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ATCC64974_102250-T1, ATCC64974_102250-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102250-T1
Unique NameATCC64974_102250-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2043393..2044665+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102250-T1 ID=ATCC64974_102250-T1|Name=ATCC64974_102250-T1|organism=Aspergillus niger N402|type=mRNA|length=1273bp|location=Sequence derived from alignment at OGUI01000017.1:2043393..2044665+ (Aspergillus niger N402)
ATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAA
GGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCG
CCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATT
GTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCA
GAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGG
GCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAG
GTGACGGATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTC
TGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCA
GCGCCAACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATG
CGCCGCTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGA
GACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCC
TTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTC
GAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGA
GGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGAC
CCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGC
AGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGC
CCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCA
AGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTG
AAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCG
TGGCCGTGGTGGAAACCGTGGTCGTGACAACCGCGACTGGAGGGAGCGCC
GCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAG
GAGGAGCGCACTGAGGTTCAGAAGGATGCTCGGTATGTATTTACCTCTGC
TTCCCCCCTATCACCACCTTCACTACCCCATTTCTCAAAGCAAATGTATA
CTAACAAAACACCCCAGCGGTGTCCCCATTGTTCAGAGCACCGCCGAAAC
CGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACGGCGACCACCCGGCCA
AGAAGGTGGACGCCAAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2043393..2044665+

>ATCC64974_102250-T1 ID=ATCC64974_102250-T1|Name=ATCC64974_102250-T1|organism=Aspergillus niger N402|type=CDS|length=2376bp|location=Sequence derived from alignment at OGUI01000017.1:2043393..2044665+ (Aspergillus niger N402)
ATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAA
GGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCG
CCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATT
GTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCA
GAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGG
GCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAG
GTGACGGATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTC
TGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCA
GCGCCAACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATG
CGCCGCTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGA
GACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCC
TTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTC
GAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGA
GGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGAC
CCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGC
AGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGC
CCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCA
AGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTG
AAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCG
TGGCCGTGGTGGAAACCGTGGTCGTGACAACCGCGACTGGAGGGAGCGCC
GCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAG
GAGGAGCGCACTGAGGTTCAGAAGGATGCTCGCGGTGTCCCCATTGTTCA
GAGCACCGCCGAAACCGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACG
GCGACCACCCGGCCAAGAAGGTGGACGCCAAGGAGTAAATGTCCGAAGAG
CAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAAGGATGTCCAGAA
CGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCGCCAACGGTACTG
AGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATTGTCGAGGCCGCC
GCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCAGAAGGAATCCAA
GACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGGGCCGCTTCAACC
GCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAGGTGACGGATGAC
CCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTCTGACTCCAACCT
GCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCAGCGCCAACCGTT
CCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATGCGCCGCTTCCAG
CCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGAGACGCTTGAGCT
GACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCCTTCCGGAGTCCG
TGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTCGAGGACCAGGCC
ATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGAGGAGCCGACTAC
CCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGACCCGTCAACGCCA
TCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGCAGTGTTTTCGTT
GAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGCCCTGGACCCCAA
GCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCAAGAAGGATTACT
GCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTGAAGCCCAGCGGC
TCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCGTGGCCGTGGTGG
AAACCGTGGTCGTGACAACCGCGACTGGAGGGAGCGCCGCGCGGCTGACC
AGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAGGAGGAGCGCACT
GAGGTTCAGAAGGATGCTCGCGGTGTCCCCATTGTTCAGAGCACCGCCGA
AACCGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACGGCGACCACCCGG
CCAAGAAGGTGGACGCCAAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_102250ATCC64974_102250Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102250-T1.exon1ATCC64974_102250-T1.exon1Aspergillus niger N402exon
ATCC64974_102250-T1.exon2ATCC64974_102250-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102250-T1.cdsATCC64974_102250-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102250-T1ATCC64974_102250-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR006630
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR002344
DBxrefPFAM:PF00076
DBxrefPFAM:PF05383
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2043393..2044665 +
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