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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:2513047..2514172+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_103710-T1 ID=ATCC64974_103710-T1|Name=ATCC64974_103710-T1|organism=Aspergillus niger N402|type=mRNA|length=1126bp|location=Sequence derived from alignment at OGUI01000017.1:2513047..2514172+ (Aspergillus niger N402)
ATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGGTATGTTT
CCATCGTCGCCTCCCATGTGTTGCCCTTAGCATGGTTGGCTAACCTCTTC
TTTAGACCGTCGTTATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTG
GCTTGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCAC
GGAGTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGTAAGTAGAGCCT
CGGTTTTTTTGGAAGAATCTCAGCTAACTCTCAATTCTCTTGAAGGGTAC
GGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGATCTGA
CCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGAAC
CACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCC
CGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGATA
CGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGTGG
CTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCT
TATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGCTC
CTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCAGC
CAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGA
GGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGGCATTC
TCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTAAG
AAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACAT
TGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGATGTTCG
TTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATTCA
TTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCA
TGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACG
GCGTCCCATCTCGCCCGAGAGAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:2513047..2514172+ >ATCC64974_103710-T1 ID=ATCC64974_103710-T1|Name=ATCC64974_103710-T1|organism=Aspergillus niger N402|type=CDS|length=3015bp|location=Sequence derived from alignment at OGUI01000017.1:2513047..2514172+ (Aspergillus niger N402)
ATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGACCGTCGT
TATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTG
CAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCACGGAGTCGAAGCTC
CAGGATGCCCTCGAGGCTGTCAAGGGTACGGCGGCTGAAGCCGACCGGCA
GAGATTCCACTACATCTGTGCGGATCTGACCAATGCTGCGGAGTGTGACC
GTGTCATGGCCGAAGTCACCGAATGGAACCACGGACAATCTCCCGATATC
GTATGGTGCTGCGCAGGATACTGCAGCCCCGGCTTCTTTGCCGAGACCCC
CGTCCAGACATTGAGGGACCAAATGGATACGGTGTACTGGACAGCTGCCA
ACACTGCTCATGCCATCCTGAGACGGTGGCTAGTACCTATTAGCCCCAGC
CAGCAGATGCCACTACCTCCCAGACACCTTATCTTCACATGCTCTACCCT
CGCATTTGTGCCCATTGCTGGTTATGCTCCTTACTCGCCAGCCAAAGCCG
CGATCCGCTCATTGTCTGATACTCTCAGCCAAGAAATTGAGATGTACAAC
GGTTCTCGCGCCGACAAGTGCCGCTCGGAGGCTCCAGCCACGGACGTGAA
GATCCATACAGTCTTCCCCATGGGCATTCTCAGCCCTGGATTCGACAACG
AACAGAAGCTCAAGCCGGAGCTTACTAAGAAGCTGGAGGCTGCTGACAAG
CCACAGACTCCGAGGGAGGTTGCAAACATTGCGATCAAGGCCCTGGAGAG
GGGCGAGTACATGATCACCACGATGTTCGTTGGCGATGTGATGAAGGGAT
CAGCGCTCGGAGGCAGCCAACGGAATTCATTCATTAAGGATACTTTCACT
GGCTGGCTCAGCAACTTGTTGTTCCTGCATGTCAGCCCCGATCTCAGGAG
GCAGGCCTGGAGCTGGGGTGAGAAGCACGGCGTCCCATCTCGCCCGAGAG
AGTAAATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGACC
GTCGTTATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCA
GCTTGCAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCACGGAGTCGA
AGCTCCAGGATGCCCTCGAGGCTGTCAAGGGTACGGCGGCTGAAGCCGAC
CGGCAGAGATTCCACTACATCTGTGCGGATCTGACCAATGCTGCGGAGTG
TGACCGTGTCATGGCCGAAGTCACCGAATGGAACCACGGACAATCTCCCG
ATATCGTATGGTGCTGCGCAGGATACTGCAGCCCCGGCTTCTTTGCCGAG
ACCCCCGTCCAGACATTGAGGGACCAAATGGATACGGTGTACTGGACAGC
TGCCAACACTGCTCATGCCATCCTGAGACGGTGGCTAGTACCTATTAGCC
CCAGCCAGCAGATGCCACTACCTCCCAGACACCTTATCTTCACATGCTCT
ACCCTCGCATTTGTGCCCATTGCTGGTTATGCTCCTTACTCGCCAGCCAA
AGCCGCGATCCGCTCATTGTCTGATACTCTCAGCCAAGAAATTGAGATGT
ACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGAGGCTCCAGCCACGGAC
GTGAAGATCCATACAGTCTTCCCCATGGGCATTCTCAGCCCTGGATTCGA
CAACGAACAGAAGCTCAAGCCGGAGCTTACTAAGAAGCTGGAGGCTGCTG
ACAAGCCACAGACTCCGAGGGAGGTTGCAAACATTGCGATCAAGGCCCTG
GAGAGGGGCGAGTACATGATCACCACGATGTTCGTTGGCGATGTGATGAA
GGGATCAGCGCTCGGAGGCAGCCAACGGAATTCATTCATTAAGGATACTT
TCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCATGTCAGCCCCGATCTC
AGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACGGCGTCCCATCTCGCCC
GAGAGAGTAAATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCA
GGACCGTCGTTATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCT
TGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCACGGA
GTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGGTACGGCGGCTGAAG
CCGACCGGCAGAGATTCCACTACATCTGTGCGGATCTGACCAATGCTGCG
GAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGAACCACGGACAATC
TCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCCCGGCTTCTTTG
CCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGATACGGTGTACTGG
ACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGTGGCTAGTACCTAT
TAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCTTATCTTCACAT
GCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGCTCCTTACTCGCCA
GCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCAGCCAAGAAATTGA
GATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGAGGCTCCAGCCA
CGGACGTGAAGATCCATACAGTCTTCCCCATGGGCATTCTCAGCCCTGGA
TTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTAAGAAGCTGGAGGC
TGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACATTGCGATCAAGG
CCCTGGAGAGGGGCGAGTACATGATCACCACGATGTTCGTTGGCGATGTG
ATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATTCATTCATTAAGGA
TACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCATGTCAGCCCCG
ATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACGGCGTCCCATCT
CGCCCGAGAGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_103710-T1 | ATCC64974_103710-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | 3-dehydrosphinganine reductase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:2513047..2514172 + |
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