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ATCC64974_102910-T1, ATCC64974_102910-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_102910-T1
Unique NameATCC64974_102910-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2244567..2245242-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_102910-T1 ID=ATCC64974_102910-T1|Name=ATCC64974_102910-T1|organism=Aspergillus niger N402|type=mRNA|length=676bp|location=Sequence derived from alignment at OGUI01000017.1:2244567..2245242- (Aspergillus niger N402)
ATGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTC
GCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCC
CGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTGTGAGCAACCC
CCTTGATCTCAGTCGCATGAGGGCATTCGGACCTCCTATATTCAATGCAA
AGCTAATGGTTGACCCCCGACAGCTCAATTGAAGAAGTACACCGAGTCGC
ACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGGTTCGTCTACCACA
GCCCTTTCCCGGCCAAACAACACTCAATTAATTACTAACGCTTTCTTCTA
TCTCTGCAGCCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGT
GACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGG
TGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTT
CTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAAT
GCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGAT
CGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTT
ACAAGGCTACTATCGATGAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2244567..2245242-

>ATCC64974_102910-T1 ID=ATCC64974_102910-T1|Name=ATCC64974_102910-T1|organism=Aspergillus niger N402|type=CDS|length=1557bp|location=Sequence derived from alignment at OGUI01000017.1:2244567..2245242- (Aspergillus niger N402)
CCAAGATCGGCATTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTGTG
TTCGTTGAGCTCCCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCCGT
CGGTGCTGTTGAGTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGTCT
CGGGAACTGTTACGCAGGGCAATACTGTGCTGGATGACAATGCCAAGTTC
ATCAACCAGAGCCCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTGAA
CGATGTCGCGGAGTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGCTA
CTATCGATGAGGAGTAACTCAATTGAAGAAGTACACCGAGTCGCACGAGT
GGATCGAGCTCGCCGCCGACGGCAAGACTGATGTCTTTCGCCGCCCGATC
CCTCCGCCCCTTCGCTTCTCGCGTCCTGTCGCAGAAGCTCCCCCTCTCTT
CCGTCTGCAGGGCCGCACCCGCCAGTTTCCCGCGGGGAAGTGTCCGGAGC
TTCTCCCAGAGCCCACTTTCCAAGATCGGCATTACTGAATACGCTGCCAA
GTCCCTTGGTGACGTTGTGTTCGTTGAGCTCCCCGAGGTTAATCTGGAGG
TTAGCGCCGGTGAGCCCGTCGGTGCTGTTGAGTCCGTCAAGTCCGCTTCG
GACGTCCTTTCTCCTGTCTCGGGAACTGTTACGCAGGGCAATACTGTGCT
GGATGACAATGCCAAGTTCATCAACCAGAGCCCCGAGGGTGACGCCTGGA
TTGCGGAGATCGAGGTGAACGATGTCGCGGAGTTGGACGCACTTTTGGAC
GAGGCTGCTTACAAGGCTACTATCGATGAGGAGTAACTCAATTGAAGAAG
TACACCGAGTCGCACGAGTGGATCGAGCTCGCCGCCGACGGCAAGACTGA
TGTCTTTCGCCGCCCGATCCCTCCGCCCCTTCGCTTCTCGCGTCCTGTCG
CAGAAGCTCCCCCTCTCTTCCGTCTGCAGGGCCGCACCCGCCAGTTTCCC
GCGGGGAAGTGTCCGGAGCTTCTCCCAGAGCCCACTTTCCAAGATCGGCA
TTACTGAATACGCTGCCAAGTCCCTTGGTGACGTTGTGTTCGTTGAGCTC
CCCGAGGTTAATCTGGAGGTTAGCGCCGGTGAGCCCGTCGGTGCTGTTGA
GTCCGTCAAGTCCGCTTCGGACGTCCTTTCTCCTGTCTCGGGAACTGTTA
CGCAGGGCAATACTGTGCTGGATGACAATGCCAAGTTCATCAACCAGAGC
CCCGAGGGTGACGCCTGGATTGCGGAGATCGAGGTGAACGATGTCGCGGA
GTTGGACGCACTTTTGGACGAGGCTGCTTACAAGGCTACTATCGATGAGG
AGTAACTCAATTGAAGAAGTACACCGAGTCGCACGAGTGGATCGAGCTCG
CCGCCGACGGCAAGACTGATGTCTTTCGCCGCCCGATCCCTCCGCCCCTT
CGCTTCTCGCGTCCTGTCGCAGAAGCTCCCCCTCTCTTCCGTCTGCAGGG
CCGCACCCGCCAGTTTCCCGCGGGGAAGTGTCCGGAGCTTCTCCCAGAGC
CCACTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005960glycine cleavage complex
Vocabulary: Biological Process
TermDefinition
GO:0019464glycine decarboxylation via glycine cleavage system
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_102910ATCC64974_102910Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102910-T1ATCC64974_102910-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102910-T1.cdsATCC64974_102910-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_102910-T1.exon3ATCC64974_102910-T1.exon3Aspergillus niger N402exon
ATCC64974_102910-T1.exon2ATCC64974_102910-T1.exon2Aspergillus niger N402exon
ATCC64974_102910-T1.exon1ATCC64974_102910-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264SUZ
DBxrefInterPro:IPR011053
DBxrefInterPro:IPR000089
DBxrefInterPro:IPR002930
DBxrefInterPro:IPR003016
DBxrefInterPro:IPR017453
DBxrefInterPro:IPR033753
DBxrefPFAM:PF01597
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2244567..2245242 -
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