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ATCC64974_1010-T1, ATCC64974_1010-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_1010-T1
Unique NameATCC64974_1010-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:339110..341796-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_1010-T1 ID=ATCC64974_1010-T1|Name=ATCC64974_1010-T1|organism=Aspergillus niger N402|type=mRNA|length=2687bp|location=Sequence derived from alignment at OGUI01000001.1:339110..341796- (Aspergillus niger N402)
ATGTCGCGTTTCTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTC
TGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGG
AGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAG
GACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTC
CGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTG
CCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTGATTGAA
AATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGGTGCGTTTGG
CCCTGGAATCAAAGAATGGAATTGCGGGACCGGCAGCGGAGGGAAGGATG
GGTTTTTGATACTAACATCCGTTTTATAGAGTTTGACAAGCTGAACCGTC
AAATCGTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGATCTACGTCAAG
ACCGTTGCGGACCTGGAGGATTTCGTCAACGAGACCATCTCGAAGCAGAA
GTCGAGCAACAAGAAGATGAACGCCAGCAACGCCAAGGGATTCAACGCCG
TTAAGCAGCGTATCAAGAAGAACAACAAGGACTACGCCGTTCAGATCGAC
AAGTACAGGAAGGACAAGGATGGCTTCATGGAAGCCAAGGAGGAAGTGGC
CCGTCCCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGAGCGTATCGAAG
CCCCTGCTCTTTCCACCGCCGGTGATGACGATGGTTTCGCGACCGTTGGC
CGTGGCGGCAAGACCCTCCAGTACACCCCCGAGAGCATCCTGAAGCACCT
CCGCGTTATCGTCGAATCCCGCGGAAAGAAGAACACCGACCGTTTGGAGC
AGATCCGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGACTCCTTACCAG
CGTATCCGCATCTACTTGACCATGATCTCCACCCGCTTCGATCTCACCTC
TTCCTCTACCAGCAACTACATGGCCGTCGATCAGTGGAAGTTCGCCGAGC
AGGAGTTCGCTACCCTTCTGTCCGTTCTCGAGAACAACCGCACCTATGTC
GTGACTGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAGCAGCCCACACC
CGCCCCCGGCGAGGTCGTTCACATCCCCGGCAGCATTGTCTCGTATGTCG
AGAGACTGGATGATGAGCTCACCCGTTCCCTGCAGCACATTGACCCCCAC
ACTGCCGAGTACATCGACCGTCTGGGTGATGAGAAGCAGCTGTACGCCAA
CCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTACTCAGTCCGAGAAGA
CCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTCATGAGGAGACTGGAG
CACATCTACTTCAAGCCCTCTCAGGTCGTCACGATCCTGGAGGAAGGTAC
CTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACGTCACTCCCCGTGGCA
ACACGGGAGATGTGACCAACCTTGTGCAGACCCTTTGCAGCTACCTGTTC
AAGCACAGCGACGGTATCATCCGTGCTCGTGCGATGCTGTGCCAGATCTA
CTTCCTTGCTCTGCACGACCAGTACTACCGCTCTCGTGACCTGATGCTCA
TGTCCCACCTTACCGAGAACATCGCCAACTTCGACGTTTCCACCCAGATC
CTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTGTGCCTTCCGGGCCGG
CCTGATCTACGAGGCTCAGACCACCCTCTCTGAGGTCTGCGGCAGTGGAC
GTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGCGCTACTCCACC
GTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAGCTGCCCTTCCA
CATGCACATCAACCTGGAGCTTCTCGAGTGCATCTACCTGACGTCGAGCA
TGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCTCCCCCGAGATG
AAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTATGCTGGACTACAACGA
GCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCCGTGACGGTGTCATCA
TGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGGCCGCTGAGATG
CTCAACTCGATCAAGATCTGGGATCTGATGCCCCAGCCCGACAAGGTCAA
GGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCGCACCTACCTCT
TCACCTACGCCCCCTTCTACGACAGCCTCTCCATCTCCACCCTGGCTACC
ATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTATCATCAGCCGTATGAT
CTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGGTCAACGATGCCATTG
TCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCCAGATCGTCACC
CTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAACGAAAAGACTCTCGA
GCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGCGCGATCAGGGCGCCG
GCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAGCCCGTGGTGGT
CCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGTGGACAGCAGTT
TAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCATAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:339110..341796-

>ATCC64974_1010-T1 ID=ATCC64974_1010-T1|Name=ATCC64974_1010-T1|organism=Aspergillus niger N402|type=CDS|length=5196bp|location=Sequence derived from alignment at OGUI01000001.1:339110..341796- (Aspergillus niger N402)
AGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCG
ACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAA
CGAGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCA
ACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAG
GACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCAT
GGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGA
CCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGAC
GATGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCC
CGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGA
AGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAG
GTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTC
CACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCG
ATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTC
GAGAACAACCGCACCTATGTCGTGACTGAGGGTGCCGAAGAGTGGGAGGA
TGATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCG
GCAGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCC
CTGCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGA
TGAGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGG
GTCTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGC
GTGGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGT
CACGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAAT
CCAACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAG
ACCCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCG
TGCGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACC
GCTCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAAC
TTCGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGG
TCTGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCT
CTGAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATC
ATCCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCG
TCAGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGT
GCATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAG
ACTTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCG
TCGTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGA
ACACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGAC
TGGAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGAT
GCCCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGG
AGGGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTC
TCCATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGC
CGCTATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCG
ACCAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGT
CTCCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGA
GTCCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCT
TCCAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGT
GGTGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCG
TCGGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCA
AGGCATAAATGTCGCGTTTCTTCTACGGTGGCGGTAGCGACAGCGAGTCC
AGCTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCA
GTCCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCT
CTTCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAG
AATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGT
CAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGT
TGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGAG
TTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGAC
CCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACG
AGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAAC
GCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGA
CTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGG
AAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACC
AAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGA
TGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCG
AGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAG
AACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGT
TGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCA
CCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCGAT
CAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGA
GAACAACCGCACCTATGTCGTGACTGAGGGTGCCGAAGAGTGGGAGGATG
ATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCGGC
AGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCT
GCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATG
AGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGT
CTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGT
GGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCA
CGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCC
AACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGAC
CCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTG
CGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGC
TCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTT
CGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTC
TGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCT
GAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCAT
CCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTC
AGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGC
ATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGAC
TTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTC
GTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAAC
ACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTG
GAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGC
CCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAG
GGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTC
CATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCG
CTATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGAC
CAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCT
CCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGT
CCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTC
CAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGG
TGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTC
GGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAG
GCATAAATGTCGCGTTTCTTCTACGGTGGCGGTAGCGACAGCGAGTCCAG
CTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGT
CCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCT
TCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAA
TGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCA
AGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTG
ATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
GO:0031369translation initiation factor binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NIP1ATCC64974_1010Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1010-T1ATCC64974_1010-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1010-T1.cdsATCC64974_1010-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_1010-T1.exon2ATCC64974_1010-T1.exon2Aspergillus niger N402exon
ATCC64974_1010-T1.exon1ATCC64974_1010-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092616QN
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR027516
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR008905
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
ProductTranslation initiation factor 3 subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:339110..341796 -
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