You are here

Home

ATCC64974_103650-T1, ATCC64974_103650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103650-T1
Unique NameATCC64974_103650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2492484..2493979-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103650-T1 ID=ATCC64974_103650-T1|Name=ATCC64974_103650-T1|organism=Aspergillus niger N402|type=mRNA|length=1496bp|location=Sequence derived from alignment at OGUI01000017.1:2492484..2493979- (Aspergillus niger N402)
ATGGTAAGTTACCTTGCTATTTGATGCCAATTGAGTTTTTCCCGGTTGAG
CGACGATCGTCTGACATCCTCGTGTTTCCCCTACAGGTATCATCTCTACG
ACGTCTCGCAGCGGACCATGCAGCGTTGCACGAAGAACTTCCTCCCAACT
ATCTCTTTCCCTCCGACGATGCCTCTGCCGGGGACGACTTGACACAGCTC
ACCACTCTCCTGGCCGGGCCACAGGGTACACCATACTCGCAGGGCCTATG
GCGATTGCATCTGAAGATGCCGGAGGACTACCCCAAGAGCCCACCAAAGG
CAACATTCAGGACAAGGATATGGCATCCAAATGTGGAGGAATCGACGGGT
GCGGTCTGCGTGGATACACTGAAGCGGGACTGGAAGCCCAACTTGACCTT
GAAGGACGTTTTGATTGTATGTATCCCTACCATATACAGTCGACGATTGC
GGATCTTCATCTGACATGTTGTTTAGACAATCTCTTGCCTCCTCATATAT
CCCAACCCAGACTCCGCACTGAATTCCGCAGCCGGCGCACTTCTCCAAGA
GAACTACGATGCATTCGCCCGCCAAGCGAAACTAATGACCTCCATCCACG
CTCCCGTTCCATCAGAGTTAGCGTCAGCAGTATCCGAGGCGAAAACAAGA
GGCGAAGACGCCGACACAGTCATCCCCGAAGAGCAAATACCGTCCCGCTC
ACTACGACCACGGAAGGGAGCCAGAATCGCCTCAGTCACTATGAAAAAGC
GAACTACTCGGAGAAGCGCTGAAGAGAGCTCAAGCTCACGAGCATATTCG
CATCAGCCCAGCACACCTATTGAACAAGAAGCACAGCAACCAGAGGAACC
TCATGACACCCTTACCCTTGATACGACCGTCTCCGACAGTGAATCAGAAA
CATCTACCAACGCCAGTAAAGAGAACGACCCTTCCCTATCTCCTTCCCCA
GTCCGACTCGCACCACCTAGCATCCGCAAGAACGCTTTCGGGAAACGCCC
CCTTTCCGTCCTAACCATGCCCATGGACGTGGACGATCCCTTCGCCATGG
GCACAGAAGAAACAACAATAGACGGCATGTCCGCATCCGAGAAGAACATC
GCAGCAAACCACCCTAGTGACCTCCCAGAACGCGGCCACTCCCCACAGAG
AAAGTCCCCGAAGCTGTCCGTACTCGACAAAGGCATCAACTCATCAGGCC
GGATACGCGAAGATGTCCAGATCTTCGAAGACGATCCCGATCCTGCCGAG
CTAGGCTTCATCAGGCGAGCCAGCGGCGACGGCAAGGAAAATCCCCGAGC
CTTAGCCGGATTGAAAGATACCGACCCCGCCATCCGGACGTCTAATCCAA
GCAATCCCCCAACGATCCTTGCCCCCTCAGCATCGAGATCCGTCTCCTCC
GGCTCGGGCTTATCAAAACCAATCTTTGGATCACGCAAAGTCTCGTCGTC
GAATGGCAAGAAAGCCAAACCTCGGATCGGCATTCGCAGACTCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2492484..2493979-

>ATCC64974_103650-T1 ID=ATCC64974_103650-T1|Name=ATCC64974_103650-T1|organism=Aspergillus niger N402|type=CDS|length=4059bp|location=Sequence derived from alignment at OGUI01000017.1:2492484..2493979- (Aspergillus niger N402)
ACAATCTCTTGCCTCCTCATATATCCCAACCCAGACTCCGCACTGAATTC
CGCAGCCGGCGCACTTCTCCAAGAGAACTACGATGCATTCGCCCGCCAAG
CGAAACTAATGACCTCCATCCACGCTCCCGTTCCATCAGAGTTAGCGTCA
GCAGTATCCGAGGCGAAAACAAGAGGCGAAGACGCCGACACAGTCATCCC
CGAAGAGCAAATACCGTCCCGCTCACTACGACCACGGAAGGGAGCCAGAA
TCGCCTCAGTCACTATGAAAAAGCGAACTACTCGGAGAAGCGCTGAAGAG
AGCTCAAGCTCACGAGCATATTCGCATCAGCCCAGCACACCTATTGAACA
AGAAGCACAGCAACCAGAGGAACCTCATGACACCCTTACCCTTGATACGA
CCGTCTCCGACAGTGAATCAGAAACATCTACCAACGCCAGTAAAGAGAAC
GACCCTTCCCTATCTCCTTCCCCAGTCCGACTCGCACCACCTAGCATCCG
CAAGAACGCTTTCGGGAAACGCCCCCTTTCCGTCCTAACCATGCCCATGG
ACGTGGACGATCCCTTCGCCATGGGCACAGAAGAAACAACAATAGACGGC
ATGTCCGCATCCGAGAAGAACATCGCAGCAAACCACCCTAGTGACCTCCC
AGAACGCGGCCACTCCCCACAGAGAAAGTCCCCGAAGCTGTCCGTACTCG
ACAAAGGCATCAACTCATCAGGCCGGATACGCGAAGATGTCCAGATCTTC
GAAGACGATCCCGATCCTGCCGAGCTAGGCTTCATCAGGCGAGCCAGCGG
CGACGGCAAGGAAAATCCCCGAGCCTTAGCCGGATTGAAAGATACCGACC
CCGCCATCCGGACGTCTAATCCAAGCAATCCCCCAACGATCCTTGCCCCC
TCAGCATCGAGATCCGTCTCCTCCGGCTCGGGCTTATCAAAACCAATCTT
TGGATCACGCAAAGTCTCGTCGTCGAATGGCAAGAAAGCCAAACCTCGGA
TCGGCATTCGCAGACTCTGAGTATCATCTCTACGACGTCTCGCAGCGGAC
CATGCAGCGTTGCACGAAGAACTTCCTCCCAACTATCTCTTTCCCTCCGA
CGATGCCTCTGCCGGGGACGACTTGACACAGCTCACCACTCTCCTGGCCG
GGCCACAGGGTACACCATACTCGCAGGGCCTATGGCGATTGCATCTGAAG
ATGCCGGAGGACTACCCCAAGAGCCCACCAAAGGCAACATTCAGGACAAG
GATATGGCATCCAAATGTGGAGGAATCGACGGGTGCGGTCTGCGTGGATA
CACTGAAGCGGGACTGGAAGCCCAACTTGACCTTGAAGGACGTTTTGATT
ATGACAATCTCTTGCCTCCTCATATATCCCAACCCAGACTCCGCACTGAA
TTCCGCAGCCGGCGCACTTCTCCAAGAGAACTACGATGCATTCGCCCGCC
AAGCGAAACTAATGACCTCCATCCACGCTCCCGTTCCATCAGAGTTAGCG
TCAGCAGTATCCGAGGCGAAAACAAGAGGCGAAGACGCCGACACAGTCAT
CCCCGAAGAGCAAATACCGTCCCGCTCACTACGACCACGGAAGGGAGCCA
GAATCGCCTCAGTCACTATGAAAAAGCGAACTACTCGGAGAAGCGCTGAA
GAGAGCTCAAGCTCACGAGCATATTCGCATCAGCCCAGCACACCTATTGA
ACAAGAAGCACAGCAACCAGAGGAACCTCATGACACCCTTACCCTTGATA
CGACCGTCTCCGACAGTGAATCAGAAACATCTACCAACGCCAGTAAAGAG
AACGACCCTTCCCTATCTCCTTCCCCAGTCCGACTCGCACCACCTAGCAT
CCGCAAGAACGCTTTCGGGAAACGCCCCCTTTCCGTCCTAACCATGCCCA
TGGACGTGGACGATCCCTTCGCCATGGGCACAGAAGAAACAACAATAGAC
GGCATGTCCGCATCCGAGAAGAACATCGCAGCAAACCACCCTAGTGACCT
CCCAGAACGCGGCCACTCCCCACAGAGAAAGTCCCCGAAGCTGTCCGTAC
TCGACAAAGGCATCAACTCATCAGGCCGGATACGCGAAGATGTCCAGATC
TTCGAAGACGATCCCGATCCTGCCGAGCTAGGCTTCATCAGGCGAGCCAG
CGGCGACGGCAAGGAAAATCCCCGAGCCTTAGCCGGATTGAAAGATACCG
ACCCCGCCATCCGGACGTCTAATCCAAGCAATCCCCCAACGATCCTTGCC
CCCTCAGCATCGAGATCCGTCTCCTCCGGCTCGGGCTTATCAAAACCAAT
CTTTGGATCACGCAAAGTCTCGTCGTCGAATGGCAAGAAAGCCAAACCTC
GGATCGGCATTCGCAGACTCTGAGTATCATCTCTACGACGTCTCGCAGCG
GACCATGCAGCGTTGCACGAAGAACTTCCTCCCAACTATCTCTTTCCCTC
CGACGATGCCTCTGCCGGGGACGACTTGACACAGCTCACCACTCTCCTGG
CCGGGCCACAGGGTACACCATACTCGCAGGGCCTATGGCGATTGCATCTG
AAGATGCCGGAGGACTACCCCAAGAGCCCACCAAAGGCAACATTCAGGAC
AAGGATATGGCATCCAAATGTGGAGGAATCGACGGGTGCGGTCTGCGTGG
ATACACTGAAGCGGGACTGGAAGCCCAACTTGACCTTGAAGGACGTTTTG
ATTATGACAATCTCTTGCCTCCTCATATATCCCAACCCAGACTCCGCACT
GAATTCCGCAGCCGGCGCACTTCTCCAAGAGAACTACGATGCATTCGCCC
GCCAAGCGAAACTAATGACCTCCATCCACGCTCCCGTTCCATCAGAGTTA
GCGTCAGCAGTATCCGAGGCGAAAACAAGAGGCGAAGACGCCGACACAGT
CATCCCCGAAGAGCAAATACCGTCCCGCTCACTACGACCACGGAAGGGAG
CCAGAATCGCCTCAGTCACTATGAAAAAGCGAACTACTCGGAGAAGCGCT
GAAGAGAGCTCAAGCTCACGAGCATATTCGCATCAGCCCAGCACACCTAT
TGAACAAGAAGCACAGCAACCAGAGGAACCTCATGACACCCTTACCCTTG
ATACGACCGTCTCCGACAGTGAATCAGAAACATCTACCAACGCCAGTAAA
GAGAACGACCCTTCCCTATCTCCTTCCCCAGTCCGACTCGCACCACCTAG
CATCCGCAAGAACGCTTTCGGGAAACGCCCCCTTTCCGTCCTAACCATGC
CCATGGACGTGGACGATCCCTTCGCCATGGGCACAGAAGAAACAACAATA
GACGGCATGTCCGCATCCGAGAAGAACATCGCAGCAAACCACCCTAGTGA
CCTCCCAGAACGCGGCCACTCCCCACAGAGAAAGTCCCCGAAGCTGTCCG
TACTCGACAAAGGCATCAACTCATCAGGCCGGATACGCGAAGATGTCCAG
ATCTTCGAAGACGATCCCGATCCTGCCGAGCTAGGCTTCATCAGGCGAGC
CAGCGGCGACGGCAAGGAAAATCCCCGAGCCTTAGCCGGATTGAAAGATA
CCGACCCCGCCATCCGGACGTCTAATCCAAGCAATCCCCCAACGATCCTT
GCCCCCTCAGCATCGAGATCCGTCTCCTCCGGCTCGGGCTTATCAAAACC
AATCTTTGGATCACGCAAAGTCTCGTCGTCGAATGGCAAGAAAGCCAAAC
CTCGGATCGGCATTCGCAGACTCTGAGTATCATCTCTACGACGTCTCGCA
GCGGACCATGCAGCGTTGCACGAAGAACTTCCTCCCAACTATCTCTTTCC
CTCCGACGATGCCTCTGCCGGGGACGACTTGACACAGCTCACCACTCTCC
TGGCCGGGCCACAGGGTACACCATACTCGCAGGGCCTATGGCGATTGCAT
CTGAAGATGCCGGAGGACTACCCCAAGAGCCCACCAAAGGCAACATTCAG
GACAAGGATATGGCATCCAAATGTGGAGGAATCGACGGGTGCGGTCTGCG
TGGATACACTGAAGCGGGACTGGAAGCCCAACTTGACCTTGAAGGACGTT
TTGATTATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103650ATCC64974_103650Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103650-T1ATCC64974_103650-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103650-T1.cdsATCC64974_103650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103650-T1.exon3ATCC64974_103650-T1.exon3Aspergillus niger N402exon
ATCC64974_103650-T1.exon2ATCC64974_103650-T1.exon2Aspergillus niger N402exon
ATCC64974_103650-T1.exon1ATCC64974_103650-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2492484..2493979 -
Powered by Drupal