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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:1880612..1883889+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_101730-T1 ID=ATCC64974_101730-T1|Name=ATCC64974_101730-T1|organism=Aspergillus niger N402|type=mRNA|length=3278bp|location=Sequence derived from alignment at OGUI01000017.1:1880612..1883889+ (Aspergillus niger N402)
ATGGCGGCACTTGGCGATGATAGGATTCCGCCGGAGATGGACGACGCAGC
TTCCCAGTTCCGCCCGCGGAGACATGACGATGACGATGATGCTTCCGGAG
ACGACGATGTAGAGAGCACAACTAGTGCTCAGGCAGCCGACAACAAGAAT
CATCAGGGGCATTTTGAGGAGGAGAAAGAACTCCCGCCACATGCATGCGC
GTGAGTATATCGTGGCGTTTGCTCTGTTACATCTTGACTGACTTGGAGCT
CTTCCACAGGTATTGCGGCATTCATAACCCGAGCAGCGTAGTCAAGTGCC
TGGCCTGCAGCAAGTGGTTCTGCAGCGCCCGCGGTAACACCTCGTCCTCC
CATATTGTCAATCACCTCGTTCGGGCCCGCCACAAGGAAGTTCAGTTGCA
TCCGGCCTCATCGCTTGGGGATACGATATTGGAATGCTACAATTGCGGGA
CTAAGAACGTTTTTCTGCTTGGGTTCATTCCGGCCAAGTCTGACACGGTC
GTCGTATTGCTATGCCGTCAACCATGCGCCGCTATGCCATCTTCTAAGGA
TATGAACTGGGATACCTCCCGCTGGCAACCATTGATTGAAGACCGTTCGT
TCTTGCCATGGCTGGTTGCTGCCCCGTCCGACCAGGAACAGCTCCGCGCT
CGCCACCTCAGTCCGCAGTTGATTGCTAAGCTGGAAGAGATGTGGAAGGA
AAATTCTCAAGCGACATTCTCGGATTTGGAGAAGGCCACGGCTGTGGACG
ATGAGCCAGCACCTGTGCTTCTGCGTTATGATGATGCTTTCCAGTATCAG
AACATTTTTGGGCCTTTGGTCAAGATTGAGGCCGACTATGACCGCAAGTT
GAAGGAATCCCAATCGCAGGATGGACTGATCGTGCGCTGGGACCTTGGTC
TCAACAACAAGCATCTGGCTAGCTTCATTTTGCCTAAGCTCGAACTTGGC
GATGTTAAATTGGCCGTGGGAGATGAAATGCGCCTCAAGTATACCGGCGA
ACTGCGGCCCAAATGGGAAGGAGTTGGATATGTCATTAAAATTCCGAACA
ACCAGTCCGATGAAGTGACGATTGAGTTACGCGCAAAGGGTGATCATAAG
TCTGTGCCTACAGAGTGCACGCACAATTTCACAGTTGACTACGTCTGGAA
GTCTACATCATTTGATCGTATGCAGCTGGCTATGAAAACATTTGCCGTGG
ATGAGATGAGTGTGTCTGGTTACATTTTCCATCGCCTTCTCGGACACGAA
GTCGCAGCCGCGCCGATGAAGACCCAAATGCCGAAGAAGTTCAGCGTTCC
GGGACTTCCAGAACTCAACGGTAGTCAGATTAACGCTGTGAAGAGCGTGC
TGCAGAGACCTTTGAGTTTGATTCAAGGACCTCCGGGAACGGGAAAGACT
GTCACCTCGGCTACGATCATCTACCATCTTGCGAAGATCAACGGTGGTCA
GGTGTTGGTGTGCGCCCCCTCGAACGTTGCGGTTGACCAACTTTGTGAGC
GTATCCATCGGACAGGTCTGAAGACTGTGCGTGTGACAGCTAAATCGCGA
GAGGATGTTGAATCGCCGGTTGGCTTCTTGTCCTTGCACGAACAAGTCCG
CATCAACGATACCAACATCGAACTCATTAAGCTCAATCAGCTCAAGGCCG
AGCTTGGAGAGTTGTCCAGTCAAGATGAGAAACGACTGAAACAGCTGACC
CGCTCGGCGGAGCGCGAGATCTTGAATAACGCCGACGTAATCTGCTGTAC
TTGCGTTGGTGCTGGTGATCCTCGTCTGGCGAAGCTCAAGTTCCGTACCG
TCCTGATTGACGAATCGACCCAGTCGGCTGAGCCAGAATGTATGATTCCC
TTGGTTCTCGGATGCAAGCAAGTAGTCCTTGTCGGCGATCACCAACAGCT
GGGACCTGTCATCATGAACAAGAAGGCAGCTAAGGCTGGTCTTAACCAGT
CACTTTTCGAACGTCTCGTCATTCTTGGCTGCTCCCCTATTCGTCTTAAC
GTTCAGTACCGTATGCACCCGTGCCTGTCGGAGTTCCCGTCGAACATGTT
CTATGAAGGTTCTCTACAGAACGGTATCTCTTCGTTTGAGCGTCTCCGCC
GTGACGTCGACTTCCCCTGGCCCATTGCCGATAACCCTATGATGTTCTGG
TCGAACCTGGGTAACGAGGAGATTTCGGCCTCCGGAACCTCTTACCTTAA
CCGCACTGAAGCGACGAACGTGGAGAAAATTGTCACCCGCTTCTTCAAAG
CTGGAGTGCAGCCCCAGGACATTGGTATTATCACTCCTTATGAGGGTCAG
CGCAGCTACATTGTTAGCTCTATGCAAGCTAATGGCACCTTCAAGAAAGA
GCATTACAAGGAGATCGAGGTGGCTTCGGTCGATGCCTTCCAGGGTCGTG
AGAAGGACTTCATCATCCTTTCTTGTGTGCGTTCCAACGACCACCAGGGT
ATTGGTTTCTTAAGTGATCCTCGCCGTCTCAACGTCGCTCTCACTCGTGC
CAAGTATGGTCTGGCCATCCTTGGAAACCCGAAGGTCTTGTCGAAGCATC
CTTTGTGGAACTGTCTCCTGCAGCATTTCAAGGAAAGGCACTGCCTGGTT
GAGGGACCCTTGTCTAACCTGCAAGAGTCTTTGATCCAATTCAGCCGACC
TAAGCAGGCATACCGGGGTCCCCAGCGGTTCCAGATGGCTTACAACCATG
CTTCTAATGTTACCAGCGGGTTGATGAATGGAAGGAACGGTCAGCGCAAT
GACTTCCATGACACCGGCTCAGTGGTTGGTTACATCCCCGATGATGTCTC
TTCCGTCCACTCCTCTGCCCTGGGCGGGGTTGGCATTCCCTCTGGTTATC
CTCCCATGTTCCAGAATTTCGCGGACGCGTGGCCCGCTCTTCCCGGAGCC
CGTCGGGCCAATGGTAACCGTATGAAGGGAGCACCTAGCATTGCCGGAGA
ATCTGTGGCAGCCACCGAGTCCGATGTTACTGGAAGCATCATTGATGGGA
AGAGCGTCGACCAAGGTGGTGTCAGCCTTGCTGGCTTGAGCATCAACGAT
ATGGGCAAGCAGCCCAGTCTCAGTCAGTCCGATCGGCTGAAGCGCTACGT
GGAATCCGGAGGCCGGGAGCCTTACAAGCCCGGTGTTCCCGATAACGGCA
GCATTTTTGGCGGAAGCTCTGCTAGCATTCGTGTCACTCGTGGTGTGCCA
GGCCACATTCACGATGACGATGATACGCGCAGTGTTTCGACTGCATTCGC
CAGTCAGGTTGGGGGCAACTATGATTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:1880612..1883889+ >ATCC64974_101730-T1 ID=ATCC64974_101730-T1|Name=ATCC64974_101730-T1|organism=Aspergillus niger N402|type=CDS|length=6438bp|location=Sequence derived from alignment at OGUI01000017.1:1880612..1883889+ (Aspergillus niger N402)
ATGGCGGCACTTGGCGATGATAGGATTCCGCCGGAGATGGACGACGCAGC
TTCCCAGTTCCGCCCGCGGAGACATGACGATGACGATGATGCTTCCGGAG
ACGACGATGTAGAGAGCACAACTAGTGCTCAGGCAGCCGACAACAAGAAT
CATCAGGGGCATTTTGAGGAGGAGAAAGAACTCCCGCCACATGCATGCGC
GTATTGCGGCATTCATAACCCGAGCAGCGTAGTCAAGTGCCTGGCCTGCA
GCAAGTGGTTCTGCAGCGCCCGCGGTAACACCTCGTCCTCCCATATTGTC
AATCACCTCGTTCGGGCCCGCCACAAGGAAGTTCAGTTGCATCCGGCCTC
ATCGCTTGGGGATACGATATTGGAATGCTACAATTGCGGGACTAAGAACG
TTTTTCTGCTTGGGTTCATTCCGGCCAAGTCTGACACGGTCGTCGTATTG
CTATGCCGTCAACCATGCGCCGCTATGCCATCTTCTAAGGATATGAACTG
GGATACCTCCCGCTGGCAACCATTGATTGAAGACCGTTCGTTCTTGCCAT
GGCTGGTTGCTGCCCCGTCCGACCAGGAACAGCTCCGCGCTCGCCACCTC
AGTCCGCAGTTGATTGCTAAGCTGGAAGAGATGTGGAAGGAAAATTCTCA
AGCGACATTCTCGGATTTGGAGAAGGCCACGGCTGTGGACGATGAGCCAG
CACCTGTGCTTCTGCGTTATGATGATGCTTTCCAGTATCAGAACATTTTT
GGGCCTTTGGTCAAGATTGAGGCCGACTATGACCGCAAGTTGAAGGAATC
CCAATCGCAGGATGGACTGATCGTGCGCTGGGACCTTGGTCTCAACAACA
AGCATCTGGCTAGCTTCATTTTGCCTAAGCTCGAACTTGGCGATGTTAAA
TTGGCCGTGGGAGATGAAATGCGCCTCAAGTATACCGGCGAACTGCGGCC
CAAATGGGAAGGAGTTGGATATGTCATTAAAATTCCGAACAACCAGTCCG
ATGAAGTGACGATTGAGTTACGCGCAAAGGGTGATCATAAGTCTGTGCCT
ACAGAGTGCACGCACAATTTCACAGTTGACTACGTCTGGAAGTCTACATC
ATTTGATCGTATGCAGCTGGCTATGAAAACATTTGCCGTGGATGAGATGA
GTGTGTCTGGTTACATTTTCCATCGCCTTCTCGGACACGAAGTCGCAGCC
GCGCCGATGAAGACCCAAATGCCGAAGAAGTTCAGCGTTCCGGGACTTCC
AGAACTCAACGGTAGTCAGATTAACGCTGTGAAGAGCGTGCTGCAGAGAC
CTTTGAGTTTGATTCAAGGACCTCCGGGAACGGGAAAGACTGTCACCTCG
GCTACGATCATCTACCATCTTGCGAAGATCAACGGTGGTCAGGTGTTGGT
GTGCGCCCCCTCGAACGTTGCGGTTGACCAACTTTGTGAGCGTATCCATC
GGACAGGTCTGAAGACTGTGCGTGTGACAGCTAAATCGCGAGAGGATGTT
GAATCGCCGGTTGGCTTCTTGTCCTTGCACGAACAAGTCCGCATCAACGA
TACCAACATCGAACTCATTAAGCTCAATCAGCTCAAGGCCGAGCTTGGAG
AGTTGTCCAGTCAAGATGAGAAACGACTGAAACAGCTGACCCGCTCGGCG
GAGCGCGAGATCTTGAATAACGCCGACGTAATCTGCTGTACTTGCGTTGG
TGCTGGTGATCCTCGTCTGGCGAAGCTCAAGTTCCGTACCGTCCTGATTG
ACGAATCGACCCAGTCGGCTGAGCCAGAATGTATGATTCCCTTGGTTCTC
GGATGCAAGCAAGTAGTCCTTGTCGGCGATCACCAACAGCTGGGACCTGT
CATCATGAACAAGAAGGCAGCTAAGGCTGGTCTTAACCAGTCACTTTTCG
AACGTCTCGTCATTCTTGGCTGCTCCCCTATTCGTCTTAACGTTCAGTAC
CGTATGCACCCGTGCCTGTCGGAGTTCCCGTCGAACATGTTCTATGAAGG
TTCTCTACAGAACGGTATCTCTTCGTTTGAGCGTCTCCGCCGTGACGTCG
ACTTCCCCTGGCCCATTGCCGATAACCCTATGATGTTCTGGTCGAACCTG
GGTAACGAGGAGATTTCGGCCTCCGGAACCTCTTACCTTAACCGCACTGA
AGCGACGAACGTGGAGAAAATTGTCACCCGCTTCTTCAAAGCTGGAGTGC
AGCCCCAGGACATTGGTATTATCACTCCTTATGAGGGTCAGCGCAGCTAC
ATTGTTAGCTCTATGCAAGCTAATGGCACCTTCAAGAAAGAGCATTACAA
GGAGATCGAGGTGGCTTCGGTCGATGCCTTCCAGGGTCGTGAGAAGGACT
TCATCATCCTTTCTTGTGTGCGTTCCAACGACCACCAGGGTATTGGTTTC
TTAAGTGATCCTCGCCGTCTCAACGTCGCTCTCACTCGTGCCAAGTATGG
TCTGGCCATCCTTGGAAACCCGAAGGTCTTGTCGAAGCATCCTTTGTGGA
ACTGTCTCCTGCAGCATTTCAAGGAAAGGCACTGCCTGGTTGAGGGACCC
TTGTCTAACCTGCAAGAGTCTTTGATCCAATTCAGCCGACCTAAGCAGGC
ATACCGGGGTCCCCAGCGGTTCCAGATGGCTTACAACCATGCTTCTAATG
TTACCAGCGGGTTGATGAATGGAAGGAACGGTCAGCGCAATGACTTCCAT
GACACCGGCTCAGTGGTTGGTTACATCCCCGATGATGTCTCTTCCGTCCA
CTCCTCTGCCCTGGGCGGGGTTGGCATTCCCTCTGGTTATCCTCCCATGT
TCCAGAATTTCGCGGACGCGTGGCCCGCTCTTCCCGGAGCCCGTCGGGCC
AATGGTAACCGTATGAAGGGAGCACCTAGCATTGCCGGAGAATCTGTGGC
AGCCACCGAGTCCGATGTTACTGGAAGCATCATTGATGGGAAGAGCGTCG
ACCAAGGTGGTGTCAGCCTTGCTGGCTTGAGCATCAACGATATGGGCAAG
CAGCCCAGTCTCAGTCAGTCCGATCGGCTGAAGCGCTACGTGGAATCCGG
AGGCCGGGAGCCTTACAAGCCCGGTGTTCCCGATAACGGCAGCATTTTTG
GCGGAAGCTCTGCTAGCATTCGTGTCACTCGTGGTGTGCCAGGCCACATT
CACGATGACGATGATACGCGCAGTGTTTCGACTGCATTCGCCAGTCAGGT
TGGGGGCAACTATGATTGAATGGCGGCACTTGGCGATGATAGGATTCCGC
CGGAGATGGACGACGCAGCTTCCCAGTTCCGCCCGCGGAGACATGACGAT
GACGATGATGCTTCCGGAGACGACGATGTAGAGAGCACAACTAGTGCTCA
GGCAGCCGACAACAAGAATCATCAGGGGCATTTTGAGGAGGAGAAAGAAC
TCCCGCCACATGCATGCGCGTATTGCGGCATTCATAACCCGAGCAGCGTA
GTCAAGTGCCTGGCCTGCAGCAAGTGGTTCTGCAGCGCCCGCGGTAACAC
CTCGTCCTCCCATATTGTCAATCACCTCGTTCGGGCCCGCCACAAGGAAG
TTCAGTTGCATCCGGCCTCATCGCTTGGGGATACGATATTGGAATGCTAC
AATTGCGGGACTAAGAACGTTTTTCTGCTTGGGTTCATTCCGGCCAAGTC
TGACACGGTCGTCGTATTGCTATGCCGTCAACCATGCGCCGCTATGCCAT
CTTCTAAGGATATGAACTGGGATACCTCCCGCTGGCAACCATTGATTGAA
GACCGTTCGTTCTTGCCATGGCTGGTTGCTGCCCCGTCCGACCAGGAACA
GCTCCGCGCTCGCCACCTCAGTCCGCAGTTGATTGCTAAGCTGGAAGAGA
TGTGGAAGGAAAATTCTCAAGCGACATTCTCGGATTTGGAGAAGGCCACG
GCTGTGGACGATGAGCCAGCACCTGTGCTTCTGCGTTATGATGATGCTTT
CCAGTATCAGAACATTTTTGGGCCTTTGGTCAAGATTGAGGCCGACTATG
ACCGCAAGTTGAAGGAATCCCAATCGCAGGATGGACTGATCGTGCGCTGG
GACCTTGGTCTCAACAACAAGCATCTGGCTAGCTTCATTTTGCCTAAGCT
CGAACTTGGCGATGTTAAATTGGCCGTGGGAGATGAAATGCGCCTCAAGT
ATACCGGCGAACTGCGGCCCAAATGGGAAGGAGTTGGATATGTCATTAAA
ATTCCGAACAACCAGTCCGATGAAGTGACGATTGAGTTACGCGCAAAGGG
TGATCATAAGTCTGTGCCTACAGAGTGCACGCACAATTTCACAGTTGACT
ACGTCTGGAAGTCTACATCATTTGATCGTATGCAGCTGGCTATGAAAACA
TTTGCCGTGGATGAGATGAGTGTGTCTGGTTACATTTTCCATCGCCTTCT
CGGACACGAAGTCGCAGCCGCGCCGATGAAGACCCAAATGCCGAAGAAGT
TCAGCGTTCCGGGACTTCCAGAACTCAACGGTAGTCAGATTAACGCTGTG
AAGAGCGTGCTGCAGAGACCTTTGAGTTTGATTCAAGGACCTCCGGGAAC
GGGAAAGACTGTCACCTCGGCTACGATCATCTACCATCTTGCGAAGATCA
ACGGTGGTCAGGTGTTGGTGTGCGCCCCCTCGAACGTTGCGGTTGACCAA
CTTTGTGAGCGTATCCATCGGACAGGTCTGAAGACTGTGCGTGTGACAGC
TAAATCGCGAGAGGATGTTGAATCGCCGGTTGGCTTCTTGTCCTTGCACG
AACAAGTCCGCATCAACGATACCAACATCGAACTCATTAAGCTCAATCAG
CTCAAGGCCGAGCTTGGAGAGTTGTCCAGTCAAGATGAGAAACGACTGAA
ACAGCTGACCCGCTCGGCGGAGCGCGAGATCTTGAATAACGCCGACGTAA
TCTGCTGTACTTGCGTTGGTGCTGGTGATCCTCGTCTGGCGAAGCTCAAG
TTCCGTACCGTCCTGATTGACGAATCGACCCAGTCGGCTGAGCCAGAATG
TATGATTCCCTTGGTTCTCGGATGCAAGCAAGTAGTCCTTGTCGGCGATC
ACCAACAGCTGGGACCTGTCATCATGAACAAGAAGGCAGCTAAGGCTGGT
CTTAACCAGTCACTTTTCGAACGTCTCGTCATTCTTGGCTGCTCCCCTAT
TCGTCTTAACGTTCAGTACCGTATGCACCCGTGCCTGTCGGAGTTCCCGT
CGAACATGTTCTATGAAGGTTCTCTACAGAACGGTATCTCTTCGTTTGAG
CGTCTCCGCCGTGACGTCGACTTCCCCTGGCCCATTGCCGATAACCCTAT
GATGTTCTGGTCGAACCTGGGTAACGAGGAGATTTCGGCCTCCGGAACCT
CTTACCTTAACCGCACTGAAGCGACGAACGTGGAGAAAATTGTCACCCGC
TTCTTCAAAGCTGGAGTGCAGCCCCAGGACATTGGTATTATCACTCCTTA
TGAGGGTCAGCGCAGCTACATTGTTAGCTCTATGCAAGCTAATGGCACCT
TCAAGAAAGAGCATTACAAGGAGATCGAGGTGGCTTCGGTCGATGCCTTC
CAGGGTCGTGAGAAGGACTTCATCATCCTTTCTTGTGTGCGTTCCAACGA
CCACCAGGGTATTGGTTTCTTAAGTGATCCTCGCCGTCTCAACGTCGCTC
TCACTCGTGCCAAGTATGGTCTGGCCATCCTTGGAAACCCGAAGGTCTTG
TCGAAGCATCCTTTGTGGAACTGTCTCCTGCAGCATTTCAAGGAAAGGCA
CTGCCTGGTTGAGGGACCCTTGTCTAACCTGCAAGAGTCTTTGATCCAAT
TCAGCCGACCTAAGCAGGCATACCGGGGTCCCCAGCGGTTCCAGATGGCT
TACAACCATGCTTCTAATGTTACCAGCGGGTTGATGAATGGAAGGAACGG
TCAGCGCAATGACTTCCATGACACCGGCTCAGTGGTTGGTTACATCCCCG
ATGATGTCTCTTCCGTCCACTCCTCTGCCCTGGGCGGGGTTGGCATTCCC
TCTGGTTATCCTCCCATGTTCCAGAATTTCGCGGACGCGTGGCCCGCTCT
TCCCGGAGCCCGTCGGGCCAATGGTAACCGTATGAAGGGAGCACCTAGCA
TTGCCGGAGAATCTGTGGCAGCCACCGAGTCCGATGTTACTGGAAGCATC
ATTGATGGGAAGAGCGTCGACCAAGGTGGTGTCAGCCTTGCTGGCTTGAG
CATCAACGATATGGGCAAGCAGCCCAGTCTCAGTCAGTCCGATCGGCTGA
AGCGCTACGTGGAATCCGGAGGCCGGGAGCCTTACAAGCCCGGTGTTCCC
GATAACGGCAGCATTTTTGGCGGAAGCTCTGCTAGCATTCGTGTCACTCG
TGGTGTGCCAGGCCACATTCACGATGACGATGATACGCGCAGTGTTTCGA
CTGCATTCGCCAGTCAGGTTGGGGGCAACTATGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005524 | ATP binding |
| GO:0008270 | zinc ion binding |
| GO:0004386 | helicase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_101730-T1 | ATCC64974_101730-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR040812 |
| DBxref | InterPro:IPR041679 |
| DBxref | InterPro:IPR041677 |
| DBxref | InterPro:IPR018999 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF09416 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF18141 |
| DBxref | PFAM:PF13604 |
| DBxref | PFAM:PF13245 |
| DBxref | PFAM:PF13087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:1880612..1883889 + |
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