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ATCC64974_102830-T1, ATCC64974_102830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102830-T1
Unique NameATCC64974_102830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2229453..2231039-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102830-T1 ID=ATCC64974_102830-T1|Name=ATCC64974_102830-T1|organism=Aspergillus niger N402|type=mRNA|length=1587bp|location=Sequence derived from alignment at OGUI01000017.1:2229453..2231039- (Aspergillus niger N402)
ATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGC
CTCCCTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTCTTCCTCG
GCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAG
CCTCACGTCAACATTGGTAGGTTGCCATCATCATCTCTTATCCATCAATG
CAGTTACTCATCGCTATTTCATAGGTACCATTGGTCACGTCGATCACGGC
AAGGTTAGACCACAATTCCTTCCCCTCTCGCTGCGTTGATGTTTTCCCCG
ATATGGTCCGAAAACTTCTCACACGTTTCCTCTAGACCACCTTGACCGCT
GCCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCAGTTCCTTGAGTA
TGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGTATCACCATCT
CCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCACGTC
GACTGCCCCGGTCACGCCGATTACATCAAGAACATGATCACTGGTGCCGC
CAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGACGGTCAGATGT
ACGCTGAAACCCCAACAGAATAATCCCCTCGAGTATATGTGCTTACACTG
GCTATCAACAGGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGT
CGGTGTCCAGAAGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATG
ACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGC
AGCTACGGCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCT
CTGCGCCATTGAGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACG
CTCTCCTCGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTT
GACAAGCCTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCG
TGGTACCGTCGCTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATA
GCGAGGTTGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTC
ACCGACATTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGA
CAACTCCGGTCTCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTG
GTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATG
GTCTCCATGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTT
CGGTGTCCAGTACCGTCCCCAGCTGTTCATCCGCACTGCCGGTAAGTGAT
ATCGTTTTACACTCCGCTACGAGAGAACAGGTTCTGATTTTGTCTGCTGC
AGATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTA
TCATGCCCGGTGACAACGTCGAGATGATCGTCAAGACCCACCGCCCCGTC
GCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGTGGTCGCACTGT
TGCCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2229453..2231039-

>ATCC64974_102830-T1 ID=ATCC64974_102830-T1|Name=ATCC64974_102830-T1|organism=Aspergillus niger N402|type=CDS|length=6615bp|location=Sequence derived from alignment at OGUI01000017.1:2229453..2231039- (Aspergillus niger N402)
ATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTATC
ATGCCCGGTGACAACGTCGAGATGATCGTCAAGACCCACCGCCCCGTCGC
CGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGTGGTCGCACTGTTG
CCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAAGCCCCAGACTCGTGA
GCACTTGCTGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCG
TCAACAAGGTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAG
CTGGAAATGCGCGAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGAC
CCCCATCGTCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCG
ACATCGGTGCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGG
ATCCCCACTCCCCAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTGA
GGAAGTTTTCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTG
AGCGTGGTCTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACC
AACGAGGTCATCAAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGTC
CTGCACTGAGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTG
TCCGCCGTGAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGC
GCCAAGGCCAACAGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGGC
TGAGGGTGGTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGT
TCATCCGCACTGCCGACCACCTTGACCGCTGCCATCACCAAGCACCAGGC
CTCCAAGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTC
CTGAGGAGCGTAAGCGTGGTATCACCATCTCCTCTGCCCACATCGAGTAC
GCTACCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCACGCCGA
TTACATCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCA
TTGTCGTCGCCGCTTCCGACGGTCAGATGTACCATTGGTCACGTCGATCA
CGGCAAGATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTA
GCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTC
TTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCG
TACCAAGCCTCACGTCAACATTGATGAGGCTGCTGAGTTCAGCTTCCCCG
ACGGAGACCAGTCCCGCCGTATCATGCCCGGTGACAACGTCGAGATGATC
GTCAAGACCCACCGCCCCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACAT
CCGTGAGGGTGGTCGCACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGA
CCGAGTAAGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGG
TGTCCAGAAGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATGACC
CGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGC
TACGGCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTG
CGCCATTGAGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACGCTC
TCCTCGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGAC
AAGCCTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGG
TACCGTCGCTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATAGCG
AGGTTGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACC
GACATTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAA
CTCCGGTCTCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTGGTA
TGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTC
TCCATGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGG
TGTCCAGTACCGTCCCCAGCTGTTCATCCGCACTGCCGACCACCTTGACC
GCTGCCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCAGTTCCTTGA
GTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGTATCACCA
TCTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCAC
GTCGACTGCCCCGGTCACGCCGATTACATCAAGAACATGATCACTGGTGC
CGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGACGGTCAGA
TGTACCATTGGTCACGTCGATCACGGCAAGATGTCCAGCCTCGCCAGATC
TGCCAACCTCCTTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCG
CTGTCAACCCCATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGT
GGTATGGCAACCGCTTTCGAGCGTACCAAGCCTCACGTCAACATTGATGA
GGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTATCATGC
CCGGTGACAACGTCGAGATGATCGTCAAGACCCACCGCCCCGTCGCCGCC
GAGGCCGGTCAGCGCTTCAACATCCGTGAGGGTGGTCGCACTGTTGCCAC
TGGTCTGGTCACTCGTGTCCTGACCGAGTAAGCCCCAGACTCGTGAGCAC
TTGCTGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTCAA
CAAGGTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGG
AAATGCGCGAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGACCCCC
ATCGTCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGACAT
CGGTGCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCC
CCACTCCCCAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTGAGGAA
GTTTTCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAGCG
TGGTCTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACG
AGGTCATCAAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGTCCTGC
ACTGAGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTCCG
CCGTGAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCA
AGGCCAACAGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGGCTGAG
GGTGGTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTCAT
CCGCACTGCCGACCACCTTGACCGCTGCCATCACCAAGCACCAGGCCTCC
AAGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTCCTGA
GGAGCGTAAGCGTGGTATCACCATCTCCTCTGCCCACATCGAGTACGCTA
CCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCACGCCGATTAC
ATCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCATTGT
CGTCGCCGCTTCCGACGGTCAGATGTACCATTGGTCACGTCGATCACGGC
AAGATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAG
GGCCTCCCTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTCTTCC
TCGGCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACC
AAGCCTCACGTCAACATTGATGAGGCTGCTGAGTTCAGCTTCCCCGACGG
AGACCAGTCCCGCCGTATCATGCCCGGTGACAACGTCGAGATGATCGTCA
AGACCCACCGCCCCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACATCCGT
GAGGGTGGTCGCACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGACCGA
GTAAGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGGTGTC
CAGAAGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATGACCCGGA
GATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGCTACG
GCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTGCGCC
ATTGAGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACGCTCTCCT
CGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGACAAGC
CTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGGTACC
GTCGCTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATAGCGAGGT
TGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACCGACA
TTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAACTCC
GGTCTCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTGGTATGGT
CATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTCTCCA
TGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGGTGTC
CAGTACCGTCCCCAGCTGTTCATCCGCACTGCCGACCACCTTGACCGCTG
CCATCACCAAGCACCAGGCCTCCAAGGGTCTCGCTCAGTTCCTTGAGTAT
GGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGTATCACCATCTC
CTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCACGTCG
ACTGCCCCGGTCACGCCGATTACATCAAGAACATGATCACTGGTGCCGCC
AACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGACGGTCAGATGTA
CCATTGGTCACGTCGATCACGGCAAGATGTCCAGCCTCGCCAGATCTGCC
AACCTCCTTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGT
CAACCCCATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTA
TGGCAACCGCTTTCGAGCGTACCAAGCCTCACGTCAACATTGATGAGGCT
GCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTATCATGCCCGG
TGACAACGTCGAGATGATCGTCAAGACCCACCGCCCCGTCGCCGCCGAGG
CCGGTCAGCGCTTCAACATCCGTGAGGGTGGTCGCACTGTTGCCACTGGT
CTGGTCACTCGTGTCCTGACCGAGTAAGCCCCAGACTCGTGAGCACTTGC
TGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTCAACAAG
GTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAAT
GCGCGAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGACCCCCATCG
TCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGACATCGGT
GCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCCCCAC
TCCCCAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTGAGGAAGTTT
TCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAGCGTGGT
CTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACGAGGT
CATCAAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGTCCTGCACTG
AGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTCCGCCGT
GAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGC
CAACAGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGGCTGAGGGTG
GTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTCATCCGC
ACTGCCGACCACCTTGACCGCTGCCATCACCAAGCACCAGGCCTCCAAGG
GTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTCCTGAGGAG
CGTAAGCGTGGTATCACCATCTCCTCTGCCCACATCGAGTACGCTACCGA
TGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCACGCCGATTACATCA
AGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCATTGTCGTC
GCCGCTTCCGACGGTCAGATGTACCATTGGTCACGTCGATCACGGCAAGA
TGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGCC
TCCCTGCTGCGCCCCCGCGCTGTCAACCCCATCCAGCATGTCTTCCTCGG
CGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAGC
CTCACGTCAACATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TUF1ATCC64974_102830Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102830-T1ATCC64974_102830-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102830-T1.cdsATCC64974_102830-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102830-T1.exon5ATCC64974_102830-T1.exon5Aspergillus niger N402exon
ATCC64974_102830-T1.exon4ATCC64974_102830-T1.exon4Aspergillus niger N402exon
ATCC64974_102830-T1.exon3ATCC64974_102830-T1.exon3Aspergillus niger N402exon
ATCC64974_102830-T1.exon2ATCC64974_102830-T1.exon2Aspergillus niger N402exon
ATCC64974_102830-T1.exon1ATCC64974_102830-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041709
DBxrefInterPro:IPR033720
DBxrefInterPro:IPR031157
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR004541
DBxrefInterPro:IPR000795
DBxrefPFAM:PF01926
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation elongation factor Tu
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2229453..2231039 -
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