You are here

Home

ATCC64974_10130-T1, ATCC64974_10130-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_10130-T1
Unique NameATCC64974_10130-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:830764..832331-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_10130-T1 ID=ATCC64974_10130-T1|Name=ATCC64974_10130-T1|organism=Aspergillus niger N402|type=mRNA|length=1568bp|location=Sequence derived from alignment at OGUI01000002.1:830764..832331- (Aspergillus niger N402)
ATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCAC
CTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAG
CCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCG
CGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGA
TTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGC
GAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGC
AACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTT
GGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCT
TGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGC
TTCTTGGATGGGGCTACTCCCACGGCTCTATGTAAGTGTCGCTCTTGTGC
CTGTTACTATATAGCTGTGTGATGTTGATTGAAACAGTCGCGGATAGTGG
CTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCAACCCGC
CGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTGAGCAGT
GTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAAGCATAT
TTCGAGAGGTTTTATTCAGGATACACCATTCATCACACCCACGACCTTGG
ATAATAAGATTGGCATCATGGATGCTCCGTCGGAGGCAAAATATTTGAAA
GAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAATTTCCC
GACCAGACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTAAGATGA
CAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATGCCCGTA
TCAGCCGTGCTAGCACCACACGCATATCAATTTCAGTGTCATGAGTACAC
GATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGGGACCGT
ATATGTCGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTGAATGTA
TCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAAGGATAT
ACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATTTAGAGG
CCATAACGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTACAACGGG
TACCATGAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGGAAATAT
GGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAATTGATG
CGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGACAAATTC
TTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTTGTCGAC
GGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCATATCAT
TGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAGATGAAG
AGGATGACCAGGGTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:830764..832331-

>ATCC64974_10130-T1 ID=ATCC64974_10130-T1|Name=ATCC64974_10130-T1|organism=Aspergillus niger N402|type=CDS|length=3024bp|location=Sequence derived from alignment at OGUI01000002.1:830764..832331- (Aspergillus niger N402)
TCGCGGATAGTGGCTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTC
ATTGCCAACCCGCCGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTC
AATTGTGAGCAGTGTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAG
ACCCGAAGCATATTTCGAGAGGTTTTATTCAGGATACACCATTCATCACA
CCCACGACCTTGGATAATAAGATTGGCATCATGGATGCTCCGTCGGAGGC
AAAATATTTGAAAGAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCA
TGGATAATTTCCCGACCAGACAGACAGCCACTGAGACAAATGCATTTGCT
CAAGCTAAGATGACAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGA
GATGATGCCCGTATCAGCCGTGCTAGCACCACACGCATATCAATTTCAGT
GTCATGAGTACACGATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATA
CGAATGGGACCGTATATGTCGATTGACCATATTCTTCATTGTCAGCGTAT
GCTGCTGAATGTATCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCA
CGAAAAAGGATATACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATG
ACTAATTTAGAGGCCATAACGACCGGGGAGGCCGGGCATACGCAGAGACT
CCTGTACAACGGGTACCATGAGCATATGCTGCCGGACTGCAAGCAAGATG
TTCCAGGAAATATGGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGG
AGTCAAATTGATGCGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTC
TGGTGACAAATTCTTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAG
ATCTGTTGTCGACGGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCG
GCTCGCATATCATTGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCAT
GCTGCAGATGAAGAGGATGACCAGGGTGTAGATGAATGACCATCCCCACC
CCCTTCCCAAAAGCGTCAAAGTCCGCTCCACCTGCAATGCCTGCCAACAA
GCCAAGATCCGCTGCAGTCATGAGAAGCCAGCCTGTCGACGGTGTCAGAA
GCACAACATCGACTGTGTCTACAGTATATCGCGACGCTTAGGGCGACCAG
CGAAGAAGAAAGATGCCGACGATGAGAGCGATTATCGTCGAGATCGTGAG
TTTCTAGACGGGCCTAGGAAGCAAGACTCGCGAGCGCGGAATTGTTCCAG
GAACAGTCACGGCAATAATAACAGCAGCAGCAACAGCAGAAAGAGAAGGA
TGAAGCTGGAGGATGAGCAAGAGACAGTGTTGGATGATACTCTCCTGCTC
TTGGACAAGGCAGGTGGGAGTCAGAGTGTCTTGGATCCTGTTGGTGCGAT
AGATCCGGTATCTAGTTTACCGGGTGATTGCTTCTTGGATGGGGCTACTC
CCACGGCTCTATTCGCGGATAGTGGCTTCGACTTATTCTCCGATAGCTGG
GTGCAAGAGTTCATTGCCAACCCGCCGGTCGATCTCGCGCCGGAAGGTTT
ACTCCTGGATTCAATTGTGAGCAGTGTCAAGCCTGAAAGTACTGGCGGTC
GTACTCCAGTAGACCCGAAGCATATTTCGAGAGGTTTTATTCAGGATACA
CCATTCATCACACCCACGACCTTGGATAATAAGATTGGCATCATGGATGC
TCCGTCGGAGGCAAAATATTTGAAAGAGGATCCGCTGGCTTGGTCGTTGC
CGTTCTCGGCCATGGATAATTTCCCGACCAGACAGACAGCCACTGAGACA
AATGCATTTGCTCAAGCTAAGATGACAAAGAGGCCATACCTGTATGGCCT
CCCTGCGGGTGAGATGATGCCCGTATCAGCCGTGCTAGCACCACACGCAT
ATCAATTTCAGTGTCATGAGTACACGATCCAGGAATCGTTCAGGCAGATG
TCGATCGCGATACGAATGGGACCGTATATGTCGATTGACCATATTCTTCA
TTGTCAGCGTATGCTGCTGAATGTATCCGACACAATTCTCAAATGTTGCG
TCTGCTGCATCACGAAAAAGGATATACTCATGGTCGTCGTTGTTAATATC
GACAGTCTAATGACTAATTTAGAGGCCATAACGACCGGGGAGGCCGGGCA
TACGCAGAGACTCCTGTACAACGGGTACCATGAGCATATGCTGCCGGACT
GCAAGCAAGATGTTCCAGGAAATATGGCAAGACGGTATCGGAGTGGTGGA
CTGCATTTCAGGAGTCAAATTGATGCGTGTCCATTGGTTGTCGGCAAGTT
CTGCGTCCAGTCTGGTGACAAATTCTTTTGTATCCTGCAGATCTTGTACA
GCCAGTTATCAGATCTGTTGTCGACGGTCAAAAGAATAAATCTCTATACG
CAGGAGTCATCGGCTCGCATATCATTGACTAGAGAGACTGAGAGGAGATT
AGAGGAGGTCATGCTGCAGATGAAGAGGATGACCAGGGTGTAGATGAATG
ACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCACCTGCAAT
GCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAGCCTGTCG
ACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCGCGACGCT
TAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGATTATCGT
CGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGCGAGCGCG
GAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGCAACAGCA
GAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTTGGATGAT
ACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCTTGGATCC
TGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGCTTCTTGG
ATGGGGCTACTCCCACGGCTCTAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_10130ATCC64974_10130Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10130-T1ATCC64974_10130-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10130-T1.cdsATCC64974_10130-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10130-T1.exon2ATCC64974_10130-T1.exon2Aspergillus niger N402exon
ATCC64974_10130-T1.exon1ATCC64974_10130-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:830764..832331 -
Powered by Drupal