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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:1651231..1651819- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_101020-T1 ID=ATCC64974_101020-T1|Name=ATCC64974_101020-T1|organism=Aspergillus niger N402|type=mRNA|length=589bp|location=Sequence derived from alignment at OGUI01000017.1:1651231..1651819- (Aspergillus niger N402)
ATGGCCCGCACTAAGCAGACTGCCCGTAAGTGCAACCTCACTGTCCTTTC
CCCTCGTGTCGTTCGACCGCGTCATGGTCGCGACACCCGTGTCTCACATG
AGGAACATCATCACTAACTATCATCTCAATATAGGTAAGTCCACTGGTGG
CAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGCTC
CCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGGTATGTAT
ACACTCATCATTCAAAGTGGCAAATGGCCTATCCGAACAGTCAACTAACA
GTCTACCAAAGGTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGA
GCACTGAGCTCCTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAA
ATTGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGG
TGCTCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACA
CCAACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGAC
ATCCAGCTTGCCCGCCGTCTCCGTGGTGAGCGCTCTTAG back to topCoding sequence (CDS) from alignment at OGUI01000017.1:1651231..1651819- >ATCC64974_101020-T1 ID=ATCC64974_101020-T1|Name=ATCC64974_101020-T1|organism=Aspergillus niger N402|type=CDS|length=1233bp|location=Sequence derived from alignment at OGUI01000017.1:1651231..1651819- (Aspergillus niger N402)
GTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGAGCACTGAGCTC
CTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAAATTGCTCAGGA
CTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGGTGCTCTTCAGG
AGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACACCAACCTGTGC
GCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAGCTTGC
CCGCCGTCTCCGTGGTGAGCGCTCTTAGGTAAGTCCACTGGTGGCAAGGC
TCCCCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGCCGCTCCCTCCA
CCGGAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGATGGCCCGCACTAA
GCAGACTGCCCGTACCGTCGCTCTGCGTGAAATCCGTCGTTACCAGAAGA
GCACTGAGCTCCTGATCCGCAAGCTGCCCTTCCAGCGTCTTGTCCGTGAA
ATTGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCCTCCGCCATCGG
TGCTCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCCCTCTTCGAGGACA
CCAACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGAC
ATCCAGCTTGCCCGCCGTCTCCGTGGTGAGCGCTCTTAGGTAAGTCCACT
GGTGGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCTGCCCGTAAGGC
CGCTCCCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTACAAGCCCGATG
GCCCGCACTAAGCAGACTGCCCGTACCGTCGCTCTGCGTGAAATCCGTCG
TTACCAGAAGAGCACTGAGCTCCTGATCCGCAAGCTGCCCTTCCAGCGTC
TTGTCCGTGAAATTGCTCAGGACTTCAAGTCGGATCTCCGCTTCCAGTCC
TCCGCCATCGGTGCTCTTCAGGAGTCCGTCGAGGCCTACCTCGTCTCCCT
CTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCC
AGTCCAAGGACATCCAGCTTGCCCGCCGTCTCCGTGGTGAGCGCTCTTAG
GTAAGTCCACTGGTGGCAAGGCTCCCCGTAAGCAGCTCGCCTCCAAGGCT
GCCCGTAAGGCCGCTCCCTCCACCGGAGGTGTCAAGAAGCCTCACCGTTA
CAAGCCCGATGGCCCGCACTAAGCAGACTGCCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_101020-T1 | ATCC64974_101020-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR000164 |
| DBxref | PFAM:PF00125 |
| Product | histone H3.1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:1651231..1651819 - |
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