCTACTACAACCAG
GACATCCACCGTGCCAGCTTCGTTCTCCCCAACTTCGCCCGCAAGGCTCT
GGATGCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006595polyamine metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPE3KYF_011222Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011222-T1KYF_011222-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011222-T1.exon1KYF_011222-T1.exon1Aspergillus niger KYF3exon
KYF_011222-T1.exon2KYF_011222-T1.exon2Aspergillus niger KYF3exon
KYF_011222-T1.exon3KYF_011222-T1.exon3Aspergillus niger KYF3exon
KYF_011222-T1.exon4KYF_011222-T1.exon4Aspergillus niger KYF3exon
KYF_011222-T1.exon5KYF_011222-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011222-T1.cdsKYF_011222-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR030374
DBxrefInterPro:IPR030373
DBxrefInterPro:IPR030668
DBxrefInterPro:IPR035246
DBxrefInterPro:IPR001045
DBxrefInterPro:IPR037163
DBxrefPFAM:PF17284
DBxrefPFAM:PF01564
Productputrescine aminopropyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3650682..3652151 +
Powered by Drupal