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ATCC64974_100480-T1, ATCC64974_100480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_100480-T1
Unique NameATCC64974_100480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1478202..1479276+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_100480-T1 ID=ATCC64974_100480-T1|Name=ATCC64974_100480-T1|organism=Aspergillus niger N402|type=mRNA|length=1075bp|location=Sequence derived from alignment at OGUI01000017.1:1478202..1479276+ (Aspergillus niger N402)
ATGGGTGAGTATATTCTGTTCGCACTCTATCGCATGACCCCTCTACCACA
ATAACCTTCCTTGCACCCCACCCTCCTCACCATACTCACCTCACGCGTCC
ACGCATCCCCAACTAACCACCCCTCCAGACGGCGGCTACAACAACTACAG
CAGCACCTACAGCGGCGGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGCG
AGATGAACAACAGCCCATCCGGAGGAAAGGTACACTCACCAACCCCTCAC
CCCATCCCATCTATCCCATATCCCCCCCCCCCCCCCACTAACAAGAAATT
CATCATATAACAGTCCGACTACACCAACTCCACCCTCCGCCCCATAACCA
TCAAACAAGCTCTGGACGCAGTCCAGCCATACCCGGAAGCGCCCTACCAA
ATCGACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAA
CATCAGCTCGCAAAGCACAAACGTCACATACAAGATCGACGACGGCACAG
GCGAGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTCCATG
GACACGGACGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGG
TAAGGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGT
TTGGGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGT
CTGGATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTT
TTTCACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGG
GTGATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGAC
TACGGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGT
GTATCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGC
AGTTGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCG
GGAGATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACAGTGGATGAGCA
GACGTGGGCGATTTTGGAGTTTTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1478202..1479276+

>ATCC64974_100480-T1 ID=ATCC64974_100480-T1|Name=ATCC64974_100480-T1|organism=Aspergillus niger N402|type=CDS|length=2601bp|location=Sequence derived from alignment at OGUI01000017.1:1478202..1479276+ (Aspergillus niger N402)
ATGGACGGCGGCTACAACAACTACAGCAGCACCTACAGCGGCGGTGGTGG
CGGCGGCGGCGGCTTCATGCCGGGCGAGATGAACAACAGCCCATCCGGAG
GAAAGTCCGACTACACCAACTCCACCCTCCGCCCCATAACCATCAAACAA
GCTCTGGACGCAGTCCAGCCATACCCGGAAGCGCCCTACCAAATCGACTC
CGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAACATCAGCT
CGCAAAGCACAAACGTCACATACAAGATCGACGACGGCACAGGCGAGATC
GAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTCCATGGACACGGA
CGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGGTAAGGTAG
AGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGTTTGGGAAT
AAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGTCTGGATGA
GGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTTTTTCACGA
GGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGGGTGATGTG
GGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGACTACGGGGC
TGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGTGTATCAAT
TGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGCAGTTGATT
GCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCGGGAGATGA
GTTGCTCACTGCGGGTGTGATCTTTTCGACAGTGGATGAGCAGACGTGGG
CGATTTTGGAGTTTTAAATGGACGGCGGCTACAACAACTACAGCAGCACC
TACAGCGGCGGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGCGAGATGAA
CAACAGCCCATCCGGAGGAAAGTCCGACTACACCAACTCCACCCTCCGCC
CCATAACCATCAAACAAGCTCTGGACGCAGTCCAGCCATACCCGGAAGCG
CCCTACCAAATCGACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACA
AGTACGCAACATCAGCTCGCAAAGCACAAACGTCACATACAAGATCGACG
ACGGCACAGGCGAGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCC
GACTCCATGGACACGGACGACATCAACAATACTAAGGCCGCCACCGGCAG
GAGAGACGGTAAGGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGT
TGAAGTCGTTTGGGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCT
GTTAAGAGTCTGGATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGT
GCATTTGTTTTTCACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTG
GGGGAGTGGGTGATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACA
GGGGATGACTACGGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGC
GAAGAGAGTGTATCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGT
TGCATGCGCAGTTGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTG
GCCAGGGCGGGAGATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACAGT
GGATGAGCAGACGTGGGCGATTTTGGAGTTTTAAATGGACGGCGGCTACA
ACAACTACAGCAGCACCTACAGCGGCGGTGGTGGCGGCGGCGGCGGCTTC
ATGCCGGGCGAGATGAACAACAGCCCATCCGGAGGAAAGTCCGACTACAC
CAACTCCACCCTCCGCCCCATAACCATCAAACAAGCTCTGGACGCAGTCC
AGCCATACCCGGAAGCGCCCTACCAAATCGACTCCGCCGAAATCTCCAGC
ATCTGCTTCATCGGACAAGTACGCAACATCAGCTCGCAAAGCACAAACGT
CACATACAAGATCGACGACGGCACAGGCGAGATCGAAGCCAAGCAATGGA
TCGACTCCATGACGGCCGACTCCATGGACACGGACGACATCAACAATACT
AAGGCCGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTGAACGGGTACGC
GAAGGTGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAGGTTTGTGGGTG
CGCATTGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGCATTGTCATTTG
TTGGAGGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGGCCGCCTGGGGG
TGGTGCCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGCTAAGGGGGATG
CGGCAATGGGAGGTACAGGGGATGACTACGGGGCTGGAAAGAATCTGCCT
GCTATGAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTTAGGACGGAGCC
GCAGAGCAATGAGGGGTTGCATGCGCAGTTGATTGCGGCGAAGCTGAGTT
TGCCGATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGCTCACTGCGGGT
GTGATCTTTTCGACAGTGGATGAGCAGACGTGGGCGATTTTGGAGTTTTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006260DNA replication
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_100480ATCC64974_100480Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100480-T1.exon1ATCC64974_100480-T1.exon1Aspergillus niger N402exon
ATCC64974_100480-T1.exon2ATCC64974_100480-T1.exon2Aspergillus niger N402exon
ATCC64974_100480-T1.exon3ATCC64974_100480-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100480-T1.cdsATCC64974_100480-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100480-T1ATCC64974_100480-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR014892
DBxrefInterPro:IPR014646
DBxrefPFAM:PF08784
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1478202..1479276 +
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