You are here

Home

KYF_011396-T1, KYF_011396-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011396-T1
Unique NameKYF_011396-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4196097..4197289+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011396-T1 ID=KYF_011396-T1|Name=KYF_011396-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1193bp|location=Sequence derived from alignment at ch8:4196097..4197289+ (Aspergillus niger KYF3)
ATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGT
CGTCAGGCTAAAAAAGGGTACGTATTGATATGCATGTGTGGCCCTTCATT
TGCGATCGTCTTGCGTGGCATGTCTGTCAATAATGTGGGGAGATCATGCG
CAAATTCAGCGTAGAAAGAAAAACTGCCTGCGAAACTTCCAGTCGGCCCC
GCAACCCCGCTAACCGTTTCACCAACAGGTAAAAAGCGCTTCGAACTCGC
CTGCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATC
TCGACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCG
CAAACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCC
TGCAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTG
GCGAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTG
GATATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATAC
CCCCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTC
AACAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGC
GAGGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAA
GTCGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGC
AACCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCT
GTGTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGC
CGCGGGTGGTAAAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGA
ACAAGAAGGGTGGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAG
GATGAGGCAGGTGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAG
CAATGTCAAGGATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGG
AGGTTGTCGGCGGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGA
GCTTTCAAGGGATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGG
ACGTGTGGAGGTGCTGGATATGACGGTGACCCATGAAGAGTAA
back to top

Coding sequence (CDS) from alignment at ch8:4196097..4197289+

>KYF_011396-T1 ID=KYF_011396-T1|Name=KYF_011396-T1|organism=Aspergillus niger KYF3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch8:4196097..4197289+ (Aspergillus niger KYF3)
ATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGT
CGTCAGGCTAAAAAAGGGTAAAAAGCGCTTCGAACTCGCCTGCTACAAGA
ACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATCTCGACAATGTC
CTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCGCAAACAGCCCC
ATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCCTGCAGATGAGA
TCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAG
CGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTGGATATCGTATC
AGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATACCCCCGGAATGA
TTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTCAACAGCAGTCG
CAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGCGAGGAGAGCCG
CCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAAGTCGGCGAAGA
GTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGCAACCTATCCCT
GTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCTGTGTCACTGTT
GAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTA
AAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGAACAAGAAGGGT
GGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAGGATGAGGCAGG
TGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAGCAATGTCAAGG
ATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGGAGGTTGTCGGC
GGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGG
ATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGGACGTGTGGAGG
TGCTGGATATGACGGTGACCCATGAAGAGTAAATGCCCATCAACCAACCA
TCAAATCAGATTAAATTTACCAACGTATCAGTCGTCAGGCTAAAAAAGGG
TAAAAAGCGCTTCGAACTCGCCTGCTACAAGAACAAACTCCTCGAGTACC
GCTCCGGAGCAGAGAAGGATCTCGACAATGTCCTCCAAGTCCCCACGATC
TTCCTGTCGGTTTCCAAAGCGCAAACAGCCCCATCCGCCGAGTTAACAAA
GGCCTTCGGCGCCGACACGCCTGCAGATGAGATCCGGCAAGAAATTCTAC
GAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAGCGCAAGGAAATCATCGAG
CGCGTGGAGAAGGAGGTGTTGGATATCGTATCAGGACGGCTTGTTGATCC
TACGACGAAGCGAGTCTATACCCCCGGAATGATTTCCAAGGCCTTGGACC
AGCTCAGCTCGGCTAGTGGTCAACAGCAGTCGCAAACGTCTGGCAATGGG
GAGACTAATGGGGACGACAGCGAGGAGAGCCGCCCGAGGAAACCGCTCTG
GACGGGTGTGACGGCCAACAAGTCGGCGAAGAGTCAAGCGCTTGAAGCTA
TGAAGGCGCTTATTGCATGGCAACCTATCCCTGTGATGCGGGCGCGGATG
CGCCTCCGTGTCACCTGTCCTGTGTCACTGTTGAAGCAGAGTGTTAAGGG
TGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTAAAGAAAAGGAGGCGCCGT
CCAAGAGCGGCTCCAAGTCGAACAAGAAGGGTGGAAAGGGGTCCAAGAAA
GCCCGTCAGCAGGAATCCGAGGATGAGGCAGGTGGATCTGACGCAGAGTC
CGCACCTGCCAAGGGTCCGAGCAATGTCAAGGATAAGATCCTGAGCTATA
TCGAATCTATTGAGGCTCAGGAGGTTGTCGGCGGAGACGAGTGGGAGATC
ATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGGATTGAATGAATTTGTGGG
CAACGAGACCCGGGGCAGAGGACGTGTGGAGGTGCTGGATATGACGGTGA
CCCATGAAGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_011396KYF_011396Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011396-T1.exon1KYF_011396-T1.exon1Aspergillus niger KYF3exon
KYF_011396-T1.exon2KYF_011396-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011396-T1.cdsKYF_011396-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011396-T1KYF_011396-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926400M
DBxrefInterPro:IPR019783
DBxrefInterPro:IPR036786
DBxrefInterPro:IPR002140
DBxrefInterPro:IPR018978
DBxrefInterPro:IPR037188
DBxrefPFAM:PF09377
DBxrefPFAM:PF01172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4196097..4197289 +
Powered by Drupal