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ATCC64974_101910-T1, ATCC64974_101910-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_101910-T1
Unique NameATCC64974_101910-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1946974..1948131-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_101910-T1 ID=ATCC64974_101910-T1|Name=ATCC64974_101910-T1|organism=Aspergillus niger N402|type=mRNA|length=1158bp|location=Sequence derived from alignment at OGUI01000017.1:1946974..1948131- (Aspergillus niger N402)
ATGGTGAGTTTTGCTGTAATTCTCAAGAGACTGGGAACCGACTTCAACGC
AAATTCCCCCCTCGCCTGAACGTAAATTTCAGGTCATCCCACATGGGCGA
CCGCACTGTGGGATTGGAAACGGGTCTTTGCAAGATGCTTCGGACGGTCT
TTCTCTGAAGCGCAAATTGCTGACTCGACTGTGTCTTGTAGCCTTTCCAC
AAGCTCGTCAAGAACAGCGCTTACTACAGGTAAGAAATCCACAAGACCCC
TCATTTGGCAAAAATTTGGCATAAACTAATAAAATTCCTTCTACAGCCGC
TACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACTACTATGC
CCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCCAAGT
ACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGATCGTC
TACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCCACGA
GCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCCGCCT
ACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGGCCTG
GATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCCTCAC
CGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCTTTCC
TTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGGTGCC
ATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGAGCCG
CTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACTCTCC
GCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCTTGCC
GACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGGAGGC
TGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCACAAGG
CCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAAGAAG
ACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGCGCCT
CACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAGCTTG
CTGCTTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1946974..1948131-

>ATCC64974_101910-T1 ID=ATCC64974_101910-T1|Name=ATCC64974_101910-T1|organism=Aspergillus niger N402|type=CDS|length=2709bp|location=Sequence derived from alignment at OGUI01000017.1:1946974..1948131- (Aspergillus niger N402)
CCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACTACT
ATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCCCCC
AAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCAGAT
CGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACTCCC
ACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCTGCC
GCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCTCGG
CCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACACCC
TCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAGGCT
TTCCTTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTTCGG
TGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCGAGA
GCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAGACT
CTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGGTCT
TGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACCAGG
AGGCTGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCCCAC
AAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGAGAA
GAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGCAGC
GCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGTGAG
CTTGCTGCTTAACCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTACAG
ATGCCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCGACT
ACTATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAACGCC
CCCAAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCACCCA
GATCGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCTACT
CCCACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGGGCT
GCCGCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAAGCT
CGGCCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGTACA
CCCTCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTCAAG
GCTTTCCTTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGTCTT
CGGTGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACTCCG
AGAGCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCTGAG
ACTCTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGAGGG
TCTTGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGTACC
AGGAGGCTGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAGGCC
CACAAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGGTGA
GAAGAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCCAGC
AGCGCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATCCGT
GAGCTTGCTGCTTAACCTTTCCACAAGCTCGTCAAGAACAGCGCTTACTA
CAGATGCCGCTACCAGACCAAGTACCGTCGTCGCCGTGAGGGTAAGACCG
ACTACTATGCCCGTAAGCGCTTGATCACCCAGGCCAAGAACAAGTACAAC
GCCCCCAAGTACCGCCTGGTCGTCCGCTTCACCAACCGCGACATCATCAC
CCAGATCGTCTACTCTGAGATCTCCGGTGACAAGGTCTTCGCCAGCGCCT
ACTCCCACGAGCTCAAGCGCTATGGCATCACCAACGGTCTGACCAACTGG
GCTGCCGCCTACGCCACCGGTCTCCTCCTTGCCCGCCGTACCCTCAAGAA
GCTCGGCCTGGATGAGCAGTTCCCCGGTGTTGAGGAGGCCGATGGTGAGT
ACACCCTCACCGAGGCTGCTGAGACCGACGAGGGCTCCCGCCGCCCCTTC
AAGGCTTTCCTTGATGTTGGTCTTGCCCGTACCTCCACTGGTGCCCGTGT
CTTCGGTGCCATGAAGGGTGCCTCCGACGGTGGTATCTTCGTCCCCCACT
CCGAGAGCCGCTTCCCCGGTTTCGACATCGAGTCCGAGGAGCTCGACGCT
GAGACTCTCCGCAACTACATCTTCGGTGGCCACGTCGCTGAGTACATGGA
GGGTCTTGCCGACGACGATGAGGAGCGTTTCACCTCCCAGTTCCACAAGT
ACCAGGAGGCTGGTGTTGAGGCTGGTGACATTGAGGAGCTCTACACTGAG
GCCCACAAGGCCATCCGTGAGGACCCCTTCAAGAAGGACGAGGATGCTGG
TGAGAAGAAGACCAAGGAGGAGTGGAAGGCCGAGAGCAAGAAGTTCCGCC
AGCAGCGCCTCACCCGCGAGCAGCGCAAGGAGCGTGTTGAGCAGAAGATC
CGTGAGCTTGCTGCTTAACCTTTCCACAAGCTCGTCAAGAACAGCGCTTA
CTACAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:00080975S rRNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL5ATCC64974_101910Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101910-T1ATCC64974_101910-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101910-T1.cdsATCC64974_101910-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101910-T1.exon3ATCC64974_101910-T1.exon3Aspergillus niger N402exon
ATCC64974_101910-T1.exon2ATCC64974_101910-T1.exon2Aspergillus niger N402exon
ATCC64974_101910-T1.exon1ATCC64974_101910-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926419M
DBxrefInterPro:IPR025607
DBxrefInterPro:IPR005485
DBxrefPFAM:PF17144
DBxrefPFAM:PF14204
Product60S ribosomal protein L5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1946974..1948131 -
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