You are here

Home

ATCC64974_103200-T1, ATCC64974_103200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103200-T1
Unique NameATCC64974_103200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2352524..2353757-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103200-T1 ID=ATCC64974_103200-T1|Name=ATCC64974_103200-T1|organism=Aspergillus niger N402|type=mRNA|length=1234bp|location=Sequence derived from alignment at OGUI01000017.1:2352524..2353757- (Aspergillus niger N402)
ATGTCACGCTCTCGTCTGCCACCGACCCCTGCCATGTCGGGCGAGTTCAT
AGTCAAAGACAATGCATCGGTGGATGCGTCGGATCCATTTGCACTGCCTC
CAGCGGCCATTAGTCCATCCAAGATGCAAGCTGCTAGCAGGAGACCATCC
AAAACTGATCCATCCGCTTCCTTCCCAGCATCTCCAGCATCGCCGGATCT
CGCACTGGGTATCATGGCGAATTCCCCGCGTCAGACTGGTGTCAAGAGAC
CTCTCGAAGACTTTAACCTTCCACCGCCCCCCACACGCACTCGCAAAATC
ATTCAGATGAAGCCCAAGACCCAAAGCCCACCAAAGCCGACCGCACCAGC
CAGCAAAGCCTCTGCAAAAGATAATGGCAAGACACCAGCAAACAATGGAG
CCTCAGCCAACTCCAAGAAGAAACAACCCAGCGCAACTAGTGCAGCGGGC
CGAAAAATTGCTAGGAAAACAGCTCACAGCCTGATCGAACGGCGGCGGAG
ATCTAAAATGAATGAAGAATTTGGAACTCTGAAAGACATGATCCCGGCGT
GCAAAGGACAGGACATGCATAAGCTCGCCATTTTACAGGTTTGTCCCGAC
TTCAATCTTCGACGACCCCTGTCCTTGAGCCGGTCGCTAACCGTTCCCGA
TGGCCTAGGCAAGCATTGATTACGTCAATTACCTAGAACAATGTATACTC
GATCTGAAAACTGCCGGTAATCGACACGCAATGGCCTCGCCGCGAATGCC
TCCCGCTCCTCCTTCACCAACATCTCCGGAGGCTCTGGCAGAAGAATCGG
GCCTGTCCTCGGCTTCCGTGTCTCCGGAACTACCTCCAACTGATGCTGCG
GCGGATGCAATCTCCCCGGCGTTCTCTCCCCGAAGTGGTGGTCCTATCGG
GACGGCGCCCGATTTTGCGTCCTCCATCACGCCAAGCCCGGCACTGGGTC
CAACCCACCCATCCGACAATCCGTCGCGTTCTGAGCGTAGCTCATGGGCT
GTGTCTTCTTCCAGCACCTCCCCAGTAATGCAATCTCGGTATTCCATCGC
ATCTTCTGCCGATGTGGACCACGAAGCATCCGCAGCCCTACTAATGCTGA
ACCGGGACTGCCGGGGCTCTGTCGGCTCGGTCCACGACGTGCCCACCAAT
TCCCTCACCCGGCATGGGAATCCCCACACCCAGGACCCACAAAGGAAGAT
CGGGATGAGCGTTAAAGACTTGCTTATTTCCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2352524..2353757-

>ATCC64974_103200-T1 ID=ATCC64974_103200-T1|Name=ATCC64974_103200-T1|organism=Aspergillus niger N402|type=CDS|length=2328bp|location=Sequence derived from alignment at OGUI01000017.1:2352524..2353757- (Aspergillus niger N402)
GCAAGCATTGATTACGTCAATTACCTAGAACAATGTATACTCGATCTGAA
AACTGCCGGTAATCGACACGCAATGGCCTCGCCGCGAATGCCTCCCGCTC
CTCCTTCACCAACATCTCCGGAGGCTCTGGCAGAAGAATCGGGCCTGTCC
TCGGCTTCCGTGTCTCCGGAACTACCTCCAACTGATGCTGCGGCGGATGC
AATCTCCCCGGCGTTCTCTCCCCGAAGTGGTGGTCCTATCGGGACGGCGC
CCGATTTTGCGTCCTCCATCACGCCAAGCCCGGCACTGGGTCCAACCCAC
CCATCCGACAATCCGTCGCGTTCTGAGCGTAGCTCATGGGCTGTGTCTTC
TTCCAGCACCTCCCCAGTAATGCAATCTCGGTATTCCATCGCATCTTCTG
CCGATGTGGACCACGAAGCATCCGCAGCCCTACTAATGCTGAACCGGGAC
TGCCGGGGCTCTGTCGGCTCGGTCCACGACGTGCCCACCAATTCCCTCAC
CCGGCATGGGAATCCCCACACCCAGGACCCACAAAGGAAGATCGGGATGA
GCGTTAAAGACTTGCTTATTTCCTAAATGTCACGCTCTCGTCTGCCACCG
ACCCCTGCCATGTCGGGCGAGTTCATAGTCAAAGACAATGCATCGGTGGA
TGCGTCGGATCCATTTGCACTGCCTCCAGCGGCCATTAGTCCATCCAAGA
TGCAAGCTGCTAGCAGGAGACCATCCAAAACTGATCCATCCGCTTCCTTC
CCAGCATCTCCAGCATCGCCGGATCTCGCACTGGGTATCATGGCGAATTC
CCCGCGTCAGACTGGTGTCAAGAGACCTCTCGAAGACTTTAACCTTCCAC
CGCCCCCCACACGCACTCGCAAAATCATTCAGATGAAGCCCAAGACCCAA
AGCCCACCAAAGCCGACCGCACCAGCCAGCAAAGCCTCTGCAAAAGATAA
TGGCAAGACACCAGCAAACAATGGAGCCTCAGCCAACTCCAAGAAGAAAC
AACCCAGCGCAACTAGTGCAGCGGGCCGAAAAATTGCTAGGAAAACAGCT
CACAGCCTGATCGAACGGCGGCGGAGATCTAAAATGAATGAAGAATTTGG
AACTCTGAAAGACATGATCCCGGCGTGCAAAGGACAGGACATGCATAAGC
TCGCCATTTTACAGGCAAGCATTGATTACGTCAATTACCTAGAACAATGT
ATACTCGATCTGAAAACTGCCGGTAATCGACACGCAATGGCCTCGCCGCG
AATGCCTCCCGCTCCTCCTTCACCAACATCTCCGGAGGCTCTGGCAGAAG
AATCGGGCCTGTCCTCGGCTTCCGTGTCTCCGGAACTACCTCCAACTGAT
GCTGCGGCGGATGCAATCTCCCCGGCGTTCTCTCCCCGAAGTGGTGGTCC
TATCGGGACGGCGCCCGATTTTGCGTCCTCCATCACGCCAAGCCCGGCAC
TGGGTCCAACCCACCCATCCGACAATCCGTCGCGTTCTGAGCGTAGCTCA
TGGGCTGTGTCTTCTTCCAGCACCTCCCCAGTAATGCAATCTCGGTATTC
CATCGCATCTTCTGCCGATGTGGACCACGAAGCATCCGCAGCCCTACTAA
TGCTGAACCGGGACTGCCGGGGCTCTGTCGGCTCGGTCCACGACGTGCCC
ACCAATTCCCTCACCCGGCATGGGAATCCCCACACCCAGGACCCACAAAG
GAAGATCGGGATGAGCGTTAAAGACTTGCTTATTTCCTAAATGTCACGCT
CTCGTCTGCCACCGACCCCTGCCATGTCGGGCGAGTTCATAGTCAAAGAC
AATGCATCGGTGGATGCGTCGGATCCATTTGCACTGCCTCCAGCGGCCAT
TAGTCCATCCAAGATGCAAGCTGCTAGCAGGAGACCATCCAAAACTGATC
CATCCGCTTCCTTCCCAGCATCTCCAGCATCGCCGGATCTCGCACTGGGT
ATCATGGCGAATTCCCCGCGTCAGACTGGTGTCAAGAGACCTCTCGAAGA
CTTTAACCTTCCACCGCCCCCCACACGCACTCGCAAAATCATTCAGATGA
AGCCCAAGACCCAAAGCCCACCAAAGCCGACCGCACCAGCCAGCAAAGCC
TCTGCAAAAGATAATGGCAAGACACCAGCAAACAATGGAGCCTCAGCCAA
CTCCAAGAAGAAACAACCCAGCGCAACTAGTGCAGCGGGCCGAAAAATTG
CTAGGAAAACAGCTCACAGCCTGATCGAACGGCGGCGGAGATCTAAAATG
AATGAAGAATTTGGAACTCTGAAAGACATGATCCCGGCGTGCAAAGGACA
GGACATGCATAAGCTCGCCATTTTACAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103200ATCC64974_103200Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103200-T1ATCC64974_103200-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103200-T1.cdsATCC64974_103200-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103200-T1.exon2ATCC64974_103200-T1.exon2Aspergillus niger N402exon
ATCC64974_103200-T1.exon1ATCC64974_103200-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2352524..2353757 -
Powered by Drupal