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KYF_011278-T1, KYF_011278-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011278-T1
Unique NameKYF_011278-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3836044..3838484-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011278-T1 ID=KYF_011278-T1|Name=KYF_011278-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2441bp|location=Sequence derived from alignment at ch8:3836044..3838484- (Aspergillus niger KYF3)
ATGCCCAGATTAGATGGTAAGTATAATTCCTCCTCTCTGCTGATTGCCCG
TTGCTGATGCATCCAGACTCGGAAACGATCCGCATTCTTGTCTCTACAGA
CAACCATGTCGGATACAATGAACGGGATCCCATCCGTGGTGATGACAGCT
GGAAAAGCTTTCATGAGGTAATGTGTCTGGCCAAGGAACAAGATGTGGAC
ATGGTGCTTCTGGCAGGCGATCTCTTCCACGAGAACAAGCCATCGCGCAA
GTCCATGTACCAAGTTATGCGCTCCATTCGTATGAACTGTCTCGGCGATA
AGCCTTGCGAACTGGAGATGCTGAGTGATGCGAGCGAAAATTTTCAGGGT
GCTTTCAATCACGTGAACTACGAGGATTTGGATATCAATGTGGCTATCCC
CATCTTTTCAATTCACGGCAATCACGATGATCCGTCCGGAGAAGGACATC
TGGCTGCATTGGACCTACTTCAGGTGTCGGGGTTGATCAATTACTATGGA
CGGACCCCCGAGTCGGACAATATCCAGATTAAACCGGTTTTGCTCCAGAA
AGGACGCACGAAACTTGCTCTCTACGGTATGAGCAACGTCCGCGATGAGC
GTCTATTTCGCACATTTCGAGACGGCAAGGTCAAGTTCTACCAACCCTCA
ATCCAGAAAGAAGACTGGTTCAACTTGATGTCTGTCCATCAGAACCATTA
TGCACACACTGAGACAGGCTATTTGCCCGAGAATTTCCTCCCCGAATTCC
TGGACCTCGTCGTCTGGGGCCACGAACACGAGTGTTTAATCAACCCACGA
TTGAACCCCGAGACCAAGTTTCACGTCATGCAGCCCGGCTCATCCGTGGC
GACATCCCTGGTTCCTGGCGAATCAGTGGCCAAACATGTAGCCATCCTCA
GTATCACAGGCCGGGAGTTCAAATGCGAGCCCATCCGTCTCAAGTCCGTC
CGTCCATTCGCCATGCGCGAAATCATCCTCTCCGAAGAGAAAGGCGCGCA
AAAGCTTGCCCGCAAGGACAACAACCGCACGGAAGTGACTCGCCTTCTCA
TGGAGATTGTCGAGGAACTGATCGAAGAAGCGAAAACGGAATGGCTAGAA
ATGCAAGATGAGACAGCAGAAGACGAAGAGCTAGAAGTCCCACTACCACT
AGTGCGACTGCGCGTTGAAACCTCAACGCCAGAAGGAGGCAGTTATGACT
GCGAGAACCCGCAGCGATTCTCCAACCGCTTCGTAGGCAAGGTCGCCAAT
GTGAACGATGTCGTCCAGTTCTACCGCAAGAAGAAAAACACCAACAGTAC
GCGCAAACCGGGTGAAACCGACCTCGACGAGACGGCAGTCTCACACCTCT
CCACCCTCGATACCGTCAAAGTCGAACAATTAGTGCGCGACTTCCTCTCC
GCACAGTCTCTGACCATCCTCCCACAGAACTCCTTCGGCGACGCAGTCGC
CCAATTCATCGACAAAGACGACAAACATGCCTTGGAAATGTTCGTCAACG
AATCACTCGAGAGCCAAATGAAGCACTTACTGGCTCTAGATCGCGACCAC
GATCTAGAGGAAGAAGAAGAAATTGCAGAAAGCTCCCTACAAAAAGCCAT
GGAGAGATATCGCACTCAAATGGAAGACATGTTCTCCCGCGGTATCAAGA
AACGCACCCGCGGCAAGAAGCGCTTCAAGCCCAAGCCCGACGGCTGGGAC
ACCGAATTCGACGGTGTCTGGGAGGACCAACCCGGCGCTCTCATCCACTC
CGACAACGAGGACGGCGATCCCAATGAAGACGTAGCCGGCGAGGATGGCG
CCGAACCGCCCACCACATCACGAGCAACATCATCCACACGCGGCCGCGGC
CGAGGCCGTGGCGGTAGAGCCACCACCACTGCCGCTACAACCCGCAAAAC
CGCCACCACAAAAGCAGCACCTGCTACTACTACTTCAAAGAAAACCACAA
CCTCTACTAAAAGCCGTAAACGCCGCACCGTCTCCTCCGACGAAGAAGAT
GAACAAGAGGATGTCATAATGCTCGACGATGACGATGATGACGACGACGA
CGACAACGCAGCCACCTCCCTCCCCAACATAGACGAAGAGGACGATGATG
ACGATGACTCCCTCTTCGTCAAACAACCCGCCAAATCTACTACCAGTACT
AGATCTCGCAGAACAACAACAGCAGCAACAGCGAAAGCAACAACACAACG
CCGCAAAGCTCCATCTCCAGCACCTTCATCCAATACAGTTGGAGGAACCG
GACAAGCTACGCGAAGAACTCGGGGCAAGCAAGCAACCCAGACAACGCTG
AATTTTGTAGGCTCGCAAAGTAGTGTGCGAGGGACGGCGGGGTCTGGGAG
ATCAACGAGGGCTACGAGGGCGGCGAGTGAGGATATTGAGGATGATAGTG
ATGCGTTTGAGCCGATGGCTAGTAGTGCGAGGCGCAGATGA
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Coding sequence (CDS) from alignment at ch8:3836044..3838484-

>KYF_011278-T1 ID=KYF_011278-T1|Name=KYF_011278-T1|organism=Aspergillus niger KYF3|type=CDS|length=4782bp|location=Sequence derived from alignment at ch8:3836044..3838484- (Aspergillus niger KYF3)
ACTCGGAAACGATCCGCATTCTTGTCTCTACAGACAACCATGTCGGATAC
AATGAACGGGATCCCATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGA
GGTAATGTGTCTGGCCAAGGAACAAGATGTGGACATGGTGCTTCTGGCAG
GCGATCTCTTCCACGAGAACAAGCCATCGCGCAAGTCCATGTACCAAGTT
ATGCGCTCCATTCGTATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGA
GATGCTGAGTGATGCGAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGA
ACTACGAGGATTTGGATATCAATGTGGCTATCCCCATCTTTTCAATTCAC
GGCAATCACGATGATCCGTCCGGAGAAGGACATCTGGCTGCATTGGACCT
ACTTCAGGTGTCGGGGTTGATCAATTACTATGGACGGACCCCCGAGTCGG
ACAATATCCAGATTAAACCGGTTTTGCTCCAGAAAGGACGCACGAAACTT
GCTCTCTACGGTATGAGCAACGTCCGCGATGAGCGTCTATTTCGCACATT
TCGAGACGGCAAGGTCAAGTTCTACCAACCCTCAATCCAGAAAGAAGACT
GGTTCAACTTGATGTCTGTCCATCAGAACCATTATGCACACACTGAGACA
GGCTATTTGCCCGAGAATTTCCTCCCCGAATTCCTGGACCTCGTCGTCTG
GGGCCACGAACACGAGTGTTTAATCAACCCACGATTGAACCCCGAGACCA
AGTTTCACGTCATGCAGCCCGGCTCATCCGTGGCGACATCCCTGGTTCCT
GGCGAATCAGTGGCCAAACATGTAGCCATCCTCAGTATCACAGGCCGGGA
GTTCAAATGCGAGCCCATCCGTCTCAAGTCCGTCCGTCCATTCGCCATGC
GCGAAATCATCCTCTCCGAAGAGAAAGGCGCGCAAAAGCTTGCCCGCAAG
GACAACAACCGCACGGAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGA
ACTGATCGAAGAAGCGAAAACGGAATGGCTAGAAATGCAAGATGAGACAG
CAGAAGACGAAGAGCTAGAAGTCCCACTACCACTAGTGCGACTGCGCGTT
GAAACCTCAACGCCAGAAGGAGGCAGTTATGACTGCGAGAACCCGCAGCG
ATTCTCCAACCGCTTCGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCC
AGTTCTACCGCAAGAAGAAAAACACCAACAGTACGCGCAAACCGGGTGAA
ACCGACCTCGACGAGACGGCAGTCTCACACCTCTCCACCCTCGATACCGT
CAAAGTCGAACAATTAGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCA
TCCTCCCACAGAACTCCTTCGGCGACGCAGTCGCCCAATTCATCGACAAA
GACGACAAACATGCCTTGGAAATGTTCGTCAACGAATCACTCGAGAGCCA
AATGAAGCACTTACTGGCTCTAGATCGCGACCACGATCTAGAGGAAGAAG
AAGAAATTGCAGAAAGCTCCCTACAAAAAGCCATGGAGAGATATCGCACT
CAAATGGAAGACATGTTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAA
GAAGCGCTTCAAGCCCAAGCCCGACGGCTGGGACACCGAATTCGACGGTG
TCTGGGAGGACCAACCCGGCGCTCTCATCCACTCCGACAACGAGGACGGC
GATCCCAATGAAGACGTAGCCGGCGAGGATGGCGCCGAACCGCCCACCAC
ATCACGAGCAACATCATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTA
GAGCCACCACCACTGCCGCTACAACCCGCAAAACCGCCACCACAAAAGCA
GCACCTGCTACTACTACTTCAAAGAAAACCACAACCTCTACTAAAAGCCG
TAAACGCCGCACCGTCTCCTCCGACGAAGAAGATGAACAAGAGGATGTCA
TAATGCTCGACGATGACGATGATGACGACGACGACGACAACGCAGCCACC
TCCCTCCCCAACATAGACGAAGAGGACGATGATGACGATGACTCCCTCTT
CGTCAAACAACCCGCCAAATCTACTACCAGTACTAGATCTCGCAGAACAA
CAACAGCAGCAACAGCGAAAGCAACAACACAACGCCGCAAAGCTCCATCT
CCAGCACCTTCATCCAATACAGTTGGAGGAACCGGACAAGCTACGCGAAG
AACTCGGGGCAAGCAAGCAACCCAGACAACGCTGAATTTTGTAGGCTCGC
AAAGTAGTGTGCGAGGGACGGCGGGGTCTGGGAGATCAACGAGGGCTACG
AGGGCGGCGAGTGAGGATATTGAGGATGATAGTGATGCGTTTGAGCCGAT
GGCTAGTAGTGCGAGGCGCAGATGAATGCCCAGATTAGATGACTCGGAAA
CGATCCGCATTCTTGTCTCTACAGACAACCATGTCGGATACAATGAACGG
GATCCCATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGAGGTAATGTG
TCTGGCCAAGGAACAAGATGTGGACATGGTGCTTCTGGCAGGCGATCTCT
TCCACGAGAACAAGCCATCGCGCAAGTCCATGTACCAAGTTATGCGCTCC
ATTCGTATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGAGATGCTGAG
TGATGCGAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGAACTACGAGG
ATTTGGATATCAATGTGGCTATCCCCATCTTTTCAATTCACGGCAATCAC
GATGATCCGTCCGGAGAAGGACATCTGGCTGCATTGGACCTACTTCAGGT
GTCGGGGTTGATCAATTACTATGGACGGACCCCCGAGTCGGACAATATCC
AGATTAAACCGGTTTTGCTCCAGAAAGGACGCACGAAACTTGCTCTCTAC
GGTATGAGCAACGTCCGCGATGAGCGTCTATTTCGCACATTTCGAGACGG
CAAGGTCAAGTTCTACCAACCCTCAATCCAGAAAGAAGACTGGTTCAACT
TGATGTCTGTCCATCAGAACCATTATGCACACACTGAGACAGGCTATTTG
CCCGAGAATTTCCTCCCCGAATTCCTGGACCTCGTCGTCTGGGGCCACGA
ACACGAGTGTTTAATCAACCCACGATTGAACCCCGAGACCAAGTTTCACG
TCATGCAGCCCGGCTCATCCGTGGCGACATCCCTGGTTCCTGGCGAATCA
GTGGCCAAACATGTAGCCATCCTCAGTATCACAGGCCGGGAGTTCAAATG
CGAGCCCATCCGTCTCAAGTCCGTCCGTCCATTCGCCATGCGCGAAATCA
TCCTCTCCGAAGAGAAAGGCGCGCAAAAGCTTGCCCGCAAGGACAACAAC
CGCACGGAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGAACTGATCGA
AGAAGCGAAAACGGAATGGCTAGAAATGCAAGATGAGACAGCAGAAGACG
AAGAGCTAGAAGTCCCACTACCACTAGTGCGACTGCGCGTTGAAACCTCA
ACGCCAGAAGGAGGCAGTTATGACTGCGAGAACCCGCAGCGATTCTCCAA
CCGCTTCGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCCAGTTCTACC
GCAAGAAGAAAAACACCAACAGTACGCGCAAACCGGGTGAAACCGACCTC
GACGAGACGGCAGTCTCACACCTCTCCACCCTCGATACCGTCAAAGTCGA
ACAATTAGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCATCCTCCCAC
AGAACTCCTTCGGCGACGCAGTCGCCCAATTCATCGACAAAGACGACAAA
CATGCCTTGGAAATGTTCGTCAACGAATCACTCGAGAGCCAAATGAAGCA
CTTACTGGCTCTAGATCGCGACCACGATCTAGAGGAAGAAGAAGAAATTG
CAGAAAGCTCCCTACAAAAAGCCATGGAGAGATATCGCACTCAAATGGAA
GACATGTTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAAGAAGCGCTT
CAAGCCCAAGCCCGACGGCTGGGACACCGAATTCGACGGTGTCTGGGAGG
ACCAACCCGGCGCTCTCATCCACTCCGACAACGAGGACGGCGATCCCAAT
GAAGACGTAGCCGGCGAGGATGGCGCCGAACCGCCCACCACATCACGAGC
AACATCATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTAGAGCCACCA
CCACTGCCGCTACAACCCGCAAAACCGCCACCACAAAAGCAGCACCTGCT
ACTACTACTTCAAAGAAAACCACAACCTCTACTAAAAGCCGTAAACGCCG
CACCGTCTCCTCCGACGAAGAAGATGAACAAGAGGATGTCATAATGCTCG
ACGATGACGATGATGACGACGACGACGACAACGCAGCCACCTCCCTCCCC
AACATAGACGAAGAGGACGATGATGACGATGACTCCCTCTTCGTCAAACA
ACCCGCCAAATCTACTACCAGTACTAGATCTCGCAGAACAACAACAGCAG
CAACAGCGAAAGCAACAACACAACGCCGCAAAGCTCCATCTCCAGCACCT
TCATCCAATACAGTTGGAGGAACCGGACAAGCTACGCGAAGAACTCGGGG
CAAGCAAGCAACCCAGACAACGCTGAATTTTGTAGGCTCGCAAAGTAGTG
TGCGAGGGACGGCGGGGTCTGGGAGATCAACGAGGGCTACGAGGGCGGCG
AGTGAGGATATTGAGGATGATAGTGATGCGTTTGAGCCGATGGCTAGTAG
TGCGAGGCGCAGATGAATGCCCAGATTAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030870Mre11 complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:00084083'-5' exonuclease activity
GO:0030145manganese ion binding
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS23KYF_011278Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011278-T1KYF_011278-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011278-T1.cdsKYF_011278-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011278-T1.exon2KYF_011278-T1.exon2Aspergillus niger KYF3exon
KYF_011278-T1.exon1KYF_011278-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09262GVX
DBxrefInterPro:IPR041796
DBxrefInterPro:IPR029052
DBxrefInterPro:IPR004843
DBxrefInterPro:IPR038487
DBxrefInterPro:IPR003701
DBxrefInterPro:IPR007281
DBxrefPFAM:PF04152
DBxrefPFAM:PF00149
ProductDouble-strand break repair protein mus-23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3836044..3838484 -
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