You are here

Home

KYF_011725-T1, KYF_011725-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011725-T1
Unique NameKYF_011725-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:5183249..5184786-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011725-T1 ID=KYF_011725-T1|Name=KYF_011725-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1538bp|location=Sequence derived from alignment at ch8:5183249..5184786- (Aspergillus niger KYF3)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTTTAGCGACTGTCAAGTCACATACAC
TAACAATATTAATTTAGATAACCTTGGTGCCATTCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCT
CGCGAGCAAGCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGATGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGCCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAGGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAAGTTTACGCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA
back to top

Coding sequence (CDS) from alignment at ch8:5183249..5184786-

>KYF_011725-T1 ID=KYF_011725-T1|Name=KYF_011725-T1|organism=Aspergillus niger KYF3|type=CDS|length=2958bp|location=Sequence derived from alignment at ch8:5183249..5184786- (Aspergillus niger KYF3)
ATAACCTTGGTGCCATTCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCC
CTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGA
GGCCTTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATG
CCTTCAACAAAGTCGGGTTAGACCACACCATCCTGGTCAAGATTGGCGCG
ACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAG
TGCTGTATCCCACGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCC
AGGCACCCAACACCGGTCCGCGCAAGGGATGGGCAGCGGGTGATGCTTGC
ATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGC
CAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCA
AGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAA
ACCGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGT
GGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACC
CAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATG
ACGATCATCAACAAGGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGA
CCACTGTCTGCGGTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGG
TCGAGACGGCCGACTACCAGGACGACAGCCCCTGGGCGACGGACCCGCGC
GTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAGGACCCCAAATACAC
AGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTG
TCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCA
CTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGC
AGAGCGGAATCTGGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCC
TGAAGACGGTGGCATCGGAGGAGTTTATGTCGCTACCAGCATGCCATTTT
GTGAACCTGTTCAGTTTGTAAATGACTGTCATTCCTGCCGCCGACGACAA
CTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGACTATGTCT
ACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCAAGGTCGCC
TTGATGGATGCTCTTGGAGCTGCCCTCGAGAGTATCCATACCAGTCCCCA
ATGCGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGCCACCTCGG
GTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATCCTCAAGGGA
GCCTTTGATCTGGGGGCCATGATCCGCTACCTCGACCACAATGATGCCTT
TCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGCCATTCTGG
CCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGAC
AGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGATCAAGGCGTATGA
GATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAG
ACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTG
CTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTATCCCACGCCTGGAT
GGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGC
GCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCA
CTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCC
CCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCC
CCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAAC
ACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGC
CAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAA
TCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGA
GCAACTTTGCATAACGCCGCAGATCGTGACCACTGTCTGCGGTACATGGT
CGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGG
ACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAG
ATCACCATGGCAGAGGACCCCAAATACACAGCCGATTATCATGATATGGC
GGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGA
CGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCG
GAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGAATCTGGGTCTTCG
ATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGG
AGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:00475472-methylcitrate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_011725KYF_011725Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011725-T1KYF_011725-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011725-T1.cdsKYF_011725-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011725-T1.exon2KYF_011725-T1.exon2Aspergillus niger KYF3exon
KYF_011725-T1.exon1KYF_011725-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8.12
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR012705
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:5183249..5184786 -
Powered by Drupal