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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:2379784..2380496+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_103300-T1 ID=ATCC64974_103300-T1|Name=ATCC64974_103300-T1|organism=Aspergillus niger N402|type=mRNA|length=713bp|location=Sequence derived from alignment at OGUI01000017.1:2379784..2380496+ (Aspergillus niger N402)
ATGCTTTTCAAATCCACCTTCCTCGCAACTGCCACGGCTCTGTGCCTCTC
CGCCACGGCTACAGCTCAGGGCGCCAGCACCAATGCCCCCGTCGTCACAG
ACAATGATGATGTCCTCTACTACGCCCAGCTCCAGCCCAAGGATAACACC
ACAGTCCGCGGGTCTGTAACCATCTTCCCTAAGCCCGATAGTGTGGGTGT
CCTTGTTTCGGCGCAGTTCTGGGGCATCCCCGACAATGACCAGCAGTTGG
GTACGCCTCCCTTTCCTCCCGCTCCTTCAATATCTATCCCATCATATGGG
CTTGTGTTTAGAGTTTCCTACGAATCCGAACCCAAACTCAAACTTTGAGT
TAATAACAAACCTACACCTCAATACTAACCTCTTTATGAAATTGATCAGT
CTACCACATCCACCAAAAGCCAGTCCCTCAGGACGGAAACTGCTACAGCA
CCGGTGCACACCTGGACCCTTACGGCCGGGGCGATGCCACCCCCTGCGAC
ATCAACGCGCCACAGACCTGTCAAGTTGGCGACCTCAGTGGCAAGCATGG
ACCGATCTGGGCGCCCGACAACGAGGTATTCTCCACCACGTATACGGACT
GGTTCCTTTCCAATGTGGAGGGGGAGCCTGCCTTCTTTGGAAACCTCTCG
TTGGTCGTGCATGCAGCGGATAACTCGCGCCTGGCGTGTGGAAACTTCGT
GCAGCTGAAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:2379784..2380496+ >ATCC64974_103300-T1 ID=ATCC64974_103300-T1|Name=ATCC64974_103300-T1|organism=Aspergillus niger N402|type=CDS|length=1128bp|location=Sequence derived from alignment at OGUI01000017.1:2379784..2380496+ (Aspergillus niger N402)
ATGCTTTTCAAATCCACCTTCCTCGCAACTGCCACGGCTCTGTGCCTCTC
CGCCACGGCTACAGCTCAGGGCGCCAGCACCAATGCCCCCGTCGTCACAG
ACAATGATGATGTCCTCTACTACGCCCAGCTCCAGCCCAAGGATAACACC
ACAGTCCGCGGGTCTGTAACCATCTTCCCTAAGCCCGATAGTGTGGGTGT
CCTTGTTTCGGCGCAGTTCTGGGGCATCCCCGACAATGACCAGCAGTTGG
TCTACCACATCCACCAAAAGCCAGTCCCTCAGGACGGAAACTGCTACAGC
ACCGGTGCACACCTGGACCCTTACGGCCGGGGCGATGCCACCCCCTGCGA
CATCAACGCGCCACAGACCTGTCAAGTTGGCGACCTCAGTGGCAAGCATG
GACCGATCTGGGCGCCCGACAACGAGGTATTCTCCACCACGTATACGGAC
TGGTTCCTTTCCAATGTGGAGGGGGAGCCTGCCTTCTTTGGAAACCTCTC
GTTGGTCGTGCATGCAGCGGATAACTCGCGCCTGGCGTGTGGAAACTTCG
TGCAGCTGAAGTAAATGCTTTTCAAATCCACCTTCCTCGCAACTGCCACG
GCTCTGTGCCTCTCCGCCACGGCTACAGCTCAGGGCGCCAGCACCAATGC
CCCCGTCGTCACAGACAATGATGATGTCCTCTACTACGCCCAGCTCCAGC
CCAAGGATAACACCACAGTCCGCGGGTCTGTAACCATCTTCCCTAAGCCC
GATAGTGTGGGTGTCCTTGTTTCGGCGCAGTTCTGGGGCATCCCCGACAA
TGACCAGCAGTTGGTCTACCACATCCACCAAAAGCCAGTCCCTCAGGACG
GAAACTGCTACAGCACCGGTGCACACCTGGACCCTTACGGCCGGGGCGAT
GCCACCCCCTGCGACATCAACGCGCCACAGACCTGTCAAGTTGGCGACCT
CAGTGGCAAGCATGGACCGATCTGGGCGCCCGACAACGAGGTATTCTCCA
CCACGTATACGGACTGGTTCCTTTCCAATGTGGAGGGGGAGCCTGCCTTC
TTTGGAAACCTCTCGTTGGTCGTGCATGCAGCGGATAACTCGCGCCTGGC
GTGTGGAAACTTCGTGCAGCTGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006801 | superoxide metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_103300-T1 | ATCC64974_103300-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| DBxref | InterPro:IPR001424 |
| DBxref | InterPro:IPR036423 |
| DBxref | PFAM:PF00080 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:2379784..2380496 + |
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