You are here

Home

ATCC64974_103870-T1, ATCC64974_103870-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103870-T1
Unique NameATCC64974_103870-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2562311..2563503+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103870-T1 ID=ATCC64974_103870-T1|Name=ATCC64974_103870-T1|organism=Aspergillus niger N402|type=mRNA|length=1193bp|location=Sequence derived from alignment at OGUI01000017.1:2562311..2563503+ (Aspergillus niger N402)
ATGCCGACTCCGAGTGATAACACCCCGCCCTTGAATGCTTCAATCGCAGA
AGAAATCTCCGCTCGCTCTACCTGTCCCCCAGAGGTTGAAAGAGAGACAT
TACATACCAGAGAAGAAAGGCCGTATCCCTGGGTGTCGGCGTGGGAAAGG
AGAAGCACCAGCGATGATGCTCCCGACAACACGTTTTCGCCAACCGTCCC
ATCAAACCAGACCGCCTTAACGCCATCAGATGGAACTCCCTTTACTTCTA
CTGATGCGGACCCCGTGAGGGGCGAGCCAGTAGCCAGAGCGCCCACGAAG
GGCGTGGGTAGATCGGAAGATGAACCTGCTGCGGGGAGACTGAGCCCTGC
TGCGGAGTCATCGTGCTCCTCCGGCCCATCATCTCCAGTCACCCCTTCAT
CGGCCACTTCTCTACTAAGCTATGAATTTTCTAACATTCGGGTATGGTGG
CCTACTTTTATCCTTCCCGTCTCTAGGTCCCCCTTGCTGATTGTGCTAGC
TGTTACCCAATTATTCGTCGTCTTTTTTGCGACCGGGAAGTAGATTTACT
GGCACGCAGCAGTCAGACAGCCATGTCTACAGCGTTGATGTGGAGATCAA
GCACGTTGATATGCTTGAATCTTATCTTTGTGGATACCTCCGCATACAAG
GTCCGTGAGCGCTTGCACCAGCCCGCTGTGGCCCATTCTAATCTTTTTGC
ATCAGGTCTTACCGAGGATCACCCTACTCTAACAACGTTTTTTGAGGGCG
AAATCATCGGAACCAAGCACACGTTTAAAACTAGAAATGAAGCATGGGGC
GCGACCGAAAAGACTGACATGCAACATTGGGGACGGTTTCCCGCTTGGCG
ATCGCAGGCGAAACAGGCGAAGAGACCGGATTTCACATTTCGAAATTTTG
CCCAGCGTGAGCATCTCTTCATGCGTTGGAAAGAGTACTTCCTCGTTCCC
GATCATCGCGTGAGGTCGATCTCCGGAGCCAGCTTCGAAGGCTTCTACTA
CATATGTTTTAATCAGGTGGAGGGAACGGTTGCTGGGATTTACTTTCACG
CCAAGAGCGAAAAGTATGTGTCTGCCTCATCCCAGTGGTATTTATGACAG
ACAAAACTGACTTGGTTAATTGCTAGGTATCAACAACTCGAACTCAGACA
TGTCAAAGACTACGGTTGTGCGCCAGCCATGGAGTTCCGTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2562311..2563503+

>ATCC64974_103870-T1 ID=ATCC64974_103870-T1|Name=ATCC64974_103870-T1|organism=Aspergillus niger N402|type=CDS|length=4068bp|location=Sequence derived from alignment at OGUI01000017.1:2562311..2563503+ (Aspergillus niger N402)
ATGCCGACTCCGAGTGATAACACCCCGCCCTTGAATGCTTCAATCGCAGA
AGAAATCTCCGCTCGCTCTACCTGTCCCCCAGAGGTTGAAAGAGAGACAT
TACATACCAGAGAAGAAAGGCCGTATCCCTGGGTGTCGGCGTGGGAAAGG
AGAAGCACCAGCGATGATGCTCCCGACAACACGTTTTCGCCAACCGTCCC
ATCAAACCAGACCGCCTTAACGCCATCAGATGGAACTCCCTTTACTTCTA
CTGATGCGGACCCCGTGAGGGGCGAGCCAGTAGCCAGAGCGCCCACGAAG
GGCGTGGGTAGATCGGAAGATGAACCTGCTGCGGGGAGACTGAGCCCTGC
TGCGGAGTCATCGTGCTCCTCCGGCCCATCATCTCCAGTCACCCCTTCAT
CGGCCACTTCTCTACTAAGCTATGAATTTTCTAACATTCGGCTGTTACCC
AATTATTCGTCGTCTTTTTTGCGACCGGGAAGTAGATTTACTGGCACGCA
GCAGTCAGACAGCCATGTCTACAGCGTTGATGTGGAGATCAAGCACGTTG
ATATGCTTGAATCTTATCTTTGTGGATACCTCCGCATACAAGGTCTTACC
GAGGATCACCCTACTCTAACAACGTTTTTTGAGGGCGAAATCATCGGAAC
CAAGCACACGTTTAAAACTAGAAATGAAGCATGGGGCGCGACCGAAAAGA
CTGACATGCAACATTGGGGACGGTTTCCCGCTTGGCGATCGCAGGCGAAA
CAGGCGAAGAGACCGGATTTCACATTTCGAAATTTTGCCCAGCGTGAGCA
TCTCTTCATGCGTTGGAAAGAGTACTTCCTCGTTCCCGATCATCGCGTGA
GGTCGATCTCCGGAGCCAGCTTCGAAGGCTTCTACTACATATGTTTTAAT
CAGGTGGAGGGAACGGTTGCTGGGATTTACTTTCACGCCAAGAGCGAAAA
GTATCAACAACTCGAACTCAGACATGTCAAAGACTACGGTTGTGCGCCAG
CCATGGAGTTCCGTTGAATGCCGACTCCGAGTGATAACACCCCGCCCTTG
AATGCTTCAATCGCAGAAGAAATCTCCGCTCGCTCTACCTGTCCCCCAGA
GGTTGAAAGAGAGACATTACATACCAGAGAAGAAAGGCCGTATCCCTGGG
TGTCGGCGTGGGAAAGGAGAAGCACCAGCGATGATGCTCCCGACAACACG
TTTTCGCCAACCGTCCCATCAAACCAGACCGCCTTAACGCCATCAGATGG
AACTCCCTTTACTTCTACTGATGCGGACCCCGTGAGGGGCGAGCCAGTAG
CCAGAGCGCCCACGAAGGGCGTGGGTAGATCGGAAGATGAACCTGCTGCG
GGGAGACTGAGCCCTGCTGCGGAGTCATCGTGCTCCTCCGGCCCATCATC
TCCAGTCACCCCTTCATCGGCCACTTCTCTACTAAGCTATGAATTTTCTA
ACATTCGGCTGTTACCCAATTATTCGTCGTCTTTTTTGCGACCGGGAAGT
AGATTTACTGGCACGCAGCAGTCAGACAGCCATGTCTACAGCGTTGATGT
GGAGATCAAGCACGTTGATATGCTTGAATCTTATCTTTGTGGATACCTCC
GCATACAAGGTCTTACCGAGGATCACCCTACTCTAACAACGTTTTTTGAG
GGCGAAATCATCGGAACCAAGCACACGTTTAAAACTAGAAATGAAGCATG
GGGCGCGACCGAAAAGACTGACATGCAACATTGGGGACGGTTTCCCGCTT
GGCGATCGCAGGCGAAACAGGCGAAGAGACCGGATTTCACATTTCGAAAT
TTTGCCCAGCGTGAGCATCTCTTCATGCGTTGGAAAGAGTACTTCCTCGT
TCCCGATCATCGCGTGAGGTCGATCTCCGGAGCCAGCTTCGAAGGCTTCT
ACTACATATGTTTTAATCAGGTGGAGGGAACGGTTGCTGGGATTTACTTT
CACGCCAAGAGCGAAAAGTATCAACAACTCGAACTCAGACATGTCAAAGA
CTACGGTTGTGCGCCAGCCATGGAGTTCCGTTGAATGCCGACTCCGAGTG
ATAACACCCCGCCCTTGAATGCTTCAATCGCAGAAGAAATCTCCGCTCGC
TCTACCTGTCCCCCAGAGGTTGAAAGAGAGACATTACATACCAGAGAAGA
AAGGCCGTATCCCTGGGTGTCGGCGTGGGAAAGGAGAAGCACCAGCGATG
ATGCTCCCGACAACACGTTTTCGCCAACCGTCCCATCAAACCAGACCGCC
TTAACGCCATCAGATGGAACTCCCTTTACTTCTACTGATGCGGACCCCGT
GAGGGGCGAGCCAGTAGCCAGAGCGCCCACGAAGGGCGTGGGTAGATCGG
AAGATGAACCTGCTGCGGGGAGACTGAGCCCTGCTGCGGAGTCATCGTGC
TCCTCCGGCCCATCATCTCCAGTCACCCCTTCATCGGCCACTTCTCTACT
AAGCTATGAATTTTCTAACATTCGGCTGTTACCCAATTATTCGTCGTCTT
TTTTGCGACCGGGAAGTAGATTTACTGGCACGCAGCAGTCAGACAGCCAT
GTCTACAGCGTTGATGTGGAGATCAAGCACGTTGATATGCTTGAATCTTA
TCTTTGTGGATACCTCCGCATACAAGGTCTTACCGAGGATCACCCTACTC
TAACAACGTTTTTTGAGGGCGAAATCATCGGAACCAAGCACACGTTTAAA
ACTAGAAATGAAGCATGGGGCGCGACCGAAAAGACTGACATGCAACATTG
GGGACGGTTTCCCGCTTGGCGATCGCAGGCGAAACAGGCGAAGAGACCGG
ATTTCACATTTCGAAATTTTGCCCAGCGTGAGCATCTCTTCATGCGTTGG
AAAGAGTACTTCCTCGTTCCCGATCATCGCGTGAGGTCGATCTCCGGAGC
CAGCTTCGAAGGCTTCTACTACATATGTTTTAATCAGGTGGAGGGAACGG
TTGCTGGGATTTACTTTCACGCCAAGAGCGAAAAGTATCAACAACTCGAA
CTCAGACATGTCAAAGACTACGGTTGTGCGCCAGCCATGGAGTTCCGTTG
AATGCCGACTCCGAGTGATAACACCCCGCCCTTGAATGCTTCAATCGCAG
AAGAAATCTCCGCTCGCTCTACCTGTCCCCCAGAGGTTGAAAGAGAGACA
TTACATACCAGAGAAGAAAGGCCGTATCCCTGGGTGTCGGCGTGGGAAAG
GAGAAGCACCAGCGATGATGCTCCCGACAACACGTTTTCGCCAACCGTCC
CATCAAACCAGACCGCCTTAACGCCATCAGATGGAACTCCCTTTACTTCT
ACTGATGCGGACCCCGTGAGGGGCGAGCCAGTAGCCAGAGCGCCCACGAA
GGGCGTGGGTAGATCGGAAGATGAACCTGCTGCGGGGAGACTGAGCCCTG
CTGCGGAGTCATCGTGCTCCTCCGGCCCATCATCTCCAGTCACCCCTTCA
TCGGCCACTTCTCTACTAAGCTATGAATTTTCTAACATTCGGCTGTTACC
CAATTATTCGTCGTCTTTTTTGCGACCGGGAAGTAGATTTACTGGCACGC
AGCAGTCAGACAGCCATGTCTACAGCGTTGATGTGGAGATCAAGCACGTT
GATATGCTTGAATCTTATCTTTGTGGATACCTCCGCATACAAGGTCTTAC
CGAGGATCACCCTACTCTAACAACGTTTTTTGAGGGCGAAATCATCGGAA
CCAAGCACACGTTTAAAACTAGAAATGAAGCATGGGGCGCGACCGAAAAG
ACTGACATGCAACATTGGGGACGGTTTCCCGCTTGGCGATCGCAGGCGAA
ACAGGCGAAGAGACCGGATTTCACATTTCGAAATTTTGCCCAGCGTGAGC
ATCTCTTCATGCGTTGGAAAGAGTACTTCCTCGTTCCCGATCATCGCGTG
AGGTCGATCTCCGGAGCCAGCTTCGAAGGCTTCTACTACATATGTTTTAA
TCAGGTGGAGGGAACGGTTGCTGGGATTTACTTTCACGCCAAGAGCGAAA
AGTATCAACAACTCGAACTCAGACATGTCAAAGACTACGGTTGTGCGCCA
GCCATGGAGTTCCGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103870ATCC64974_103870Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103870-T1.exon1ATCC64974_103870-T1.exon1Aspergillus niger N402exon
ATCC64974_103870-T1.exon2ATCC64974_103870-T1.exon2Aspergillus niger N402exon
ATCC64974_103870-T1.exon3ATCC64974_103870-T1.exon3Aspergillus niger N402exon
ATCC64974_103870-T1.exon4ATCC64974_103870-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103870-T1.cdsATCC64974_103870-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103870-T1ATCC64974_103870-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092648U2
DBxrefInterPro:IPR018618
DBxrefPFAM:PF09783
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2562311..2563503 +
Powered by Drupal