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ATCC64974_104180-T1, ATCC64974_104180-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104180-T1
Unique NameATCC64974_104180-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2658179..2659540-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104180-T1 ID=ATCC64974_104180-T1|Name=ATCC64974_104180-T1|organism=Aspergillus niger N402|type=mRNA|length=1362bp|location=Sequence derived from alignment at OGUI01000017.1:2658179..2659540- (Aspergillus niger N402)
ATGGACGTCGTTCCCTCTACCACACCCGACGAGGCAGTGCGCCTCTCCGC
CAAGCGGACGGCCGAGCTCTTCGGTTCTGACTACCTAATGGTCACCCCGT
CCGTCGCCAATGGCTCCATCGCCACGTCCTACCGGCGCAAAGCAGAATAC
GAAGATGTGAAGGAACTCCCCCCAGCGCTCGCCGAAAAGCAAGCCAAAGC
CGTGGCCGCTGGACGCGCCAAACGCCCCAAGATCCAACCACAGGCCCAAG
CCGCCGTGGACGGCAGCGGCGCGTCCATGGCACTCGTCAAGAAGGCCCCC
GGCCCAGCAGCCGGCGGCGTCGGCGGTGAAAACGCTCCCAAGAGTCTCAT
CCAACGTCCCTCGGCGACGAAACAGCAACGACCCGACTGGCACCCGCCAT
GGAAGCTCATGCGGGTCATCTCCGGCCACTTGGGTTGGGTGCGCAGTTTG
GCCGTCGAGCCCAACAACGAGTGGTTTGCTAGTGGTGCAGGCGATCGGAC
CATCAAGATCTGGAATCTGGCTACAGGTGCCCTCCGTCTCACTCTCACGG
GTCACATTTCCACTGTCCGCGGCTTGGCCGTGTCCCCCCGACATCCGTAC
CTCTTCTCCTGCGGTGAAGACAAAATGGTCAAGTGTTGGGATCTCGAAAC
CAACAAAGTCATCCGTCACTACCACGGCCACCTCAGCGGCGTCTACACCC
TCGACCTGCACCCCCGTCTCGACCTCCTCGTCACAGGTGGTCGTGACGGC
GTAGCCCGCGTCTGGGACATGCGCACTCGCGCCAACGTCCACGTCCTCGC
CGGCCACAAGGGCACCGTCGCCGATGTCAAATGCCAGGAAGCCGACCCGC
AGATCATCTCCGGCTCCCTGGACGCCACCGTCCGCCTCTGGGATCTCGCA
GCCGGTAAATCCATGGGCGTGCTCACGCACCACAAGAAGGGTGTGCGCGC
TCTCGCCACTCACCCCCGCGAATTCACCTTCGCCTCCGCCAGCACCGGCT
CCATTAAGCAATGGAAGTGCCCCGAGGGCGACTTCATGCAGAACTTCGAT
GGTCAAAACGCTATTATCAACACCCTCTCCGTCAACGAAGACAACGTCAT
GTTCTCCGGCGGTGATAACGGCTCCATGTGCTTCTGGGATTGGAAGACCG
GGTACCAGTTCCAGAGCATCGACGCTGTCGCTCAGCCGGGTTCTCTGGAA
GCCGAGGCGGGTATTATGGCTTCGACGTTTGATCGTACTGGCTTGCGTCT
TATTACTGGTGAGGCTGACAAGACTATTAAGATTTGGAAGCCGGATGATG
AGGCCACCGAAGAATCGCACCCTGTTACCTGGGCCCCCACCTTGGGGAGA
CAGAGGTATTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:2658179..2659540-

>ATCC64974_104180-T1 ID=ATCC64974_104180-T1|Name=ATCC64974_104180-T1|organism=Aspergillus niger N402|type=CDS|length=1362bp|location=Sequence derived from alignment at OGUI01000017.1:2658179..2659540- (Aspergillus niger N402)
ATGGACGTCGTTCCCTCTACCACACCCGACGAGGCAGTGCGCCTCTCCGC
CAAGCGGACGGCCGAGCTCTTCGGTTCTGACTACCTAATGGTCACCCCGT
CCGTCGCCAATGGCTCCATCGCCACGTCCTACCGGCGCAAAGCAGAATAC
GAAGATGTGAAGGAACTCCCCCCAGCGCTCGCCGAAAAGCAAGCCAAAGC
CGTGGCCGCTGGACGCGCCAAACGCCCCAAGATCCAACCACAGGCCCAAG
CCGCCGTGGACGGCAGCGGCGCGTCCATGGCACTCGTCAAGAAGGCCCCC
GGCCCAGCAGCCGGCGGCGTCGGCGGTGAAAACGCTCCCAAGAGTCTCAT
CCAACGTCCCTCGGCGACGAAACAGCAACGACCCGACTGGCACCCGCCAT
GGAAGCTCATGCGGGTCATCTCCGGCCACTTGGGTTGGGTGCGCAGTTTG
GCCGTCGAGCCCAACAACGAGTGGTTTGCTAGTGGTGCAGGCGATCGGAC
CATCAAGATCTGGAATCTGGCTACAGGTGCCCTCCGTCTCACTCTCACGG
GTCACATTTCCACTGTCCGCGGCTTGGCCGTGTCCCCCCGACATCCGTAC
CTCTTCTCCTGCGGTGAAGACAAAATGGTCAAGTGTTGGGATCTCGAAAC
CAACAAAGTCATCCGTCACTACCACGGCCACCTCAGCGGCGTCTACACCC
TCGACCTGCACCCCCGTCTCGACCTCCTCGTCACAGGTGGTCGTGACGGC
GTAGCCCGCGTCTGGGACATGCGCACTCGCGCCAACGTCCACGTCCTCGC
CGGCCACAAGGGCACCGTCGCCGATGTCAAATGCCAGGAAGCCGACCCGC
AGATCATCTCCGGCTCCCTGGACGCCACCGTCCGCCTCTGGGATCTCGCA
GCCGGTAAATCCATGGGCGTGCTCACGCACCACAAGAAGGGTGTGCGCGC
TCTCGCCACTCACCCCCGCGAATTCACCTTCGCCTCCGCCAGCACCGGCT
CCATTAAGCAATGGAAGTGCCCCGAGGGCGACTTCATGCAGAACTTCGAT
GGTCAAAACGCTATTATCAACACCCTCTCCGTCAACGAAGACAACGTCAT
GTTCTCCGGCGGTGATAACGGCTCCATGTGCTTCTGGGATTGGAAGACCG
GGTACCAGTTCCAGAGCATCGACGCTGTCGCTCAGCCGGGTTCTCTGGAA
GCCGAGGCGGGTATTATGGCTTCGACGTTTGATCGTACTGGCTTGCGTCT
TATTACTGGTGAGGCTGACAAGACTATTAAGATTTGGAAGCCGGATGATG
AGGCCACCGAAGAATCGCACCCTGTTACCTGGGCCCCCACCTTGGGGAGA
CAGAGGTATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP46ATCC64974_104180Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104180-T1.cdsATCC64974_104180-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104180-T1.exon1ATCC64974_104180-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104180-T1ATCC64974_104180-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262KUJ
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Productpre-mRNA-splicing factor prp46
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2658179..2659540 -
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