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ATCC64974_101030-T1, ATCC64974_101030-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_101030-T1
Unique NameATCC64974_101030-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1652648..1653121+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_101030-T1 ID=ATCC64974_101030-T1|Name=ATCC64974_101030-T1|organism=Aspergillus niger N402|type=mRNA|length=474bp|location=Sequence derived from alignment at OGUI01000017.1:1652648..1653121+ (Aspergillus niger N402)
ATGACTGGCCGTAAGTTCATCACTTCCCATCATGGGCTATCTATCATCTC
GATAGATTGTCCACTGCCGTCTACTCCATGATCAACAGTGACTGACTTGA
CGCGTCTCAACAGGTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGC
CAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAGGGTATCACTAAGC
CCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCC
ATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGT
CATCCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCA
CCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGGCCGTAAGTACCAC
ACGTTTTGGCTTTTGTGTGTCCAACGCGTCTAACATGGAATTCCTCAGGT
ACCCTCTACGGTTTCGGTGGTTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1652648..1653121+

>ATCC64974_101030-T1 ID=ATCC64974_101030-T1|Name=ATCC64974_101030-T1|organism=Aspergillus niger N402|type=CDS|length=936bp|location=Sequence derived from alignment at OGUI01000017.1:1652648..1653121+ (Aspergillus niger N402)
ATGACTGGCCGTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGCCAA
GCGTCACCGCAAGATCTTGCGTGACAACATCCAGGGTATCACTAAGCCCG
CTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATG
ATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCAT
CCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCT
CCCTCGACGTCGTCTATGCTCTTAAGAGACAGGGCCGTACCCTCTACGGT
TTCGGTGGTTAAATGACTGGCCGTGGAAAGGGTGGAAAGGGTCTCGGCAA
GGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAGGGTA
TCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGT
ATCTCTGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTTCCT
TGAGGGTGTCATCCGTGACGCTGTCACCTACACTGAGCACGCCAAGCGCA
AGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGGCCGT
ACCCTCTACGGTTTCGGTGGTTAAATGACTGGCCGTGGAAAGGGTGGAAA
GGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGTGACA
ACATCCAGGGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCGTGGT
GGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTGTCCT
CAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTGAGC
ACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAG
AGACAGGGCCGTACCCTCTACGGTTTCGGTGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_101030ATCC64974_101030Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101030-T1.exon1ATCC64974_101030-T1.exon1Aspergillus niger N402exon
ATCC64974_101030-T1.exon2ATCC64974_101030-T1.exon2Aspergillus niger N402exon
ATCC64974_101030-T1.exon3ATCC64974_101030-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101030-T1.cdsATCC64974_101030-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101030-T1ATCC64974_101030-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019809
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR035425
DBxrefInterPro:IPR004823
DBxrefInterPro:IPR001951
DBxrefPFAM:PF02969
DBxrefPFAM:PF15511
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1652648..1653121 +
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