You are here

Home

ATCC64974_104380-T1, ATCC64974_104380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104380-T1
Unique NameATCC64974_104380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2732306..2733137+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104380-T1 ID=ATCC64974_104380-T1|Name=ATCC64974_104380-T1|organism=Aspergillus niger N402|type=mRNA|length=832bp|location=Sequence derived from alignment at OGUI01000017.1:2732306..2733137+ (Aspergillus niger N402)
ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCG
ATCTCTCGAGACTCAGGTACGAGCATCGCTTCCCTGTCATACGGAATGGA
AATCCTAACAATGTGTATACATGATCATAGACCGAGAACCTCTTCCACAC
ATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGG
AAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAGTACGC
ATCCACTATGCCCATTCCATCACAGTTACCATCCTAATACCACAATCACA
TGAACTAATCTAATGGATCAATCACCAGCGCGACTCTCTGATCTCCCAAC
TCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAA
CAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGA
ACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATC
TCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCG
GGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGATGA
GAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATG
AGAACTTTGGTCTGCAGCGTGAGACGCTCGCTAGTATTAATCGACGCATT
GTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGAT
CGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGT
TTTGCTTTTTGATGTTGCTTTGGTTGAGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2732306..2733137+

>ATCC64974_104380-T1 ID=ATCC64974_104380-T1|Name=ATCC64974_104380-T1|organism=Aspergillus niger N402|type=CDS|length=2052bp|location=Sequence derived from alignment at OGUI01000017.1:2732306..2733137+ (Aspergillus niger N402)
ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCG
ATCTCTCGAGACTCAGACCGAGAACCTCTTCCACACATACTCTCAATATG
CTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATC
GAATCGCAGCTCAAAGACCTCCTAGAACGACGCGACTCTCTGATCTCCCA
ACTCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCA
AACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGT
GAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAA
TCTCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACC
CGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGAT
GAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAA
TGAGAACTTTGGTCTGCAGCGTGAGACGCTCGCTAGTATTAATCGACGCA
TTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAG
ATCGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGG
GTTTTGCTTTTTGATGTTGCTTTGGTTGAGGTGAATGGCCACCTCAACCG
GTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAG
ACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCGTTAACGAAGCT
CCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATCGCAGCTCAAAG
ACCTCCTAGAACGACGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTC
GACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGC
CCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGTCTCA
AATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTC
CGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGC
AGATTACATGCTTGAGGAGCGGGGTCGGATTGATGAGAGCCATAATATGA
TTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTG
CAGCGTGAGACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAA
CTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGATCGGGTCCAAGAGGA
GACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATG
TTGCTTTGGTTGAGGTGAATGGCCACCTCAACCGGTACCGGCTGGGCTCA
GCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGACCGAGAACCTCTTCC
ACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCG
GAGGAAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGACG
CGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGCAACCC
TCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTC
CTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCTGCCATCGCCGA
ATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATATCGATG
CCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAG
GAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGATGGGGTGTTGAG
TCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAGACGCTCG
CTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATG
AATGCGTTGATTGGGAAGATCGGGTCCAAGAGGAGACGGGATGCGTTGAT
TTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAGGT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005801cis-Golgi network
GO:0016021integral component of membrane
GO:0000139Golgi membrane
Vocabulary: Biological Process
TermDefinition
GO:0006888endoplasmic reticulum to Golgi vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_104380ATCC64974_104380Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104380-T1.exon1ATCC64974_104380-T1.exon1Aspergillus niger N402exon
ATCC64974_104380-T1.exon2ATCC64974_104380-T1.exon2Aspergillus niger N402exon
ATCC64974_104380-T1.exon3ATCC64974_104380-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104380-T1.cdsATCC64974_104380-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104380-T1ATCC64974_104380-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265AL8
DBxrefInterPro:IPR023601
DBxrefPFAM:PF12352
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2732306..2733137 +
Powered by Drupal