You are here

Home

ATCC64974_104390-T1, ATCC64974_104390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_104390-T1
Unique NameATCC64974_104390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2733460..2734660-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_104390-T1 ID=ATCC64974_104390-T1|Name=ATCC64974_104390-T1|organism=Aspergillus niger N402|type=mRNA|length=1201bp|location=Sequence derived from alignment at OGUI01000017.1:2733460..2734660- (Aspergillus niger N402)
ATGTGGAAGCGCACGGGGCTTCTAGCCTCATTAACTGAGCCGACGCTCCT
CCAGAACACTCGTTGCCTAAGTTGCCAATTGCGCAATGCGGCCGCACTCC
GGCCCCGAACCGCTGCGCTGCGTTACTACGCCAGCAAACCCGACACCAGC
AGCGAAACCAAGCCAAAAACACCCTCCCCCATCGCATCTCTCGCAAGCAA
GACCAACAGAGTAGCCCAATTTCAAGCAAACTACTCCGCGACAGCATCCA
AGGTCCCCTCCCCGACTAGCCAACCCGGCGATGACGACTTCATACCTCCG
ACGCTAGACCGACCTATCGGATCGGTAATCCCACCCAAGGAAGGACAGAA
CACGGGTGTCGATGACCGCTCTATACGACAGAGGAGAGATGATTTCGTGA
ACTACGAGAGACATCTTGAGCGGCGGAAGGAATTGTACGACCCCATTTAT
TTCCTAAGCCTATACTCCTTATACAATTTCTAATCAAGTCTCGATGATAA
ACTATAGAACCCGACAAGTCGCAAAGCCCTACTTCCGCGAATGGTCCAAC
ATGCGCTACCACGAAGGCAAAACCTTCATGTCGAACCCCCGCCTCTTCAA
GCGCGACAAGGCCCTCTACTTCCCCAACATGCACGGCATCACTCTCGCCT
CGCCGAAAGAACCCCAGAACACGACGACTCTTTTCCGCGGCAAGATTACA
ATCGTGAACCTCTTCTCGAGCGTGTGGGCCGAGTCGCAGGTCGTTACCTT
CACAGGCAAGGAGCAGAACCCCGGTCTGTGGGAGACGATTGCCGCGGAGG
GAGACGGCATGGTGCAGAAGGTTGATATCAACTTGGAGGAGAATGCGTTG
AAGGCCGGCCTGGTTAAGATGTTCATGTGGCGTATGCGGGCAAAGTTGCC
GCAGGAGCAGCATGAACGGTACTTCCTGGTGCGGAAGGGATTGGATGATG
GATTGAAGGAGAGTATTGGGATGTTGAACTCGAAGGTGGGGTATGTGTAT
TTGTTGGACGAGAACTGTCGCATTCGGTGGGCGGGCAGTGGGCCTGCTGA
GAAGGAGGAGTTGGAGGCACTGAATAATGGGGTGCGCAAGTTGGTGCAGG
AGAAGAAGGTCAGTTTGCAGTCGGAGATGCCGGCGCAGGAGTGGGATGCT
GCGAGGGGTCAGGGTGAAGCTGTGAAGAAGCCTCGTGTTGTTATGCCCTA
G
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2733460..2734660-

>ATCC64974_104390-T1 ID=ATCC64974_104390-T1|Name=ATCC64974_104390-T1|organism=Aspergillus niger N402|type=CDS|length=2256bp|location=Sequence derived from alignment at OGUI01000017.1:2733460..2734660- (Aspergillus niger N402)
AACCCGACAAGTCGCAAAGCCCTACTTCCGCGAATGGTCCAACATGCGCT
ACCACGAAGGCAAAACCTTCATGTCGAACCCCCGCCTCTTCAAGCGCGAC
AAGGCCCTCTACTTCCCCAACATGCACGGCATCACTCTCGCCTCGCCGAA
AGAACCCCAGAACACGACGACTCTTTTCCGCGGCAAGATTACAATCGTGA
ACCTCTTCTCGAGCGTGTGGGCCGAGTCGCAGGTCGTTACCTTCACAGGC
AAGGAGCAGAACCCCGGTCTGTGGGAGACGATTGCCGCGGAGGGAGACGG
CATGGTGCAGAAGGTTGATATCAACTTGGAGGAGAATGCGTTGAAGGCCG
GCCTGGTTAAGATGTTCATGTGGCGTATGCGGGCAAAGTTGCCGCAGGAG
CAGCATGAACGGTACTTCCTGGTGCGGAAGGGATTGGATGATGGATTGAA
GGAGAGTATTGGGATGTTGAACTCGAAGGTGGGGTATGTGTATTTGTTGG
ACGAGAACTGTCGCATTCGGTGGGCGGGCAGTGGGCCTGCTGAGAAGGAG
GAGTTGGAGGCACTGAATAATGGGGTGCGCAAGTTGGTGCAGGAGAAGAA
GGTCAGTTTGCAGTCGGAGATGCCGGCGCAGGAGTGGGATGCTGCGAGGG
GTCAGGGTGAAGCTGTGAAGAAGCCTCGTGTTGTTATGCCCTAGATGTGG
AAGCGCACGGGGCTTCTAGCCTCATTAACTGAGCCGACGCTCCTCCAGAA
CACTCGTTGCCTAAGTTGCCAATTGCGCAATGCGGCCGCACTCCGGCCCC
GAACCGCTGCGCTGCGTTACTACGCCAGCAAACCCGACACCAGCAGCGAA
ACCAAGCCAAAAACACCCTCCCCCATCGCATCTCTCGCAAGCAAGACCAA
CAGAGTAGCCCAATTTCAAGCAAACTACTCCGCGACAGCATCCAAGGTCC
CCTCCCCGACTAGCCAACCCGGCGATGACGACTTCATACCTCCGACGCTA
GACCGACCTATCGGATCGGTAATCCCACCCAAGGAAGGACAGAACACGGG
TGTCGATGACCGCTCTATACGACAGAGGAGAGATGATTTCGTGAACTACG
AGAGACATCTTGAGCGGCGGAAGGAATTAACCCGACAAGTCGCAAAGCCC
TACTTCCGCGAATGGTCCAACATGCGCTACCACGAAGGCAAAACCTTCAT
GTCGAACCCCCGCCTCTTCAAGCGCGACAAGGCCCTCTACTTCCCCAACA
TGCACGGCATCACTCTCGCCTCGCCGAAAGAACCCCAGAACACGACGACT
CTTTTCCGCGGCAAGATTACAATCGTGAACCTCTTCTCGAGCGTGTGGGC
CGAGTCGCAGGTCGTTACCTTCACAGGCAAGGAGCAGAACCCCGGTCTGT
GGGAGACGATTGCCGCGGAGGGAGACGGCATGGTGCAGAAGGTTGATATC
AACTTGGAGGAGAATGCGTTGAAGGCCGGCCTGGTTAAGATGTTCATGTG
GCGTATGCGGGCAAAGTTGCCGCAGGAGCAGCATGAACGGTACTTCCTGG
TGCGGAAGGGATTGGATGATGGATTGAAGGAGAGTATTGGGATGTTGAAC
TCGAAGGTGGGGTATGTGTATTTGTTGGACGAGAACTGTCGCATTCGGTG
GGCGGGCAGTGGGCCTGCTGAGAAGGAGGAGTTGGAGGCACTGAATAATG
GGGTGCGCAAGTTGGTGCAGGAGAAGAAGGTCAGTTTGCAGTCGGAGATG
CCGGCGCAGGAGTGGGATGCTGCGAGGGGTCAGGGTGAAGCTGTGAAGAA
GCCTCGTGTTGTTATGCCCTAGATGTGGAAGCGCACGGGGCTTCTAGCCT
CATTAACTGAGCCGACGCTCCTCCAGAACACTCGTTGCCTAAGTTGCCAA
TTGCGCAATGCGGCCGCACTCCGGCCCCGAACCGCTGCGCTGCGTTACTA
CGCCAGCAAACCCGACACCAGCAGCGAAACCAAGCCAAAAACACCCTCCC
CCATCGCATCTCTCGCAAGCAAGACCAACAGAGTAGCCCAATTTCAAGCA
AACTACTCCGCGACAGCATCCAAGGTCCCCTCCCCGACTAGCCAACCCGG
CGATGACGACTTCATACCTCCGACGCTAGACCGACCTATCGGATCGGTAA
TCCCACCCAAGGAAGGACAGAACACGGGTGTCGATGACCGCTCTATACGA
CAGAGGAGAGATGATTTCGTGAACTACGAGAGACATCTTGAGCGGCGGAA
GGAATT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_104390ATCC64974_104390Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104390-T1ATCC64974_104390-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104390-T1.cdsATCC64974_104390-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_104390-T1.exon2ATCC64974_104390-T1.exon2Aspergillus niger N402exon
ATCC64974_104390-T1.exon1ATCC64974_104390-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263UN3
DBxrefInterPro:IPR007849
DBxrefPFAM:PF05176
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2733460..2734660 -
Powered by Drupal