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ATCC64974_100860-T1, ATCC64974_100860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_100860-T1
Unique NameATCC64974_100860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1593851..1594594+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_100860-T1 ID=ATCC64974_100860-T1|Name=ATCC64974_100860-T1|organism=Aspergillus niger N402|type=mRNA|length=744bp|location=Sequence derived from alignment at OGUI01000017.1:1593851..1594594+ (Aspergillus niger N402)
ATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTAAGTCATACCCCG
CGTTCCCCCGGAATGCCCCATCTCCATGCATGAAATACACCCCCTAACGC
AGGAACAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCGT
AAGTGCACCCCTACTTGGATGGAATCGAATGACGGCTAATATTTTTGCTT
TATGATAGGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGTTCGTTATATG
CCCCGGACCACTACTATCTACTACTACGGCACCCCGCCGCGGAACGACAT
AATAATGTATGCTGGATAGGTACATCGCCTGGTCGCCCCGCGAGATCAGA
AATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTAC
CGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAA
CGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATC
AGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAA
GTGAGTGATGCTAGAGGCTGGTGGAGTGGTGCCACCGGAATTGTTTGGAA
TGGGAAAATAGGTAGCAGACGGATGAGCTGATGGTTGTGCAGGTATACGC
TATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGC
AGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1593851..1594594+

>ATCC64974_100860-T1 ID=ATCC64974_100860-T1|Name=ATCC64974_100860-T1|organism=Aspergillus niger N402|type=CDS|length=2190bp|location=Sequence derived from alignment at OGUI01000017.1:1593851..1594594+ (Aspergillus niger N402)
ATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGGGGAAGACGCGGCT
CGCGAAATGGTATGCGCCGTATAGCGATGAAGAAAAAGTCAAGCTAAAGG
GCGAGGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAAT
TTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGG
GTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACC
TCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAAC
GTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGTATACGCTATTCT
GGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCG
TGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAATGGTTCTCTCA
TTCATTCTTGTGCAGAATCGCCAGGGGAAGACGCGGCTCGCGAAATGGTA
TGCGCCGTATAGCGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGTACATC
GCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTC
AAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTG
CGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCC
ACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTG
GACTTGGTGTTCAATTTCTACAAAGTATACGCTATTCTGGACGAGGTGTT
CCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGT
TGGAACACTTGGATAAGCTGGAATGAATGGTTCTCTCATTCATTCTTGTG
CAGAATCGCCAGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAG
CGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGTACATCGCCTGGTCGCCC
CGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACC
AAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGA
CGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCG
AGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTC
AATTTCTACAAAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGA
GATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGG
ATAAGCTGGAATGAATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAG
GGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCGATGAAGAAAA
AGTCAAGCTAAAGGGCGAGGTACATCGCCTGGTCGCCCCGCGAGATCAGA
AATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTAC
CGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAA
CGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATC
AGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAA
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGGGGAAGACGCGG
CTCGCGAAATGGTATGCGCCGTATAGCGATGAAGAAAAAGTCAAGCTAAA
GGGCGAGGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCA
ATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCG
GGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTA
CCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAA
ACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGTATACGCTATT
CTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGT
CGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
APS2ATCC64974_100860Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100860-T1ATCC64974_100860-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100860-T1.exon1ATCC64974_100860-T1.exon1Aspergillus niger N402exon
ATCC64974_100860-T1.exon2ATCC64974_100860-T1.exon2Aspergillus niger N402exon
ATCC64974_100860-T1.exon3ATCC64974_100860-T1.exon3Aspergillus niger N402exon
ATCC64974_100860-T1.exon4ATCC64974_100860-T1.exon4Aspergillus niger N402exon
ATCC64974_100860-T1.exon5ATCC64974_100860-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_100860-T1.cdsATCC64974_100860-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR022775
DBxrefInterPro:IPR016635
DBxrefPFAM:PF01217
ProductAP-2 complex subunit sigma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1593851..1594594 +
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