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ATCC64974_102320-T1, ATCC64974_102320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102320-T1
Unique NameATCC64974_102320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2070498..2072306-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102320-T1 ID=ATCC64974_102320-T1|Name=ATCC64974_102320-T1|organism=Aspergillus niger N402|type=mRNA|length=1809bp|location=Sequence derived from alignment at OGUI01000017.1:2070498..2072306- (Aspergillus niger N402)
ATGGATCTTTTGTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCA
TATTCTCCCACCTCTTGAGCGGAGCCATATCAGCACGGTCGACTTGATCA
CTCTCGACACTCTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGAT
GTCCGCCGATTGTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGG
TTTCAAGGAGAACAGAGATCCCGATGCTGATGAGCCGAGCTCCAGCCTCA
GTGTTGATGTTCCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTC
CAGTGGAGTGCGATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGA
TGGCGGCATACCGACGGGTTATGTGACCGAGGTGACTGGTGAGAGGTGCG
TATACTCGCTCCCCAGAGTGAGTCCGTCCGTATTCGAGGCGTCCTGACCT
AATGGGCTAATCGGTCACAGTGGGAGTGGCAAGACGCAATTCCTTCTCAC
CCTTCTCCTGGCCGCCCAACTTCCTGCACCCCGTGGTCTGGACAAGTGTG
CCATATACATTTCCACAGAAGCTCCGTTATCGACGCCACGGCTTTCGCAG
CTCATTGAATTCCATCCTTATCTATCTTCCTTGTCGCAAGCTCACACGCC
CTCGCTGGAGAAGATATTGTCTATCAATGCCATGGATCTCGAGGCACAAG
ATCACATCCTCAACTACCAACTCCCTGTTGCAATCAAGCGATATAATGTC
GGATTGGTCGTCATTGACTCCATAACTGCAAATTACCGGGCAGAACATTC
GTCCCATAATCTGTCGGGCTTGTCCACACGGTCTGGCGAGCTTTCCAGAT
TAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAAATGTCGCAGTTGTA
GTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCTGGCAGGCACCCAAC
ACTAATACGTTCGAATGGCGGTGTCATCTCATCTATTCCTTCAACGCAAC
AGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTGTTACACCGTTGCCA
CGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTGACTCCTCATAACCC
GATCCTTCAATCCTCTCCGTCTAGTCTTCCCTCGTCACCGTACACCACAG
AGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCATACCTGATTGGCAAC
CCTGTACGAAACGAGATCTTGAGTCTTCTACACCAGCAGCGGTTCTTCAC
CGGGTGGGGTGACACGCTACAACCTACTATCTCAAGCCTGTACCCAGCTT
TCCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCTTGGTTTGGTCTACC
CAGATTGCATGTCGCATTGCACTGAAAAAGGAGACCCGCTTTGTGGATTG
GGAGGCCATTCTAGAGGACACGTTTGTCTCCAGCGAGCAGCATTTGCTGC
CTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATTCACGAGTAGCAATG
GAGAATGAAGAACAATCTAGGGCACACCACCCTGCAGTCTGTGCACCACC
GGACGAGACCGATGCAGTAGACGATAAGACGAATCTCGATGTCCCGAATA
CTGTCCGTGATGATCATGCAGCAACCGGGCAATCCTCACCATTGTCATCA
CAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAACTTGTATTTGCCCC
CTGGACTGCCGGCCCAGTCACAGAGCAAGGCGAGATCCAACACGAGGCGG
AGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTACAGAGGATTTTGAC
ACCATCTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:2070498..2072306-

>ATCC64974_102320-T1 ID=ATCC64974_102320-T1|Name=ATCC64974_102320-T1|organism=Aspergillus niger N402|type=CDS|length=3468bp|location=Sequence derived from alignment at OGUI01000017.1:2070498..2072306- (Aspergillus niger N402)
TGGGAGTGGCAAGACGCAATTCCTTCTCACCCTTCTCCTGGCCGCCCAAC
TTCCTGCACCCCGTGGTCTGGACAAGTGTGCCATATACATTTCCACAGAA
GCTCCGTTATCGACGCCACGGCTTTCGCAGCTCATTGAATTCCATCCTTA
TCTATCTTCCTTGTCGCAAGCTCACACGCCCTCGCTGGAGAAGATATTGT
CTATCAATGCCATGGATCTCGAGGCACAAGATCACATCCTCAACTACCAA
CTCCCTGTTGCAATCAAGCGATATAATGTCGGATTGGTCGTCATTGACTC
CATAACTGCAAATTACCGGGCAGAACATTCGTCCCATAATCTGTCGGGCT
TGTCCACACGGTCTGGCGAGCTTTCCAGATTAGGCCACATGCTGAGGAAC
CTGGCTGTGGAGGAAAATGTCGCAGTTGTAGTAGCGAACCAAGTTTCTGA
TCGCATTGAAGCTGCTGGCAGGCACCCAACACTAATACGTTCGAATGGCG
GTGTCATCTCATCTATTCCTTCAACGCAACAGCAAGTGCCGTCGTCACGT
CACGAGTTAGAAGCTGTTACACCGTTGCCACGAAATCGACCTCTTGAGTC
CCGGAATGTCGAACTGACTCCTCATAACCCGATCCTTCAATCCTCTCCGT
CTAGTCTTCCCTCGTCACCGTACACCACAGAGGATGACCCGCAGCAGCAG
CAGTTCGACGGGTCATACCTGATTGGCAACCCTGTACGAAACGAGATCTT
GAGTCTTCTACACCAGCAGCGGTTCTTCACCGGGTGGGGTGACACGCTAC
AACCTACTATCTCAAGCCTGTACCCAGCTTTCCAACAAGCTGCACAGAAG
ACCCCTGCTCTAGGCTTGGTTTGGTCTACCCAGATTGCATGTCGCATTGC
ACTGAAAAAGGAGACCCGCTTTGTGGATTGGGAGGCCATTCTAGAGGACA
CGTTTGTCTCCAGCGAGCAGCATTTGCTGCCTACAGCAAGAGAGCAGGCC
AATGAGCCCCCGGATTCACGAGTAGCAATGGAGAATGAAGAACAATCTAG
GGCACACCACCCTGCAGTCTGTGCACCACCGGACGAGACCGATGCAGTAG
ACGATAAGACGAATCTCGATGTCCCGAATACTGTCCGTGATGATCATGCA
GCAACCGGGCAATCCTCACCATTGTCATCACAGGCAGTTACACAAGGCGT
TCGAAGAACCATGAAACTTGTATTTGCCCCCTGGACTGCCGGCCCAGTCA
CAGAGCAAGGCGAGATCCAACACGAGGCGGAGTTTGAAATCTGGAAGGGT
GGGCTGAGGGGCTGTACAGAGGATTTTGACACCATCTAGATGGATCTTTT
GTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCATATTCTCCCAC
CTCTTGAGCGGAGCCATATCAGCACGGTCGACTTGATCACTCTCGACACT
CTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGATGTCCGCCGATT
GTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGGTTTCAAGGAGA
ACAGAGATCCCGATGCTGATGAGCCGAGCTCCAGCCTCAGTGTTGATGTT
CCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTCCAGTGGAGTGC
GATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGATGGCGGCATAC
CGACGGGTTATGTGACCGAGGTGACTGGTGAGAGTGGGAGTGGCAAGACG
CAATTCCTTCTCACCCTTCTCCTGGCCGCCCAACTTCCTGCACCCCGTGG
TCTGGACAAGTGTGCCATATACATTTCCACAGAAGCTCCGTTATCGACGC
CACGGCTTTCGCAGCTCATTGAATTCCATCCTTATCTATCTTCCTTGTCG
CAAGCTCACACGCCCTCGCTGGAGAAGATATTGTCTATCAATGCCATGGA
TCTCGAGGCACAAGATCACATCCTCAACTACCAACTCCCTGTTGCAATCA
AGCGATATAATGTCGGATTGGTCGTCATTGACTCCATAACTGCAAATTAC
CGGGCAGAACATTCGTCCCATAATCTGTCGGGCTTGTCCACACGGTCTGG
CGAGCTTTCCAGATTAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAA
ATGTCGCAGTTGTAGTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCT
GGCAGGCACCCAACACTAATACGTTCGAATGGCGGTGTCATCTCATCTAT
TCCTTCAACGCAACAGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTG
TTACACCGTTGCCACGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTG
ACTCCTCATAACCCGATCCTTCAATCCTCTCCGTCTAGTCTTCCCTCGTC
ACCGTACACCACAGAGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCAT
ACCTGATTGGCAACCCTGTACGAAACGAGATCTTGAGTCTTCTACACCAG
CAGCGGTTCTTCACCGGGTGGGGTGACACGCTACAACCTACTATCTCAAG
CCTGTACCCAGCTTTCCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCT
TGGTTTGGTCTACCCAGATTGCATGTCGCATTGCACTGAAAAAGGAGACC
CGCTTTGTGGATTGGGAGGCCATTCTAGAGGACACGTTTGTCTCCAGCGA
GCAGCATTTGCTGCCTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATT
CACGAGTAGCAATGGAGAATGAAGAACAATCTAGGGCACACCACCCTGCA
GTCTGTGCACCACCGGACGAGACCGATGCAGTAGACGATAAGACGAATCT
CGATGTCCCGAATACTGTCCGTGATGATCATGCAGCAACCGGGCAATCCT
CACCATTGTCATCACAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAA
CTTGTATTTGCCCCCTGGACTGCCGGCCCAGTCACAGAGCAAGGCGAGAT
CCAACACGAGGCGGAGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTA
CAGAGGATTTTGACACCATCTAGATGGATCTTTTGTCGGTCCTTCCGGAC
TTCCCTACCAAGCCATATGCTCATATTCTCCCACCTCTTGAGCGGAGCCA
TATCAGCACGGTCGACTTGATCACTCTCGACACTCTCGAAGTCGCAAAGC
GTGCTCGTGTTCCTCCCGCCGATGTCCGCCGATTGTCCGCTCAGATCATA
AGAGCACTCCACAATGATGTCGGTTTCAAGGAGAACAGAGATCCCGATGC
TGATGAGCCGAGCTCCAGCCTCAGTGTTGATGTTCCTGTCTTCCCAGGCC
CGACGACCAAGCTAGATCTATTCCAGTGGAGTGCGATTAGTACACTCGAC
CCCACGTTAGACGCACTGCTTGATGGCGGCATACCGACGGGTTATGTGAC
CGAGGTGACTGGTGAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0008094DNA-dependent ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_102320ATCC64974_102320Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102320-T1ATCC64974_102320-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102320-T1.cdsATCC64974_102320-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102320-T1.exon2ATCC64974_102320-T1.exon2Aspergillus niger N402exon
ATCC64974_102320-T1.exon1ATCC64974_102320-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020588
DBxrefInterPro:IPR013632
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08423
DBxrefPFAM:PF06745
DBxrefPFAM:PF13481
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2070498..2072306 -
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