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ATCC64974_1000-T1, ATCC64974_1000-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_1000-T1
Unique NameATCC64974_1000-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:337589..338454+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_1000-T1 ID=ATCC64974_1000-T1|Name=ATCC64974_1000-T1|organism=Aspergillus niger N402|type=mRNA|length=866bp|location=Sequence derived from alignment at OGUI01000001.1:337589..338454+ (Aspergillus niger N402)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGC
AGAGTTTGCTCGTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGAGTACGTACTTACTCTTTGCTCCAT
CTTGTGATTATTGATACAGTATACTAATCTGAGCTACCTTCTGCGACATG
CAGTGACGACGTTCTCCGAGCTGTCAAGAGTCTGGAACCGCTTGGCTCTG
GGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATTCGATCGATTCCC
AAAGAGCTAAACACGGACCAGGCTACTGTGCTCGAGGCAATTCAGGTTCT
TGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGAATTGGGAGAAGG
CTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGATGGCCTTGTCTGG
CTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACCTCAAAATCTGCT
AGATGACAGTGGGTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:337589..338454+

>ATCC64974_1000-T1 ID=ATCC64974_1000-T1|Name=ATCC64974_1000-T1|organism=Aspergillus niger N402|type=CDS|length=1578bp|location=Sequence derived from alignment at OGUI01000001.1:337589..338454+ (Aspergillus niger N402)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGC
AGAGTTTGCTCGTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGATGACGACGTTCTCCGAGCTGTCAA
GAGTCTGGAACCGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCA
AGCAATATATTCGATCGATTCCCAAAGAGCTAAACACGGACCAGGCTACT
GTGCTCGAGGCAATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCA
AGCGAATTTGAATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATC
TGCTGGCGGATGGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAG
TATTGGTCACCTCAAAATCTGCTAGATGACAGTGGGTGAATGGCTACTCG
TCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCAAGCCAGCCAGT
CATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATCTCTCCTCTTTA
CAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACCTTCGCGCTGGA
ACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGCAGAGTTTGCTC
GTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCAGCAATGTCAAA
GGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGTTTCTGGACGCA
GATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGTAGCTGTTAGAG
TGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCGGGTTAATCGGT
GTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCTATTGGTAGTGG
ACTGGAGGTTACAGATGACGACGTTCTCCGAGCTGTCAAGAGTCTGGAAC
CGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATT
CGATCGATTCCCAAAGAGCTAAACACGGACCAGGCTACTGTGCTCGAGGC
AATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGA
ATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGAT
GGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACC
TCAAAATCTGCTAGATGACAGTGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_1000ATCC64974_1000Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1000-T1.exon1ATCC64974_1000-T1.exon1Aspergillus niger N402exon
ATCC64974_1000-T1.exon2ATCC64974_1000-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1000-T1.cdsATCC64974_1000-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1000-T1ATCC64974_1000-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926477X
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016689
DBxrefInterPro:IPR040608
DBxrefInterPro:IPR036388
DBxrefPFAM:PF04157
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:337589..338454 +
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