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ATCC64974_100510-T1, ATCC64974_100510-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_100510-T1
Unique NameATCC64974_100510-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1483230..1484166-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_100510-T1 ID=ATCC64974_100510-T1|Name=ATCC64974_100510-T1|organism=Aspergillus niger N402|type=mRNA|length=937bp|location=Sequence derived from alignment at OGUI01000017.1:1483230..1484166- (Aspergillus niger N402)
ATGAGTGCCACCACTACCGTCACCGAGCCGCCGAGAATCACGGCTGAGAA
CGTCGCGACTCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGGGAGGTGC
TCCCCACTGCGACAAGCAATGCCTCCGCCCCCGGCGACGAGCTTGCCGGT
TATGATGAGGAACAGGTCCGCCTGATGGAAGAGGTGTGTATTGTGCTGGA
TGAAGATGACAAGCCCATTGGCAGTGCCAGCAAGAAGGCCTGTAAGTTTA
TCGATCGTCACCAAGCATGGAGAACCTAATCAATGCTGATGGCGCGACTC
CACAGGCCACTTGATGACCAACATTGATCGCGGCCTCCTCCACCGTGCTT
TCTCCGTATTCCTTTTCGACTCGAACAAGCGTCTGCTGCTTCAACAACGT
GCGACCGAGAAGATCACCTTCCCCGACATGTGGACGAACACCTGCTGCTC
CCATCCCCTGGGCATCCCTGGGGAGACGGGCTCGCAGCTCGATGCGGCCG
TGCTGGGTGTGAAGCGCGCGGCGCAGCGCAAGCTGGAACACGAGCTGGGT
ATCAAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGCAT
CCACTACAAGGCGCCCAGTGATGGCAAATGGGGAGAGCACGAGAGTATGT
CTATAATTTACCAGTGGATGAGCTGTTGGATAGGTGACTGACCGTATCTA
GTTGACTACATTCTGTTCATCCAGGCGGACGTCGATTTGAATGTCAACCC
CAACGAAGTGCGCGACACGCGGTATGTGTCGGCGGACGAGCTGAAGCAGA
TGTTCGAGCAACCGGGACTGAAGTTCACGCCGTGGTTCAAGCTGATCTGC
AATTCAATGCTGTTCGAGTGGTGGAGCCATCTGGGCTCGGCGTCGCTTGA
GGGATACAAGAACGAGCAGCAGATCCGGAGGATGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1483230..1484166-

>ATCC64974_100510-T1 ID=ATCC64974_100510-T1|Name=ATCC64974_100510-T1|organism=Aspergillus niger N402|type=CDS|length=2448bp|location=Sequence derived from alignment at OGUI01000017.1:1483230..1484166- (Aspergillus niger N402)
TTGACTACATTCTGTTCATCCAGGCGGACGTCGATTTGAATGTCAACCCC
AACGAAGTGCGCGACACGCGGTATGTGTCGGCGGACGAGCTGAAGCAGAT
GTTCGAGCAACCGGGACTGAAGTTCACGCCGTGGTTCAAGCTGATCTGCA
ATTCAATGCTGTTCGAGTGGTGGAGCCATCTGGGCTCGGCGTCGCTTGAG
GGATACAAGAACGAGCAGCAGATCCGGAGGATGTAAGCCACTTGATGACC
AACATTGATCGCGGCCTCCTCCACCGTGCTTTCTCCGTATTCCTTTTCGA
CTCGAACAAGCGTCTGCTGCTTCAACAACGTGCGACCGAGAAGATCACCT
TCCCCGACATGTGGACGAACACCTGCTGCTCCCATCCCCTGGGCATCCCT
GGGGAGACGGGCTCGCAGCTCGATGCGGCCGTGCTGGGTGTGAAGCGCGC
GGCGCAGCGCAAGCTGGAACACGAGCTGGGTATCAAACCGGAGCAGGTGC
CGCTGGACAAGTTTGAGTTCTTCACCCGCATCCACTACAAGGCGCCCAGT
GATGGCAAATGGGGAGAGCACGAGAATGAGTGCCACCACTACCGTCACCG
AGCCGCCGAGAATCACGGCTGAGAACGTCGCGACTCTCTTCCCCGAGGTT
GACACTTCTCTGGCGCGGGAGGTGCTCCCCACTGCGACAAGCAATGCCTC
CGCCCCCGGCGACGAGCTTGCCGGTTATGATGAGGAACAGGTCCGCCTGA
TGGAAGAGGTGTGTATTGTGCTGGATGAAGATGACAAGCCCATTGGCAGT
GCCAGCAAGAAGGCCTTTGACTACATTCTGTTCATCCAGGCGGACGTCGA
TTTGAATGTCAACCCCAACGAAGTGCGCGACACGCGGTATGTGTCGGCGG
ACGAGCTGAAGCAGATGTTCGAGCAACCGGGACTGAAGTTCACGCCGTGG
TTCAAGCTGATCTGCAATTCAATGCTGTTCGAGTGGTGGAGCCATCTGGG
CTCGGCGTCGCTTGAGGGATACAAGAACGAGCAGCAGATCCGGAGGATGT
AAGCCACTTGATGACCAACATTGATCGCGGCCTCCTCCACCGTGCTTTCT
CCGTATTCCTTTTCGACTCGAACAAGCGTCTGCTGCTTCAACAACGTGCG
ACCGAGAAGATCACCTTCCCCGACATGTGGACGAACACCTGCTGCTCCCA
TCCCCTGGGCATCCCTGGGGAGACGGGCTCGCAGCTCGATGCGGCCGTGC
TGGGTGTGAAGCGCGCGGCGCAGCGCAAGCTGGAACACGAGCTGGGTATC
AAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGCATCCA
CTACAAGGCGCCCAGTGATGGCAAATGGGGAGAGCACGAGAATGAGTGCC
ACCACTACCGTCACCGAGCCGCCGAGAATCACGGCTGAGAACGTCGCGAC
TCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGGGAGGTGCTCCCCACTG
CGACAAGCAATGCCTCCGCCCCCGGCGACGAGCTTGCCGGTTATGATGAG
GAACAGGTCCGCCTGATGGAAGAGGTGTGTATTGTGCTGGATGAAGATGA
CAAGCCCATTGGCAGTGCCAGCAAGAAGGCCTTTGACTACATTCTGTTCA
TCCAGGCGGACGTCGATTTGAATGTCAACCCCAACGAAGTGCGCGACACG
CGGTATGTGTCGGCGGACGAGCTGAAGCAGATGTTCGAGCAACCGGGACT
GAAGTTCACGCCGTGGTTCAAGCTGATCTGCAATTCAATGCTGTTCGAGT
GGTGGAGCCATCTGGGCTCGGCGTCGCTTGAGGGATACAAGAACGAGCAG
CAGATCCGGAGGATGTAAGCCACTTGATGACCAACATTGATCGCGGCCTC
CTCCACCGTGCTTTCTCCGTATTCCTTTTCGACTCGAACAAGCGTCTGCT
GCTTCAACAACGTGCGACCGAGAAGATCACCTTCCCCGACATGTGGACGA
ACACCTGCTGCTCCCATCCCCTGGGCATCCCTGGGGAGACGGGCTCGCAG
CTCGATGCGGCCGTGCTGGGTGTGAAGCGCGCGGCGCAGCGCAAGCTGGA
ACACGAGCTGGGTATCAAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGT
TCTTCACCCGCATCCACTACAAGGCGCCCAGTGATGGCAAATGGGGAGAG
CACGAGAATGAGTGCCACCACTACCGTCACCGAGCCGCCGAGAATCACGG
CTGAGAACGTCGCGACTCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGG
GAGGTGCTCCCCACTGCGACAAGCAATGCCTCCGCCCCCGGCGACGAGCT
TGCCGGTTATGATGAGGAACAGGTCCGCCTGATGGAAGAGGTGTGTATTG
TGCTGGATGAAGATGACAAGCCCATTGGCAGTGCCAGCAAGAAGGCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004452isopentenyl-diphosphate delta-isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDI1ATCC64974_100510Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100510-T1ATCC64974_100510-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100510-T1.cdsATCC64974_100510-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100510-T1.exon3ATCC64974_100510-T1.exon3Aspergillus niger N402exon
ATCC64974_100510-T1.exon2ATCC64974_100510-T1.exon2Aspergillus niger N402exon
ATCC64974_100510-T1.exon1ATCC64974_100510-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926458I
DBxrefInterPro:IPR015797
DBxrefInterPro:IPR000086
DBxrefInterPro:IPR011876
DBxrefPFAM:PF00293
Productisopentenyl-diphosphate delta-isomerase idi1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1483230..1484166 -
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