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ATCC64974_102000-T1, ATCC64974_102000-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102000-T1
Unique NameATCC64974_102000-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1970370..1971950-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102000-T1 ID=ATCC64974_102000-T1|Name=ATCC64974_102000-T1|organism=Aspergillus niger N402|type=mRNA|length=1581bp|location=Sequence derived from alignment at OGUI01000017.1:1970370..1971950- (Aspergillus niger N402)
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGTAATCTACC
GACCGCTTTCCTCGACAACATGGCCTGGAAGGAATCTCGATCTAACTGCA
CTTTTAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGT
TCAAGGGTCAGAAGGATACTGATGTATGTCGCGTCCCGGGCAACGCCTGA
AACATTTTTTTGCTTCCATCCTTTGGTCCGGTAGCTTCCGCCGCAACCTG
CGACAACGGCCTGTATTCGACAGCTCTTCCGAAGGATGGATCATTTCTGA
ATGGCGTTGTTGACATTATGTGTCCTGATAGGGAAAATACACTGTTACTC
TGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGAT
ATCTTCGCTGCCGCAAACGTACGCCTCCCGCTACTTCCGATCGCCTCTAG
TATACAAATCCAGCGATGCTAAATTACCTGTGTGCAGGCCCCTATCAAGT
GGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATC
CCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGG
TCCTCTTGCTGTATGTCCATGCTTCCTAGACTGTTTTGCGATAAGTCTTT
CTCTAAACGCTTTGTCACATAGACCCCCGTCGGCAAGGGACACGTCTCTC
TGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCC
TGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGT
CCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCG
TCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCC
GAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAA
GAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTC
TCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAG
TTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCC
CACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACA
TTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCC
TCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTC
CGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTC
TGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACT
CGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGTAAGCTA
GCATTTTATCAAAGTGACGGTACCATTGCGAGACACGATGCTAACAATTG
CGATTTTAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGA
GTATGCTGAGGCCATCATGAAGCGTCTGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1970370..1971950-

>ATCC64974_102000-T1 ID=ATCC64974_102000-T1|Name=ATCC64974_102000-T1|organism=Aspergillus niger N402|type=CDS|length=6948bp|location=Sequence derived from alignment at OGUI01000017.1:1970370..1971950- (Aspergillus niger N402)
GCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGA
GGCCATCATGAAGCGTCTGTAAACCCCCGTCGGCAAGGGACACGTCTCTC
TGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCC
TGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGT
CCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCG
TCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCC
GAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAA
GAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTC
TCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAG
TTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCC
CACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACA
TTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCC
TCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTC
CGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTC
TGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACT
CGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCCTAT
CAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCG
CCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTC
AAGGGTCCTCTTGCTGGAAAATACACTGTTACTCTGATCGAGGGTGATGG
TATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAA
ACCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAG
GGTCAGAAGGATACTGATATGATTGCCGCCAGGAACTTTGTCGCTCCCGC
CCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCT
TCTCGCAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAG
TATGCTGAGGCCATCATGAAGCGTCTGTAAACCCCCGTCGGCAAGGGACA
CGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACG
TCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTC
GACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGA
GCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGG
AGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATC
AACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTC
CGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCG
ACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTT
ACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTA
TGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTC
TGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTC
CACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGC
TCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGC
ACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAG
GCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGG
CAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACG
TTGCGCTCAAGGGTCCTCTTGCTGGAAAATACACTGTTACTCTGATCGAG
GGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGC
TGCCGCAAACCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTA
AGTTCAAGGGTCAGAAGGATACTGATATGATTGCCGCCAGGAACTTTGTC
GCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGC
CTCGCCCTTCTCGCAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGA
CCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAAACCCCCGTCGGC
AAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTT
CGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACG
ACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACTCC
GGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCAT
CACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTC
GTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATG
AAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGA
GTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGA
AGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGCCC
AACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGG
TCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCG
AGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAAC
CCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGTCT
GAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCG
AAGGAAAGGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTG
AAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGAA
GAACTACGTTGCGCTCAAGGGTCCTCTTGCTGGAAAATACACTGTTACTC
TGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGAT
ATCTTCGCTGCCGCAAACCTCCGCACTTACTCCGCCGCTGCCGATGAGCG
CGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATATGATTGCCGCCAGGA
ACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCT
CGCATTGCCTCGCCCTTCTCGCAGGCCCTCACCGGTGACTTGGGTGGTTC
CGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAAACCC
CCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTC
AACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGAC
CCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGGTG
AATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATC
AAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCA
GTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCA
CCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATT
GCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTC
GTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCTTG
TCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTCTG
ATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTC
CATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTC
TTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCAC
ATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGACAC
CCTCGCCGAAGGAAAGGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTC
CCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAGC
GTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTGGAAAATACAC
TGTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGG
TGAAGGATATCTTCGCTGCCGCAAACCTCCGCACTTACTCCGCCGCTGCC
GATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATATGATTGC
CGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTG
TGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGCCCTCACCGGTGACTTG
GGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGCGTCT
GTAAACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTC
GTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGT
TACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACAC
CGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCC
AGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTC
GCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCA
CAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTC
GTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTG
GACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAA
GGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCG
CCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGAC
GAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGG
CAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGC
TTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACT
TTCGACACCCTCGCCGAAGGAAAGGCCCCTATCAAGTGGGAGCCCGTCGA
TGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCA
TCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTGGA
AAATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTC
CCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACCTCCGCACTTACTCCG
CCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGAT
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGCCCTCACCG
GTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATG
AAGCGTCTGTAAACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGAC
CCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCG
TTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGT
GAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGG
TGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGC
TCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGT
GTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAA
CCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTG
AGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTAC
AACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGA
TATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACA
TTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGAC
ATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTAT
CATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGA
AGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCCTATCAAGTGGGAG
CCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGA
CGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTC
TTGCTGGAAAATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCCC
GAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACCTCCGCAC
TTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGG
ATACTGATATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGC
TTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH2ATCC64974_102000Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102000-T1ATCC64974_102000-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102000-T1.cdsATCC64974_102000-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102000-T1.exon6ATCC64974_102000-T1.exon6Aspergillus niger N402exon
ATCC64974_102000-T1.exon5ATCC64974_102000-T1.exon5Aspergillus niger N402exon
ATCC64974_102000-T1.exon4ATCC64974_102000-T1.exon4Aspergillus niger N402exon
ATCC64974_102000-T1.exon3ATCC64974_102000-T1.exon3Aspergillus niger N402exon
ATCC64974_102000-T1.exon2ATCC64974_102000-T1.exon2Aspergillus niger N402exon
ATCC64974_102000-T1.exon1ATCC64974_102000-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004434
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
ProductNAD-dependent isocitrate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1970370..1971950 -
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