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ATCC64974_102480-T1, ATCC64974_102480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102480-T1
Unique NameATCC64974_102480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2131895..2133355+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102480-T1 ID=ATCC64974_102480-T1|Name=ATCC64974_102480-T1|organism=Aspergillus niger N402|type=mRNA|length=1461bp|location=Sequence derived from alignment at OGUI01000017.1:2131895..2133355+ (Aspergillus niger N402)
ATGAGGTGCATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCT
TGAGCATGACTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTG
GATATCCCAAGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGG
CAGGCAAATGCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGG
GATTGACACCGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTG
AGGTGTTGAGAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCA
GAAATTATCAATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTC
GACAGGCGAGGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGG
GATGTGATTTCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGA
CTCCGACAAAAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAG
AACTCTCCAACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAA
GTGATGAAAAAGCCATGGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTC
CGAAAAGCCCTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGG
CGAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACAT
TGATCTATCTCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCT
GCTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCG
ACACCGACTGCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTC
CAGACAATTCTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTC
TGGGACGCCAACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGG
CCAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTGA
GCCAGGGAAGCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGGA
CAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGGC
TTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACAG
TGCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCTG
GCTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTACA
GTTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACGG
TGGAGACGTATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACGT
GCGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAAG
TGATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTAT
GGGGTCTTTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:2131895..2133355+

>ATCC64974_102480-T1 ID=ATCC64974_102480-T1|Name=ATCC64974_102480-T1|organism=Aspergillus niger N402|type=CDS|length=1461bp|location=Sequence derived from alignment at OGUI01000017.1:2131895..2133355+ (Aspergillus niger N402)
ATGAGGTGCATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCT
TGAGCATGACTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTG
GATATCCCAAGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGG
CAGGCAAATGCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGG
GATTGACACCGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTG
AGGTGTTGAGAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCA
GAAATTATCAATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTC
GACAGGCGAGGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGG
GATGTGATTTCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGA
CTCCGACAAAAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAG
AACTCTCCAACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAA
GTGATGAAAAAGCCATGGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTC
CGAAAAGCCCTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGG
CGAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACAT
TGATCTATCTCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCT
GCTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCG
ACACCGACTGCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTC
CAGACAATTCTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTC
TGGGACGCCAACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGG
CCAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTGA
GCCAGGGAAGCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGGA
CAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGGC
TTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACAG
TGCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCTG
GCTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTACA
GTTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACGG
TGGAGACGTATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACGT
GCGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAAG
TGATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTAT
GGGGTCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_102480ATCC64974_102480Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102480-T1.exon1ATCC64974_102480-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102480-T1.cdsATCC64974_102480-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102480-T1ATCC64974_102480-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000171.7
NoteSMCOG1173:WD-40 repeat-containing protein
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR011659
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2131895..2133355 +
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