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ATCC64974_101800-T1, ATCC64974_101800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_101800-T1
Unique NameATCC64974_101800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1908067..1909486-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_101800-T1 ID=ATCC64974_101800-T1|Name=ATCC64974_101800-T1|organism=Aspergillus niger N402|type=mRNA|length=1420bp|location=Sequence derived from alignment at OGUI01000017.1:1908067..1909486- (Aspergillus niger N402)
ATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGAT
CTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGG
CCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTC
TGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTT
CTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGGGTATGTGAGC
TCCCCTACTGTGGCGCCTCCCGGCCCTCCTGGTGCTGCATGTCTCCTTTC
CCGCCCGCTTCGGCAGTTCAATGATCCCCCACACCATTACGTTCCATGCT
AATGTATCCAACCCGCAAAGGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATCTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATGTATGTCCGGATTCAAGCTACCCCCCAACTTCTACCTCCCGAGCC
TTGAAACTGACATGATGCGGTCTTGTATAGTCGAATCATTACAGCCTCTT
TACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACCT
GGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCAT
TTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCC
ATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCA
AGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGG
AGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGG
TTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACGGATTTCAG
CGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGC
TGGCGGAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGC
CGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAA
GAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTGCGGGAGC
TGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTC
AGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCA
TCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAG
AGGCAAAGTTGTCCCGATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1908067..1909486-

>ATCC64974_101800-T1 ID=ATCC64974_101800-T1|Name=ATCC64974_101800-T1|organism=Aspergillus niger N402|type=CDS|length=3645bp|location=Sequence derived from alignment at OGUI01000017.1:1908067..1909486- (Aspergillus niger N402)
TCGAATCATTACAGCCTCTTTACGACTCTCTCGACGTCCCGGACACGGAC
ATCCGCTCTGCATGGAACCTGGTCAACCCTTCTGCATCCCCGACCATCAA
CAAAGACGCTACCCTTGCATTTCTGCATATGCTCAACTACCGCCACGAGG
GCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAG
AACAACCATATTGACTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATG
GGGCGCAAGCGGCGATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCG
GAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACA
CCCAAGGGAACGGATTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAA
GGTCCGGTTGAGGCGCGAGCTGGCGGAGATGGAGTCTAAGCTGGATTCCG
CTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCTCGAAACGACGGTCGG
CCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAA
GGAGCGGGAGCTGCGGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACG
GCCAGAACGTAGAACGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAG
GTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGA
TCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCCGATAAGAATTACAAG
CAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCAT
TTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCG
GATAGAAGACGAGGACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGT
ACATGAACCCGTCTGATAAGTCTAAATATGAAGAAATCTATCTCGCGAAC
AAAAACCGCCGCGGGGAAATCTCATATGTCAACCAAGAAGATCGAGCAGT
GGGAAATCGAACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCGGCCAG
CCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGTCGGCT
TCGTGATGACCAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGACGGCG
ATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGGTGTTC
GACCTTGTGAACGGGTCGAATCATTACAGCCTCTTTACGACTCTCTCGAC
GTCCCGGACACGGACATCCGCTCTGCATGGAACCTGGTCAACCCTTCTGC
ATCCCCGACCATCAACAAAGACGCTACCCTTGCATTTCTGCATATGCTCA
ACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTG
CGCGCTTCATTCGAGAACAACCATATTGACTACCAAGTCGACAATGCCCG
TCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGGAGACCCTCACAGGCC
GGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGA
AAGACCTCCTATACACCCAAGGGAACGGATTTCAGCGACACCATCCAGGA
TGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGCTGGCGGAGATGGAGT
CTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCT
CGAAACGACGGTCGGCCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCA
GCTGCTGGAGTACAAGGAGCGGGAGCTGCGGGAGCTGCGTGAAGGCGCAG
GCCGATCCAAAGACGGCCAGAACGTAGAACGTCTCAGAGATGATGTCAAG
ACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAA
GGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCC
GATAAGAATTACAAGCAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCC
GAATCCAAAGCTCATTTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCC
GGAGCAGTTCGAGCGGATAGAAGACGAGGACGATACTCCCGGCCTGAAAG
ATGGGTTTGAATGGTACATGAACCCGTCTGATAAGTCTAAATATGAAGAA
ATCTATCTCGCGAACAAAAACCGCCGCGGGGAAATCTCATATGTCAACCA
AGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGATCTTCGCATCG
CTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACT
CAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTCTGGGACCTGG
CAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCC
ATGCGATTGGTGTTCGACCTTGTGAACGGGTCGAATCATTACAGCCTCTT
TACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACCT
GGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCAT
TTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCC
ATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCA
AGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGG
AGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGG
TTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACGGATTTCAG
CGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGC
TGGCGGAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGC
CGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAA
GAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTGCGGGAGC
TGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTC
AGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCA
TCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAG
AGGCAAAGTTGTCCCGATAAGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATCTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGG
GAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCA
AGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAA
AGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAG
GAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007015actin filament organization
GO:0006897endocytosis
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
END3ATCC64974_101800Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101800-T1ATCC64974_101800-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101800-T1.cdsATCC64974_101800-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101800-T1.exon3ATCC64974_101800-T1.exon3Aspergillus niger N402exon
ATCC64974_101800-T1.exon2ATCC64974_101800-T1.exon2Aspergillus niger N402exon
ATCC64974_101800-T1.exon1ATCC64974_101800-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR025604
DBxrefInterPro:IPR000261
DBxrefInterPro:IPR002048
DBxrefPFAM:PF12761
DBxrefPFAM:PF12763
DBxrefPFAM:PF00036
Productendocytosis defective- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1908067..1909486 -
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