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ATCC64974_102870-T1, ATCC64974_102870-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102870-T1
Unique NameATCC64974_102870-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2236929..2237752+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102870-T1 ID=ATCC64974_102870-T1|Name=ATCC64974_102870-T1|organism=Aspergillus niger N402|type=mRNA|length=824bp|location=Sequence derived from alignment at OGUI01000017.1:2236929..2237752+ (Aspergillus niger N402)
ATGAGCACCATCCCAAGCGTCCACATCAACGACAAAAGCCCCATAGAGGA
GCACCACCAACACGACTCCACCTCCACCTCCCCAACAACCCGCAAATCCC
TGCATCAGAACATCTTCGGCAAGCTACGACCCCTCCCCTTCCAATACCAC
TGGACTGTCTGGTACGACCGTCACACCGACGCCCCAGCAGCATCAAGCGC
AACCGCAACAGCAGACTACGACTCCCGTCTATACGTCCTGCACGAGGATG
TCGCCGATATCGCCACCTTCTACCGCGTGTACAACAACTACCCCTGGGAC
AAGATCCGCCTGCGCGACACCGTCCATATCTTTCGCAAAGGCGTGAGACC
CGTCTGGGAAGACCCCGAGAATCGGAATGGGGGGTGCTGGCGCTTCCGTG
TTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATGAGATTGCTATTCTGTGT
ATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAGGGTTAGTCATCTTTTCC
TTCTTTCATCTGTTCTGTTTTTCTATGGTCTAGTAGATACACAACGGGTA
AGTTTGGGACATACACTAACAAGACAATGGGGGAAATATAGAACACGACC
ACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAACTCGCACCTCATCTCC
GTCTGGAACAAGCTCGGCTCCAACGACCGGTCTATCAAGGCTCTCGAGAA
AACCATTATTGATCGATTATCCCCTGAACTACGGCCCACGGGGACGGGGT
CCACTGCCTACTTTTACAAGCGACATGATGAGAATGATGGGTTTAAGGAG
GCTGTGGAGAGGAGTAAGACATGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2236929..2237752+

>ATCC64974_102870-T1 ID=ATCC64974_102870-T1|Name=ATCC64974_102870-T1|organism=Aspergillus niger N402|type=CDS|length=1434bp|location=Sequence derived from alignment at OGUI01000017.1:2236929..2237752+ (Aspergillus niger N402)
ATGAGCACCATCCCAAGCGTCCACATCAACGACAAAAGCCCCATAGAGGA
GCACCACCAACACGACTCCACCTCCACCTCCCCAACAACCCGCAAATCCC
TGCATCAGAACATCTTCGGCAAGCTACGACCCCTCCCCTTCCAATACCAC
TGGACTGTCTGGTACGACCGTCACACCGACGCCCCAGCAGCATCAAGCGC
AACCGCAACAGCAGACTACGACTCCCGTCTATACGTCCTGCACGAGGATG
TCGCCGATATCGCCACCTTCTACCGCGTGTACAACAACTACCCCTGGGAC
AAGATCCGCCTGCGCGACACCGTCCATATCTTTCGCAAAGGCGTGAGACC
CGTCTGGGAAGACCCCGAGAATCGGAATGGGGGGTGCTGGCGCTTCCGTG
TTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATGAGATTGCTATTCTGTGT
ATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAGGAACACGACCACGTCCT
CGGAGTCTCAACCTCCGTCCGCTTCAACTCGCACCTCATCTCCGTCTGGA
ACAAGCTCGGCTCCAACGACCGGTCTATCAAGGCTCTCGAGAAAACCATT
ATTGATCGATTATCCCCTGAACTACGGCCCACGGGGACGGGGTCCACTGC
CTACTTTTACAAGCGACATGATGAGAATGATGGGTTTAAGGAGGCTGTGG
AGAGGAGTAAGACATGAATGAGCACCATCCCAAGCGTCCACATCAACGAC
AAAAGCCCCATAGAGGAGCACCACCAACACGACTCCACCTCCACCTCCCC
AACAACCCGCAAATCCCTGCATCAGAACATCTTCGGCAAGCTACGACCCC
TCCCCTTCCAATACCACTGGACTGTCTGGTACGACCGTCACACCGACGCC
CCAGCAGCATCAAGCGCAACCGCAACAGCAGACTACGACTCCCGTCTATA
CGTCCTGCACGAGGATGTCGCCGATATCGCCACCTTCTACCGCGTGTACA
ACAACTACCCCTGGGACAAGATCCGCCTGCGCGACACCGTCCATATCTTT
CGCAAAGGCGTGAGACCCGTCTGGGAAGACCCCGAGAATCGGAATGGGGG
GTGCTGGCGCTTCCGTGTTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATG
AGATTGCTATTCTGTGTATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAG
GAACACGACCACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAACTCGCA
CCTCATCTCCGTCTGGAACAAGCTCGGCTCCAACGACCGGTCTATCAAGG
CTCTCGAGAAAACCATTATTGATCGATTATCCCCTGAACTACGGCCCACG
GGGACGGGGTCCACTGCCTACTTTTACAAGCGACATGATGAGAATGATGG
GTTTAAGGAGGCTGTGGAGAGGAGTAAGACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_102870ATCC64974_102870Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102870-T1.exon1ATCC64974_102870-T1.exon1Aspergillus niger N402exon
ATCC64974_102870-T1.exon2ATCC64974_102870-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102870-T1.cdsATCC64974_102870-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102870-T1ATCC64974_102870-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR023398
DBxrefInterPro:IPR001040
DBxrefPFAM:PF01652
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2236929..2237752 +
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