You are here

Home

ATCC64974_103730-T1, ATCC64974_103730-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103730-T1
Unique NameATCC64974_103730-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2516873..2517870-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103730-T1 ID=ATCC64974_103730-T1|Name=ATCC64974_103730-T1|organism=Aspergillus niger N402|type=mRNA|length=998bp|location=Sequence derived from alignment at OGUI01000017.1:2516873..2517870- (Aspergillus niger N402)
ATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAAGGGCCAGAG
GACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACCCCGTTGATG
ACGAGTCGCAGCCCAAGAAAGTCAGTACCACACCCCGTGCAAGAGCCAGA
AAATGAGGTGGAAACGGATGCGGTTTCGTTATGAACAAATGCGACGGGTT
TGCGCTGGTCATTGGGAAAGATTGAACCTCCTGTATAAAAAAGCTGGAGG
TTTGGGGGAAATTCAAAGATTCAGGGCCAGTGCTCTATACCGCATGAGTT
GATAAGGAAATCGCATCTTGGAGAAATTGGGGCCCCGGAATTCGAAATGG
ACAAGAAGGAATTGGAACAGGCATTCTGACATGGTTATTTTATATACATA
TAGGTCCGCAAGGCTATCCGTCCCGCTAAGGTCCGCGAGAGCCTCCAGCC
CGGTACCGTTCTGATCCTCCTCGCCGGCCGCTTCCGTGGAAAGCGTGTCG
TTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCCTCGTCACCGGTCCCTTC
AAGATCAACGGTGTTCCCCTCCGCCGTGTCAACGCTCGTTACGTGATCGC
CACCAGCACCCGTATCGACATCAGCGGTGTTGACGCCCAGACCATCGAGA
AGGTCTCCGCTGCCGACTACTTCACCAAGGAGAAGAAGGCTGAGAAGAAG
ACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAGCCCCAGGTATGTGCACA
TACACACCCGTGGTTGGGCTCTTCCTTCGAGAAGAGTCCGACTTTTGCGG
AAGTGGCCGGATGATACTGATGTAGCGTTTTTTCTCCATCAACAGAAGAA
GGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGCCGTTGACCAGTCCA
TCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAAGCTACCTGGCCAGC
ACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAGATGAAGTGGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2516873..2517870-

>ATCC64974_103730-T1 ID=ATCC64974_103730-T1|Name=ATCC64974_103730-T1|organism=Aspergillus niger N402|type=CDS|length=1827bp|location=Sequence derived from alignment at OGUI01000017.1:2516873..2517870- (Aspergillus niger N402)
AAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGCCGTTGACCA
GTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAAGCTACCTGG
CCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAGATGAAGTGG
TAGGTCCGCAAGGCTATCCGTCCCGCTAAGGTCCGCGAGAGCCTCCAGCC
CGGTACCGTTCTGATCCTCCTCGCCGGCCGCTTCCGTGGAAAGCGTGTCG
TTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCCTCGTCACCGGTCCCTTC
AAGATCAACGGTGTTCCCCTCCGCCGTGTCAACGCTCGTTACGTGATCGC
CACCAGCACCCGTATCGACATCAGCGGTGTTGACGCCCAGACCATCGAGA
AGGTCTCCGCTGCCGACTACTTCACCAAGGAGAAGAAGGCTGAGAAGAAG
ACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAGCCCCAGATGTCGGACTC
TACTGTTGGCCAGACGAAGCAGTTTGGAAAGGGCCAGAGGACCGTCCCTC
ACCCGGCCCAGAAGGCCCAGAAATGGTACCCCGTTGATGACGAGTCGCAG
CCCAAGAAAAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGC
CGTTGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAA
GCTACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAG
ATGAAGTGGTAGGTCCGCAAGGCTATCCGTCCCGCTAAGGTCCGCGAGAG
CCTCCAGCCCGGTACCGTTCTGATCCTCCTCGCCGGCCGCTTCCGTGGAA
AGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCCTCGTCACC
GGTCCCTTCAAGATCAACGGTGTTCCCCTCCGCCGTGTCAACGCTCGTTA
CGTGATCGCCACCAGCACCCGTATCGACATCAGCGGTGTTGACGCCCAGA
CCATCGAGAAGGTCTCCGCTGCCGACTACTTCACCAAGGAGAAGAAGGCT
GAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAGCCCCAGAT
GTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAAGGGCCAGAGGA
CCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACCCCGTTGATGAC
GAGTCGCAGCCCAAGAAAAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGA
CCAGAAGGCCGTTGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTT
TCCTCGGAAGCTACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAG
CCCCACGAGATGAAGTGGTAGGTCCGCAAGGCTATCCGTCCCGCTAAGGT
CCGCGAGAGCCTCCAGCCCGGTACCGTTCTGATCCTCCTCGCCGGCCGCT
TCCGTGGAAAGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGGGTGTTCTC
CTCGTCACCGGTCCCTTCAAGATCAACGGTGTTCCCCTCCGCCGTGTCAA
CGCTCGTTACGTGATCGCCACCAGCACCCGTATCGACATCAGCGGTGTTG
ACGCCCAGACCATCGAGAAGGTCTCCGCTGCCGACTACTTCACCAAGGAG
AAGAAGGCTGAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAA
GCCCCAGATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAAGG
GCCAGAGGACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACCCC
GTTGATGACGAGTCGCAGCCCAAGAAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103730ATCC64974_103730Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103730-T1ATCC64974_103730-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103730-T1.cdsATCC64974_103730-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103730-T1.exon3ATCC64974_103730-T1.exon3Aspergillus niger N402exon
ATCC64974_103730-T1.exon2ATCC64974_103730-T1.exon2Aspergillus niger N402exon
ATCC64974_103730-T1.exon1ATCC64974_103730-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041997
DBxrefInterPro:IPR000915
DBxrefInterPro:IPR014722
DBxrefPFAM:PF01159
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2516873..2517870 -
Powered by Drupal