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ATCC64974_104370-T1, ATCC64974_104370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104370-T1
Unique NameATCC64974_104370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2730865..2731791-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104370-T1 ID=ATCC64974_104370-T1|Name=ATCC64974_104370-T1|organism=Aspergillus niger N402|type=mRNA|length=927bp|location=Sequence derived from alignment at OGUI01000017.1:2730865..2731791- (Aspergillus niger N402)
ATGGTATGTTGAATGCGCCATGCTGCTATTCGCAGTTTTTGATTCTGCGT
GAAAAAAGTGAAATGCTGACGGGAGTTTTTCTATTTGAAGTCGTCCAAGG
TCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAG
CTGGAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGC
TGGCGGTGCCTCCTCGAAGACCCACAGAATGTGCGTTTGAAAAGAATTCA
TCTGATTTTCTCCTGCGAACCCCTCATGTGTGTGCGTTGTGTGTGGTGTG
TGAAGGATATGAGATTTGCACCTGTCGGATTGTGGATTACGGCGGGAGGA
AGGAAACGACAACGACATTCGACAATTGGAAAAATGAGACGACGCATACC
AGTCAAGAACAGAAATCCCGACAACCCATGAAATCGACCTACAATAAGGA
AACGAGGGGTACACGACCGAACGACAACAAGATCCAAGCCGAGAAGAAAC
TTTCCGACAGGGCGCAAAATCCAACATATCTACCACCTACATGAAAAAAA
TGGGCACACATGCGCAGTGAACCAGGAACAAGAACAGGGATGCTGATATA
CCGTCTTTTAACAGCCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGAC
CGTCATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCA
AGAAGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGC
CGCCGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAA
GCAGGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGTACGACCTG
CCCAACATACCTGAATATATGACCCCGCGGGGGAAAATATGAAGGACATT
GGCTAACTGGGATTGCAACAGGCTTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2730865..2731791-

>ATCC64974_104370-T1 ID=ATCC64974_104370-T1|Name=ATCC64974_104370-T1|organism=Aspergillus niger N402|type=CDS|length=1500bp|location=Sequence derived from alignment at OGUI01000017.1:2730865..2731791- (Aspergillus niger N402)
GCTTAACCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCA
ACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTAC
ACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCT
CACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGA
TCCACTTCCCCCAGCGGAAGTACGCTGTTAAGTCGTCCAAGGTCAAGGCT
GGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGA
ATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTG
CCTCCTCGAAGACCCACAGAATATGGCTTAACCACGACGTTCGCAAGTCG
ATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCG
CTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGC
TCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAG
ACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGC
TGTTAAGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGG
ATGACCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTC
CGTGTCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATATG
GCTTAACCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCA
ACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTAC
ACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCT
CACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGA
TCCACTTCCCCCAGCGGAAGTACGCTGTTAAGTCGTCCAAGGTCAAGGCT
GGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGA
ATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTG
CCTCCTCGAAGACCCACAGAATATGGCTTAACCACGACGTTCGCAAGTCG
ATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCG
CTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGC
TCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAG
ACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGC
TGTTAAGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGG
ATGACCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTC
CGTGTCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL35ATCC64974_104370Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104370-T1ATCC64974_104370-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104370-T1.cdsATCC64974_104370-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104370-T1.exon4ATCC64974_104370-T1.exon4Aspergillus niger N402exon
ATCC64974_104370-T1.exon3ATCC64974_104370-T1.exon3Aspergillus niger N402exon
ATCC64974_104370-T1.exon2ATCC64974_104370-T1.exon2Aspergillus niger N402exon
ATCC64974_104370-T1.exon1ATCC64974_104370-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09265FTY
DBxrefInterPro:IPR036049
DBxrefInterPro:IPR001854
DBxrefPFAM:PF00831
Product60S ribosomal protein L35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2730865..2731791 -
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