|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:1642049..1643054- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_101000-T1 ID=ATCC64974_101000-T1|Name=ATCC64974_101000-T1|organism=Aspergillus niger N402|type=mRNA|length=1006bp|location=Sequence derived from alignment at OGUI01000017.1:1642049..1643054- (Aspergillus niger N402)
ATGAACAACCACGCCCTCCTCATCCGCCGAATACAACCACTCCGGTCCCT
GCGACGTCAACCACCACGAAGACACCTCTCCTCCACCCCCCGCAACGCTG
AACCTCACCATAACCCCGTCCCTGAGAAACATCACACTCCCTCGAACAAC
CCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGCATCGACCACCGCCGC
CCCCGGGTCGGTATCCGCATCGCGAGCACTCATCCAGAGAATCCAGGCCG
GTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGCGTGCAGGAGAGACGA
CCCTACCGGACACAAGTGATCAGTACGATTGTGGTGTATCTGTGTGGTGA
TTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATGGTTCACCCCAGGATG
TGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAATAATGCCGGAGGAATT
GGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCATTTAACAGTAGGAGT
GGGGAGTGCAATCCCGACGTATAAATGGTGAGTGTCGCAGTGTATGGTGG
GGATGTCTATGTGATGATGGCTAATACGAAGGGAGATTTAGGTTCATGTT
CCTGCACAACAACTTCAACTTCTCGTCCAAGTTCCTCTCTATCCTTACCA
AGGTCTGCGTGCAACAGGCGGTGTTCACTCCCGTGTTCAATACCTATTTC
TTTGGTCTGCAGTCGTTGATGACGGGCAAGTCGTTGGAGGAGACTTTTGA
ACGGCTCAAGGTCGCTTTGCCGACGAGTATCTCGAACAGCGTGAAGCTGT
GGCCGGCTGTCACGGCTTTCAGCTTCATGTATGTGGCGCCTCAATTCCGG
AGTATCTTTTCCGGAGTCATTGCTGTTGGGTGGCAGACGTATCTGAGCTG
GTTGAATCAGAAGGCGGCGCGCAAGGTCGAGGCGGAAAGATTGGCGTCGG
TGGAGGTGGGTGCTGGTGCTGATGCTGGGGTTGGTGCGGTCGCTATGAAG
GCATAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:1642049..1643054- >ATCC64974_101000-T1 ID=ATCC64974_101000-T1|Name=ATCC64974_101000-T1|organism=Aspergillus niger N402|type=CDS|length=1884bp|location=Sequence derived from alignment at OGUI01000017.1:1642049..1643054- (Aspergillus niger N402)
GTTCATGTTCCTGCACAACAACTTCAACTTCTCGTCCAAGTTCCTCTCTA
TCCTTACCAAGGTCTGCGTGCAACAGGCGGTGTTCACTCCCGTGTTCAAT
ACCTATTTCTTTGGTCTGCAGTCGTTGATGACGGGCAAGTCGTTGGAGGA
GACTTTTGAACGGCTCAAGGTCGCTTTGCCGACGAGTATCTCGAACAGCG
TGAAGCTGTGGCCGGCTGTCACGGCTTTCAGCTTCATGTATGTGGCGCCT
CAATTCCGGAGTATCTTTTCCGGAGTCATTGCTGTTGGGTGGCAGACGTA
TCTGAGCTGGTTGAATCAGAAGGCGGCGCGCAAGGTCGAGGCGGAAAGAT
TGGCGTCGGTGGAGGTGGGTGCTGGTGCTGATGCTGGGGTTGGTGCGGTC
GCTATGAAGGCATAAATGAACAACCACGCCCTCCTCATCCGCCGAATACA
ACCACTCCGGTCCCTGCGACGTCAACCACCACGAAGACACCTCTCCTCCA
CCCCCCGCAACGCTGAACCTCACCATAACCCCGTCCCTGAGAAACATCAC
ACTCCCTCGAACAACCCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGC
ATCGACCACCGCCGCCCCCGGGTCGGTATCCGCATCGCGAGCACTCATCC
AGAGAATCCAGGCCGGTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGC
GTGCAGGAGAGACGACCCTACCGGACACAAGTGATCAGTACGATTGTGGT
GTATCTGTGTGGTGATTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATG
GTTCACCCCAGGATGTGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAAT
AATGCCGGAGGAATTGGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCA
TTTAACAGTAGGAGTGGGGAGTGCAATCCCGACGTATAAATGGTTCATGT
TCCTGCACAACAACTTCAACTTCTCGTCCAAGTTCCTCTCTATCCTTACC
AAGGTCTGCGTGCAACAGGCGGTGTTCACTCCCGTGTTCAATACCTATTT
CTTTGGTCTGCAGTCGTTGATGACGGGCAAGTCGTTGGAGGAGACTTTTG
AACGGCTCAAGGTCGCTTTGCCGACGAGTATCTCGAACAGCGTGAAGCTG
TGGCCGGCTGTCACGGCTTTCAGCTTCATGTATGTGGCGCCTCAATTCCG
GAGTATCTTTTCCGGAGTCATTGCTGTTGGGTGGCAGACGTATCTGAGCT
GGTTGAATCAGAAGGCGGCGCGCAAGGTCGAGGCGGAAAGATTGGCGTCG
GTGGAGGTGGGTGCTGGTGCTGATGCTGGGGTTGGTGCGGTCGCTATGAA
GGCATAAATGAACAACCACGCCCTCCTCATCCGCCGAATACAACCACTCC
GGTCCCTGCGACGTCAACCACCACGAAGACACCTCTCCTCCACCCCCCGC
AACGCTGAACCTCACCATAACCCCGTCCCTGAGAAACATCACACTCCCTC
GAACAACCCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGCATCGACCA
CCGCCGCCCCCGGGTCGGTATCCGCATCGCGAGCACTCATCCAGAGAATC
CAGGCCGGTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGCGTGCAGGA
GAGACGACCCTACCGGACACAAGTGATCAGTACGATTGTGGTGTATCTGT
GTGGTGATTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATGGTTCACCC
CAGGATGTGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAATAATGCCGG
AGGAATTGGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCATTTAACAG
TAGGAGTGGGGAGTGCAATCCCGACGTATAAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_101000-T1 | ATCC64974_101000-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007248 |
| DBxref | PFAM:PF04117 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:1642049..1643054 - |
|
