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ATCC64974_103680-T1, ATCC64974_103680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103680-T1
Unique NameATCC64974_103680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2502289..2503413-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103680-T1 ID=ATCC64974_103680-T1|Name=ATCC64974_103680-T1|organism=Aspergillus niger N402|type=mRNA|length=1125bp|location=Sequence derived from alignment at OGUI01000017.1:2502289..2503413- (Aspergillus niger N402)
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCGTATGTTCAC
ATTTTCCCTCTCTTTTTTATCATTTCCCTTTCCAATCTGCTCTCAGCAGT
AACTAATGGTACCCCTCAGTTGCCAACAACTACCTGGCTACCAGGAGCTA
CATTGTTGGGTAAGGCACACCTTTAGGGATCCTTCCCCCCCTCCCCCCTT
AGCATTGGTGCCTTGTGAAAGATTCTTCCTTGTTTGCATGATGAAAAGAA
ATTGGTCCGTGTTTATGAGGCGGCTTAAGACCCCGCTGCAAGATTAAACA
CAATTGCGAGCAATCGCGTTTCTGATTACTTGGAAAAATTCTTCTTTGCT
TTTTGTTTTCCGTCGTTCATGGATATAATCACTAGCGATGATGGTGGCAT
GAAGCTAACTGGAATATAGCGATGCTCCTTCCCAGGCCGATGTCGTGACC
TTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGC
TCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCC
CCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAG
CTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTT
CGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGG
CTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTT
GCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGGTATGTTCCATCT
TCCATTTTTGGATCTTGTGTATGATTCTAACTCGCTACAGATGATGAGAC
CGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTC
TTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAG
CTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCT
CCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTG
TAAGTAAAGATGAACACCTAGGGCGTCGTGATGATGCTAATGAAACCCCA
ACAGGCTGCCATGCAGAAGCTGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2502289..2503413-

>ATCC64974_103680-T1 ID=ATCC64974_103680-T1|Name=ATCC64974_103680-T1|organism=Aspergillus niger N402|type=CDS|length=3390bp|location=Sequence derived from alignment at OGUI01000017.1:2502289..2503413- (Aspergillus niger N402)
GCTGCCATGCAGAAGCTGTAAATGATGAGACCGACATTGAGACTATGGAG
GCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCCTCCAA
GTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCTTGTCG
TTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAGGAG
GACGAGGACCACGTCCAGTCCACCGATGTTCGATGCTCCTTCCCAGGCCG
ATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTAC
CCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCA
CGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCG
AGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGAC
ATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAA
GGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGC
CCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGTT
GCCAACAACTACCTGGCTACCAGGAGCTACATTGTTGGATGGGTTTCACT
GATCTCGCTTCCGAAGCCGGCCTCACCCGCTGCCATGCAGAAGCTGTAAA
TGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGA
TCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGT
ATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCT
TGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCA
CCGATGTTCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTT
CTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCGCTGGTACA
AGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCGGCGATGCC
TCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTGCCCACCAA
CCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCTCCGACG
AGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCT
GAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCT
CGTGACTCTTGAGGTTAAGCCTTGGGTTGCCAACAACTACCTGGCTACCA
GGAGCTACATTGTTGGATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCC
TCACCCGCTGCCATGCAGAAGCTGTAAATGATGAGACCGACATTGAGACT
ATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGC
CTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACC
TTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATC
GAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTCGATGCTCCTTCCC
AGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAG
AAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGC
TGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACG
GCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGAC
GACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGT
CGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGG
CCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCT
TGGGTTGCCAACAACTACCTGGCTACCAGGAGCTACATTGTTGGATGGGT
TTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCGCTGCCATGCAGAAGC
TGTAAATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCA
TTGAGATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGT
TACGGTATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGT
CTCCCTTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCC
AGTCCACCGATGTTCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAA
GGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCGCT
GGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCGGC
GATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTGCC
CACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCT
CCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGT
CTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAA
GTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGTTGCCAACAACTACCTGG
CTACCAGGAGCTACATTGTTGGATGGGTTTCACTGATCTCGCTTCCGAAG
CCGGCCTCACCCGCTGCCATGCAGAAGCTGTAAATGATGAGACCGACATT
GAGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTG
GGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGA
TCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCT
CAGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTCGATGCTC
CTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGAC
GCCGAGAAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTT
CGAGGCTGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTG
CCTACGGCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAAC
GACGACGACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCC
CGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGA
AGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTT
AAGCCTTGGGTTGCCAACAACTACCTGGCTACCAGGAGCTACATTGTTGG
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103680ATCC64974_103680Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103680-T1ATCC64974_103680-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103680-T1.cdsATCC64974_103680-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103680-T1.exon5ATCC64974_103680-T1.exon5Aspergillus niger N402exon
ATCC64974_103680-T1.exon4ATCC64974_103680-T1.exon4Aspergillus niger N402exon
ATCC64974_103680-T1.exon3ATCC64974_103680-T1.exon3Aspergillus niger N402exon
ATCC64974_103680-T1.exon2ATCC64974_103680-T1.exon2Aspergillus niger N402exon
ATCC64974_103680-T1.exon1ATCC64974_103680-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092644ZU
DBxrefInterPro:IPR036219
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR001326
DBxrefInterPro:IPR014717
DBxrefInterPro:IPR018940
DBxrefInterPro:IPR014038
DBxrefPFAM:PF00736
DBxrefPFAM:PF10587
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2502289..2503413 -
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