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ATCC64974_103060-T1, ATCC64974_103060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103060-T1
Unique NameATCC64974_103060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2312845..2313895+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103060-T1 ID=ATCC64974_103060-T1|Name=ATCC64974_103060-T1|organism=Aspergillus niger N402|type=mRNA|length=1051bp|location=Sequence derived from alignment at OGUI01000017.1:2312845..2313895+ (Aspergillus niger N402)
ATGCCTCCCCGGCTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGC
CACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCC
ACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAG
GGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAA
GGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGG
TCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGT
GAGAGGGGGTTTAATAATGTGTATGTTTTCCCCCTTCCCCTCCGCCCTTG
TCATCTTTGACACGGAGAGAAAGATGATCTTGAATAAATTCTAACGAGAA
TCAATGGGATCGGATAGTCACTCCATCGACCTCGCCCCCGTGAACCTCGA
CCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCA
TCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAA
GGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCC
CGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTT
CGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACG
AGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCA
TCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGG
CGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAG
ATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGA
GTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGC
CGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCT
GCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTG
A
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Coding sequence (CDS) from alignment at OGUI01000017.1:2312845..2313895+

>ATCC64974_103060-T1 ID=ATCC64974_103060-T1|Name=ATCC64974_103060-T1|organism=Aspergillus niger N402|type=CDS|length=1908bp|location=Sequence derived from alignment at OGUI01000017.1:2312845..2313895+ (Aspergillus niger N402)
ATGCCTCCCCGGCTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGC
CACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCC
ACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAG
GGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAA
GGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGG
TCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGT
GAGAGGGGGTTTAATAATGTTCACTCCATCGACCTCGCCCCCGTGAACCT
CGACCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACCCGCC
CCATCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCAAA
GAAGGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAGGT
TCCCGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAGGG
CTTCGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACC
ACGAGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAGAT
GCATCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGT
TGGCGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAG
GAGATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGATAT
TGAGTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCTGA
AGCCGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAG
TCTGCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTG
GTGAATGCCTCCCCGGCTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAA
TGGCCACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCC
GTCCACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATAC
CCAGGGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCG
GCAAGGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGA
AAGGTCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCA
TGGTGAGAGGGGGTTTAATAATGTTCACTCCATCGACCTCGCCCCCGTGA
ACCTCGACCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACC
CGCCCCATCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGAC
CAAAGAAGGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACG
AGGTTCCCGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCG
AGGGCTTCGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGT
CACCACGAGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCG
AGATGCATCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAG
GCGTTGGCGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTAT
GAAGGAGATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGG
ATATTGAGTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTG
CTGAAGCCGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCG
GAAGTCTGCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGC
TTTGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103060ATCC64974_103060Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103060-T1.exon1ATCC64974_103060-T1.exon1Aspergillus niger N402exon
ATCC64974_103060-T1.exon2ATCC64974_103060-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103060-T1.cdsATCC64974_103060-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103060-T1ATCC64974_103060-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264A2D
DBxrefInterPro:IPR036227
DBxrefInterPro:IPR030878
DBxrefInterPro:IPR005749
DBxrefInterPro:IPR021131
DBxrefPFAM:PF00828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2312845..2313895 +
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